Microbiology of extremely acidic terrestrial volcanic ecosystems

Publications

Methylacidimicrobium thermophilum AP8, a Novel Methane- and Hydrogen-Oxidizing Bacterium Isolated From Volcanic Soil on Pantelleria Island, Italy

Author(s): Nunzia Picone, Pieter Blom, Anna J. Wallenius, Carmen Hogendoorn, Rob Mesman, Geert Cremers, Antonina L. Gagliano, Walter D’Alessandro, Paola Quatrini, Mike S. M. Jetten, Arjan Pol, Huub J. M. Op den Camp
Published in: Frontiers in Microbiology, Issue 12, 2021, ISSN 1664-302X
Publisher: Frontiers Media
DOI: 10.3389/fmicb.2021.637762

Methanol production by Methylacidiphilum fumariolicum SolV under different growth conditions

Author(s): Carmen Hogendoorn, Arjan Pol, Guylaine H. L. Nuijten, Huub J. M. Op den Camp
Published in: Applied and Environmental Microbiology, 2020, ISSN 0099-2240
Publisher: American Society for Microbiology
DOI: 10.1128/aem.01188-20

Nutrient Limitation Causes Differential Expression of Transport- and Metabolism Genes in the Compartmentalized Anammox Bacterium Kuenenia stuttgartiensis

Author(s): Marjan J. Smeulders, Stijn H. Peeters, Theo van Alen, Daan de Bruijckere, Guylaine H. L. Nuijten, Huub J. M. op den Camp, Mike S. M. Jetten, Laura van Niftrik
Published in: Frontiers in Microbiology, Issue 11, 2020, ISSN 1664-302X
Publisher: Frontiers Media
DOI: 10.3389/fmicb.2020.01959

The thermoacidophilic methanotroph Methylacidiphilum fumariolicum SolV oxidizes subatmospheric H2 with a high-affinity, membrane-associated [NiFe] hydrogenase

Author(s): Rob A. Schmitz, Arjan Pol, Sepehr S. Mohammadi, Carmen Hogendoorn, Antonie H. van Gelder, Mike S. M. Jetten, Lena J. Daumann, Huub J. M. Op den Camp
Published in: The ISME Journal, Issue 14/5, 2020, Page(s) 1223-1232, ISSN 1751-7362
Publisher: Nature Publishing Group
DOI: 10.1038/s41396-020-0609-3

Diversity of isoprene-degrading bacteria in phyllosphere and soil communities from a high isoprene-emitting environment: a Malaysian oil palm plantation

Author(s): Ornella Carrión, Lisa Gibson, Dafydd M. O. Elias, Niall P. McNamara, Theo A. van Alen, Huub J. M. Op den Camp, Christina Vimala Supramaniam, Terry J. McGenity, J. Colin Murrell
Published in: Microbiome, Issue 8/1, 2020, ISSN 2049-2618
Publisher: Springer Nature
DOI: 10.1186/s40168-020-00860-7

Key Physiology of a Nitrite-Dependent Methane-Oxidizing Enrichment Culture

Author(s): Simon Guerrero-Cruz, Karin Stultiens, Maartje A. H. J. van Kessel, Wouter Versantvoort, Mike S. M. Jetten, Huub J. M. Op den Camp, Boran Kartal
Published in: Applied and Environmental Microbiology, Issue 85/8, 2019, ISSN 0099-2240
Publisher: American Society for Microbiology
DOI: 10.1128/aem.00124-19

Verrucomicrobial methanotrophs: ecophysiology of metabolically versatile acidophiles

Author(s): Rob A Schmitz, Stijn H Peeters, Wouter Versantvoort, Nunzia Picone, Arjan Pol, Mike S M Jetten, Huub J M Op den Camp
Published in: FEMS Microbiology Reviews, 2021, ISSN 1574-6976
Publisher: Oxford University Press
DOI: 10.1093/femsre/fuab007

Ammonia oxidation at pH 2.5 by a new gammaproteobacterial ammonia-oxidizing bacterium

