Are HPV vaccines ‘evolution-proof’? Multilevel evolutionary ecology of human oncoviruses

Publications

Treating symptomatic infections and the co-evolution of virulence and drug resistance

Author(s): Samuel Alizon
Published in: Peer Community Journal, Issue 1, 2021, Page(s) e47, ISSN 2804-3871
Publisher: Centre Mersenne
DOI: 10.24072/pcjournal.38

Reconstructing contact network structure and cross-immunity patterns from multiple infection histories

Author(s): Christian Selinger, Samuel Alizon
Published in: PLOS Computational Biology, Issue 17/9, 2021, Page(s) e1009375, ISSN 1553-7358
Publisher: PLoS
DOI: 10.1371/journal.pcbi.1009375

Does exposure to different menstrual products affect the vaginal environment?

Author(s): Nicolas Tessandier; Ilkay Başak Uysal; Baptiste Elie; Christian Selinger; Claire Bernat; Vanina Boué; Sophie Grasset; Soraya Groc; Massilva Rahmoun; Bastien Reyné; Noemi Bender; Marine Bonneau; Christelle Graf; Vincent Tribout; Vincent Foulongne; Jacques Ravel; Tim Waterboer; Christophe Hirtz; Ignacio G. Bravo; Jacques Reynes; Michel Segondy; Carmen Lia Murall; Nathalie Boulle; Tsukushi Kamiya;
Published in: Molecular Ecology, Issue 32(10), 2023, Page(s) 2592-2601, ISSN 1365-294X
Publisher: Wiley-Blackwell
DOI: 10.1111/mec.16678

Concomitant and productive genital infections by HSV-2 and HPV in two young women: A case report

Author(s): Ilkay Başak Uysal; Vanina Boué; Carmen Lia Murall; Christelle Graf; Christian Selinger; Christophe Hirtz; Claire Bernat; Jacques Ravel; Jacques Reynes; Marine Bonneau; Massilva Rahmoun; Michel Segondy; Nathalie Boulle; Sophie Grasset; Soraya Groc; Tim Waterboer; Vincent Tribout; Ignacio G. Bravo; Sonia Burrel; Vincent Foulongne; Samuel Alizon; Nicolas Tessandier
Published in: IDCases, Issue 30, 2023, Page(s) e01604, ISSN 2214-2509
Publisher: Elsevier
DOI: 10.31219/osf.io/u349m

HPV cervical infections and serological status in vaccinated and unvaccinated women

Author(s): Carmen Lía Murall, Bastien Reyné, Christian Selinger, Claire Bernat, Vanina Boué, Sophie Grasset, Soraya Groc, Massilva Rahmoun, Noemi Bender, Marine Bonneau, Vincent Foulongne, Christelle Graf, Eric Picot, Marie-Christine Picot, Vincent Tribout, Tim Waterboer, Ignacio G Bravo, Jacques Reynes, Michel Segondy, Nathalie Boulle, Samuel Alizon
Published in: Vaccine, Issue 38/51, 2020, Page(s) 8167-8174, ISSN 0264-410X
Publisher: Elsevier BV
DOI: 10.1016/j.vaccine.2020.10.078

Cytokine response following perturbation of the cervicovaginal milieu during HPV genital infection

Author(s): Christian Selinger, Massilva Rahmoun, Carmen Lia Murall, Claire Bernat, Vanina Boué, Marine Bonneau, Christelle Graf, Sophie Grasset, Soraya Groc, Jacques Reynes, Christophe Hirtz, Nathalie Jacobs, Samuel Alizon
Published in: Immunologic Research, Issue 69/3, 2021, Page(s) 255-263, ISSN 0257-277X
Publisher: Humana Press, Inc.
DOI: 10.1007/s12026-021-09196-2

Reconciling Pasteur and Darwin to control infectious diseases

Author(s): Samuel Alizon, Pierre-Olivier Méthot
Published in: PLOS Biology, Issue 16/1, 2018, Page(s) e2003815, ISSN 1545-7885
Publisher: Public Library of Science
DOI: 10.1371/journal.pbio.2003815

Why Human Papillomavirus Acute Infections Matter

Author(s): Samuel Alizon, Carmen Murall, Ignacio Bravo
Published in: Viruses, Issue 9/12, 2017, Page(s) 293, ISSN 1999-4915
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/v9100293

Coevolution of virulence and immunosuppression in multiple infections

Author(s): Tsukushi Kamiya, Nicole Mideo, Samuel Alizon
Published in: Journal of Evolutionary Biology, Issue 31/7, 2018, Page(s) 995-1005, ISSN 1010-061X
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/jeb.13280

Epithelial stratification shapes infection dynamics

Author(s): Carmen Lía Murall, Robert Jackson, Ingeborg Zehbe, Nathalie Boulle, Michel Segondy, Samuel Alizon
Published in: PLOS Computational Biology, Issue 15/1, 2019, Page(s) e1006646, ISSN 1553-7358
Publisher: Public Library of Science
DOI: 10.1371/journal.pcbi.1006646

Modelling the evolution of viral oncogenesis

Author(s): Carmen Lía Murall, Samuel Alizon
Published in: Philosophical Transactions of the Royal Society B: Biological Sciences, Issue 374/1773, 2019, Page(s) 20180302, ISSN 0962-8436
Publisher: Royal Society of London
DOI: 10.1098/rstb.2018.0302

Natural history, dynamics, and ecology of human papillomaviruses in genital infections of young women: protocol of the PAPCLEAR cohort study

Author(s): Carmen Lía Murall, Massilva Rahmoun, Christian Selinger, Monique Baldellou, Claire Bernat, Marine Bonneau, Vanina Boué, Mathilde Buisson, Guillaume Christophe, Giuseppe D’Auria, Florence De Taroni, Vincent Foulongne, Rémy Froissart, Christelle Graf, Sophie Grasset, Soraya Groc, Christophe Hirtz, Audrey Jaussent, Julie Lajoie, Frédérique Lorcy, Eric Picot, Marie-Christine Picot, Jacques Rave
Published in: BMJ Open, Issue 9/6, 2019, Page(s) e025129, ISSN 2044-6055
Publisher: BMJ Publishing Group
DOI: 10.1136/bmjopen-2018-025129

Detecting within-host interactions from genotype combination prevalence data

Author(s): Samuel Alizon, Carmen Lía Murall, Emma Saulnier, Mircea T. Sofonea
Published in: Epidemics, Issue 29, 2019, Page(s) 100349, ISSN 1755-4365
Publisher: Elsevier BV
DOI: 10.1016/j.epidem.2019.100349

Episome partitioning and symmetric cell divisions: Quantifying the role of random events in the persistence of HPV infections

Author(s): Thomas Beneteau, Christian Selinger, Mircea T. Sofonea, Samuel Alizon
Published in: PLOS Computational Biology, Issue 17/9, 2021, Page(s) e1009352, ISSN 1553-7358
Publisher: PLoS
DOI: 10.1371/journal.pcbi.1009352

Invasions of Host-Associated Microbiome Networks

Author(s): C.L. Murall, J.L. Abbate, M. Puelma Touzel, E. Allen-Vercoe, S. Alizon, R. Froissart, K. McCann
Published in: Advances in Ecological Modeling, Issue 57, 2017, Page(s) 201-281
Publisher: Elsevier
DOI: 10.1016/bs.aecr.2016.11.002

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