Author(s): Nunzia Picone, Arjan Pol, Rob Mesman, Maartje A. H. J. van Kessel, Geert Cremers, Antonie H. van Gelder, Theo A. van Alen, Mike S. M. Jetten, Sebastian Lücker, Huub J. M. Op den Camp
Published in: The ISME Journal, 2020, ISSN 1751-7362
Publisher: Nature Publishing Group
DOI: 10.1038/s41396-020-00840-7

Draft Genome Sequences of Two Acidophilic, Mesophilic Verrucomicrobial Methanotrophs Contain Only One pmoCAB Operon

Author(s): Geert Cremers, Arjan Pol, Mike S. M. Jetten, Huub J. M. Op den Camp
Published in: Microbiology Resource Announcements, Issue 9/16, 2020, ISSN 2576-098X
Publisher: ASM
DOI: 10.1128/mra.00315-20

Characterization of a novel cytochrome c as the electron acceptor of XoxF-MDH in the thermoacidophilic methanotroph Methylacidiphilum fumariolicum SolV

Author(s): Wouter Versantvoort, Arjan Pol, Lena J. Daumann, James A. Larrabee, Aidan H. Strayer, Mike S.M. Jetten, Laura van Niftrik, Joachim Reimann, Huub J.M. Op den Camp
Published in: Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics, Issue 1867/6, 2019, Page(s) 595-603, ISSN 1570-9639
Publisher: Elsevier BV
DOI: 10.1016/j.bbapap.2019.04.001

Complete Genome Sequence of the Aerobic Facultative Methanotroph Methylocella tundrae Strain T4

Author(s): Martine A. R. Kox, Muhammad Farhan Ul Haque, Theo A. van Alen, Andrew T. Crombie, Mike S. M. Jetten, Huub J. M. Op den Camp, Svetlana N. Dedysh, Maartje A. H. J. van Kessel, J. Colin Murrell
Published in: Microbiology Resource Announcements, Issue 8/20, 2019, ISSN 2576-098X
Publisher: ASM
DOI: 10.1128/mra.00286-19

Hydrogen and Carbon Monoxide-Utilizing Kyrpidia spormannii Species From Pantelleria Island, Italy

Author(s): Carmen Hogendoorn, Arjan Pol, Nunzia Picone, Geert Cremers, Theo A. van Alen, Antonina L. Gagliano, Mike S. M. Jetten, Walter D’Alessandro, Paola Quatrini, Huub J. M. Op den Camp
Published in: Frontiers in Microbiology, Issue 11, 2020, ISSN 1664-302X
Publisher: Frontiers Media
DOI: 10.3389/fmicb.2020.00951

Diversity, enrichment, and genomic potential of anaerobic methane- and ammonium-oxidizing microorganisms from a brewery wastewater treatment plant

Author(s): Karin Stultiens, Maartje A.H.J. van Kessel, Jeroen Frank, Peter Fischer, Chris Pelzer, Theo A. van Alen, Boran Kartal, Huub J.M. Op den Camp, Mike S.M. Jetten
Published in: Applied Microbiology and Biotechnology, Issue 104/16, 2020, Page(s) 7201-7212, ISSN 0175-7598
Publisher: Springer Verlag
DOI: 10.1007/s00253-020-10748-z

Structure of the 4-hydroxy-tetrahydrodipicolinate synthase from the thermoacidophilic methanotroph Methylacidiphilum fumariolicum SolV and the phylogeny of the aminotransferase pathway

Author(s): Rob A. Schmitz, Andreas Dietl, Melanie Müller, Tom Berben, Huub J. M. Op den Camp, Thomas R. M. Barends
Published in: Acta Crystallographica Section F Structural Biology Communications, Issue 76/5, 2020, Page(s) 199-208, ISSN 2053-230X
Publisher: John Wiley and Sons Ltd
DOI: 10.1107/s2053230x20005294

More Than a Methanotroph: A Broader Substrate Spectrum for Methylacidiphilum fumariolicum SolV

Author(s): Nunzia Picone, Sepehr S. Mohammadi, Annemiek C. Waajen, Theo A. van Alen, Mike S. M. Jetten, Arjan Pol, Huub J. M. Op den Camp
Published in: Frontiers in Microbiology, Issue 11, 2020, ISSN 1664-302X
Publisher: Frontiers Media
DOI: 10.3389/fmicb.2020.604485

Interactions between anaerobic ammonium- and methane-oxidizing microorganisms in a laboratory-scale sequencing batch reactor

Author(s): Karin Stultiens, Simon Guerrero Cruz, Maartje A. H. J. van Kessel, Mike S. M. Jetten, Boran Kartal, Huub J. M. Op den Camp
Published in: Applied Microbiology and Biotechnology, Issue 103/16, 2019, Page(s) 6783-6795, ISSN 0175-7598
Publisher: Springer Verlag
DOI: 10.1007/s00253-019-09976-9

Metagenomic profiling of ammonia- and methane-oxidizing microorganisms in two sequential rapid sand filters

Author(s): Lianna Poghosyan, Hanna Koch, Jeroen Frank, Maartje A.H.J. van Kessel, Geert Cremers, Theo van Alen, Mike S.M. Jetten, Huub J.M. Op den Camp, Sebastian Lücker
Published in: Water Research, Issue 185, 2020, Page(s) 116288, ISSN 0043-1354
Publisher: Elsevier BV
DOI: 10.1016/j.watres.2020.116288

Understanding the chemistry of the artificial electron acceptors PES, PMS, DCPIP and Wurster’s Blue in methanol dehydrogenase assays

Author(s): Bérénice Jahn, Niko S. W. Jonasson, Hurina Hu, Helena Singer, Arjan Pol, Nathan M. Good, Huub J. M. Op den Camp, N. Cecilia Martinez-Gomez, Lena J. Daumann
Published in: JBIC Journal of Biological Inorganic Chemistry, Issue 25/2, 2020, Page(s) 199-212, ISSN 0949-8257
Publisher: Springer Verlag
DOI: 10.1007/s00775-020-01752-9

Resolving the complete genome of Kuenenia stuttgartiensis from a membrane bioreactor enrichment using Single-Molecule Real-Time sequencing

Author(s): Jeroen Frank, Sebastian Lücker, Rolf H. A. M. Vossen, Mike S. M. Jetten, Richard J. Hall, Huub J. M. Op den Camp, Seyed Yahya Anvar
Published in: Scientific Reports, Issue 8/1, 2018, ISSN 2045-2322
Publisher: Nature Publishing Group
DOI: 10.1038/s41598-018-23053-7

Bioreactor virome metagenomics sequencing using DNA spike-ins

Author(s): Geert Cremers, Lavinia Gambelli, Theo van Alen, Laura van Niftrik, Huub J.M. Op den Camp
Published in: PeerJ, Issue 6, 2018, Page(s) e4351, ISSN 2167-8359
Publisher: PeerJ
DOI: 10.7717/peerj.4351

Mutations in SELENBP1, encoding a novel human methanethiol oxidase, cause extraoral halitosis

Author(s): Arjan Pol, G. Herma Renkema, Albert Tangerman, Edwin G. Winkel, Udo F. Engelke, Arjan P. M. de Brouwer, Kent C. Lloyd, Renee S. Araiza, Lambert van den Heuvel, Heymut Omran, Heike Olbrich, Marijn Oude Elberink, Christian Gilissen, Richard J. Rodenburg, Jörn Oliver Sass, K. Otfried Schwab, Hendrik Schäfer, Hanka Venselaar, J. Silvia Sequeira, Huub J. M. Op den Camp, Ron A. Wevers
Published in: Nature Genetics, Issue 50/1, 2018, Page(s) 120-129, ISSN 1061-4036
Publisher: Nature Publishing Group
DOI: 10.1038/s41588-017-0006-7

Bacterial SBP56 identified as a Cu-dependent methanethiol oxidase widely distributed in the biosphere

Author(s): Özge Eyice, Nataliia Myronova, Arjan Pol, Ornella Carrión, Jonathan D Todd, Tom J Smith, Stephen J Gurman, Adam Cuthbertson, Sophie Mazard, Monique ASH Mennink-Kersten, Timothy DH Bugg, Karl Kristoffer Andersson, Andrew WB Johnston, Huub JM Op den Camp, Hendrik Schäfer
Published in: The ISME Journal, Issue 12/1, 2017, Page(s) 145-160, ISSN 1751-7362
Publisher: Nature Publishing Group
DOI: 10.1038/ismej.2017.148

Facile Arsenazo III-Based Assay for Monitoring Rare Earth Element Depletion from Cultivation Media for Methanotrophic and Methylotrophic Bacteria

Author(s): Carmen Hogendoorn, Paula Roszczenko-Jasińska, N. Cecilia Martinez-Gomez, Johann de Graaff, Patrick Grassl, Arjan Pol, Huub J. M. Op den Camp, Lena J. Daumann
Published in: Applied and Environmental Microbiology, Issue 84/8, 2018, ISSN 0099-2240
Publisher: American Society for Microbiology
DOI: 10.1128/AEM.02887-17

Ammonia Oxidation and Nitrite Reduction in the Verrucomicrobial Methanotroph Methylacidiphilum fumariolicum SolV

Author(s): Sepehr S. Mohammadi, Arjan Pol, Theo van Alen, Mike S. M. Jetten, Huub J. M. Op den Camp
Published in: Frontiers in Microbiology, Issue 8, 2017, ISSN 1664-302X
Publisher: Frontiers Media
DOI: 10.3389/fmicb.2017.01901

Mimicking microbial interactions under nitrate-reducing conditions in an anoxic bioreactor: enrichment of novel Nitrospirae bacteria distantly related to Thermodesulfovibrio

Author(s): Arslan Arshad, Paula Dalcin Martins, Jeroen Frank, Mike S. M. Jetten, Huub J. M. Op den Camp, Cornelia U. Welte
Published in: Environmental Microbiology, Issue 19/12, 2017, Page(s) 4965-4977, ISSN 1462-2912
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/1462-2920.13977

Author(s): Bérénice Jahn, Arjan Pol, Henning Lumpe, Thomas R. M. Barends, Andreas Dietl, Carmen Hogendoorn, Huub J. M. Op den Camp, Lena J. Daumann
Published in: ChemBioChem, Issue 19/11, 2018, Page(s) 1147-1153, ISSN 1439-4227
Publisher: John Wiley & Sons Ltd.
DOI: 10.1002/cbic.201800130

Impact of the lanthanide contraction on the activity of a lanthanide-dependent methanol dehydrogenase – a kinetic and DFT study

Author(s): Henning Lumpe, Arjan Pol, Huub J. M. Op den Camp, Lena J. Daumann
Published in: Dalton Transactions, Issue 47/31, 2018, Page(s) 10463-10472, ISSN 1477-9226
Publisher: Royal Society of Chemistry
DOI: 10.1039/c8dt01238e

Current perspectives on the application of N-damo and anammox in wastewater treatment

Author(s): Maartje AHJ van Kessel, Karin Stultiens, Monique FW Slegers, Simon Guerrero Cruz, Mike SM Jetten, Boran Kartal, Huub JM Op den Camp
Published in: Current Opinion in Biotechnology, Issue 50, 2018, Page(s) 222-227, ISSN 0958-1669
Publisher: Elsevier BV
DOI: 10.1016/j.copbio.2018.01.031

Comparative Genomics of Candidatus Methylomirabilis Species and Description of Ca. Methylomirabilis Lanthanidiphila

Author(s): Wouter Versantvoort, Simon Guerrero-Cruz, Daan R. Speth, Jeroen Frank, Lavinia Gambelli, Geert Cremers, Theo van Alen, Mike S. M. Jetten, Boran Kartal, Huub J. M. Op den Camp, Joachim Reimann
Published in: Frontiers in Microbiology, Issue 9, 2018, ISSN 1664-302X
Publisher: Frontiers Media
DOI: 10.3389/fmicb.2018.01672

Community Composition and Ultrastructure of a Nitrate-Dependent Anaerobic Methane-Oxidizing Enrichment Culture

Author(s): Lavinia Gambelli, Simon Guerrero-Cruz, Rob J. Mesman, Geert Cremers, Mike S. M. Jetten, Huub J. M. Op den Camp, Boran Kartal, Claudia Lueke, Laura van Niftrik
Published in: Applied and Environmental Microbiology, Issue 84/3, 2018, ISSN 0099-2240
Publisher: American Society for Microbiology
DOI: 10.1128/AEM.02186-17

Nitrate- and nitrite-dependent anaerobic oxidation of methane

Author(s): Cornelia U. Welte, Olivia Rasigraf, Annika Vaksmaa, Wouter Versantvoort, Arslan Arshad, Huub J.M. Op den Camp, Mike S.M. Jetten, Claudia Lüke, Joachim Reimann
Published in: Environmental Microbiology Reports, Issue 8/6, 2016, Page(s) 941-955, ISSN 1758-2229
Publisher: Wiley-Blackwell
DOI: 10.1111/1758-2229.12487

New Methyloceanibacter diversity from North Sea sediments includes methanotroph containing solely the soluble methane monooxygenase

Author(s): Bram Vekeman, Frederiek-Maarten Kerckhof, Geert Cremers, Paul de Vos, Peter Vandamme, Nico Boon, Huub J.M. Op den Camp, Kim Heylen
Published in: Environmental Microbiology, Issue 18/12, 2016, Page(s) 4523-4536, ISSN 1462-2912
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/1462-2920.13485

Ultrastructure and Viral Metagenome of Bacteriophages from an Anaerobic Methane Oxidizing Methylomirabilis Bioreactor Enrichment Culture

Author(s): Lavinia Gambelli, Geert Cremers, Rob Mesman, Simon Guerrero, Bas E. Dutilh, Mike S. M. Jetten, Huub J. M. Op den Camp, Laura van Niftrik
Published in: Frontiers in Microbiology, Issue 7, 2016, ISSN 1664-302X
Publisher: Frontiers Media
DOI: 10.3389/fmicb.2016.01740

Methylacidiphilum fumariolicum SolV, a thermoacidophilic ‘Knallgas’ methanotroph with both an oxygen-sensitive and -insensitive hydrogenase

Author(s): Sepehr Mohammadi, Arjan Pol, Theo A van Alen, Mike SM Jetten, Huub JM Op den Camp
Published in: The ISME Journal, Issue 11/4, 2016, Page(s) 945-958, ISSN 1751-7362
Publisher: Nature Publishing Group
DOI: 10.1038/ismej.2016.171

Draft Genome Sequence of a Novel Methylobacterium brachiatum Strain Isolated from Human Skin

Author(s): Geert Cremers, Angelique Kenyon, Niels Gubbels, Matthijs Jansen, Theo A. van Alen, Tom Berben, Huub J. M. Op den Camp
Published in: Microbiology Resource Announcements, Issue 9/50, 2020, ISSN 2576-098X
Publisher: American Society for Microbiology
DOI: 10.1128/mra.01093-20

Response of the Anaerobic Methanotroph “ Candidatus Methanoperedens nitroreducens” to Oxygen Stress

Author(s): Simon Guerrero-Cruz, Geert Cremers, Theo A. van Alen, Huub J. M. Op den Camp, Mike S. M. Jetten, Olivia Rasigraf, Annika Vaksmaa
Published in: Applied and Environmental Microbiology, Issue 84/24, 2018, ISSN 0099-2240
Publisher: American Society for Microbiology
DOI: 10.1128/aem.01832-18

Draft genome of a novel methanotrophic Methylobacter sp. from the volcanic soils of Pantelleria Island

Author(s): Carmen Hogendoorn, Nunzia Picone, Femke van Hout, Sophie Vijverberg, Lianna Poghosyan, Theo A. van Alen, Jeroen Frank, Arjan Pol, Antonia L. Gagliano, Mike S. M. Jetten, Walter D’Alessandro, Paola Quatrini, Huub J. M. Op den Camp
Published in: Antonie van Leeuwenhoek, Issue 114/3, 2021, Page(s) 313-324, ISSN 0003-6072
Publisher: Kluwer Academic Publishers
DOI: 10.1007/s10482-021-01525-7

Role of rare earth elements in methanol oxidation

Author(s): Nunzia Picone, Huub JM Op den Camp
Published in: Current Opinion in Chemical Biology, Issue 49, 2019, Page(s) 39-44, ISSN 1367-5931
Publisher: Elsevier BV
DOI: 10.1016/j.cbpa.2018.09.019

The Acidophilic Methanotroph Methylacidimicrobium tartarophylax 4AC Grows as Autotroph on H2 Under Microoxic Conditions

Author(s): Sepehr S. Mohammadi, Rob A. Schmitz, Arjan Pol, Tom Berben, Mike S. M. Jetten, Huub J. M. Op den Camp
Published in: Frontiers in Microbiology, Issue 10, 2019, ISSN 1664-302X
Publisher: Frontiers Media
DOI: 10.3389/fmicb.2019.02352

Geothermal Gases Shape the Microbial Community of the Volcanic Soil of Pantelleria, Italy

Author(s): Nunzia Picone, Carmen Hogendoorn, Geert Cremers, Lianna Poghosyan, Arjan Pol, Theo A. van Alen, Antonina L. Gagliano, Walter D’Alessandro, Paola Quatrini, Mike S. M. Jetten, Huub J. M. Op den Camp, Tom Berben
Published in: mSystems, Issue 5/6, 2020, Page(s) 1-17, ISSN 2379-5077
Publisher: American Society for Microbiology
DOI: 10.1128/msystems.00517-20

Interactions of anaerobic ammonium oxidizers and sulfide-oxidizing bacteria in a substrate-limited model system mimicking the marine environment

Author(s): Lina Russ, Theo A van Alen, Mike S M Jetten, Huub J M Op den Camp, Boran Kartal
Published in: FEMS Microbiology Ecology, Issue 95/9, 2019, ISSN 1574-6941
Publisher: FEMS
DOI: 10.1093/femsec/fiz137

Electrocatalysis of a Europium‐Dependent Bacterial Methanol Dehydrogenase with Its Physiological Electron‐Acceptor Cytochrome c GJ

Author(s): Palraj Kalimuthu, Lena J. Daumann, Arjan Pol, Huub J. M. Op den Camp, Paul V. Bernhardt
Published in: Chemistry – A European Journal, 2019, ISSN 0947-6539
Publisher: John Wiley & Sons Ltd.
DOI: 10.1002/chem.201900525

Multiheme hydroxylamine oxidoreductases produce NO during ammonia oxidation in methanotrophs

Author(s): Wouter Versantvoort, Arjan Pol, Mike S. M. Jetten, Laura van Niftrik, Joachim Reimann, Boran Kartal, Huub J. M. Op den Camp
Published in: Proceedings of the National Academy of Sciences, Issue 117/39, 2020, Page(s) 24459-24463, ISSN 0027-8424
Publisher: National Academy of Sciences
DOI: 10.1073/pnas.2011299117

Several ways one goal—methanogenesis from unconventional substrates

Author(s): Julia M. Kurth, Huub J. M. Op den Camp, Cornelia U. Welte
Published in: Applied Microbiology and Biotechnology, Issue 104/16, 2020, Page(s) 6839-6854, ISSN 0175-7598
Publisher: Springer Verlag
DOI: 10.1007/s00253-020-10724-7

Growth on Carbohydrates from Carbonaceous Meteorites Alters the Immunogenicity of Environment-Derived Bacterial Pathogens

Author(s): Jorge Domínguez-Andrés, Marc Eleveld, Georgios Renieris, Thomas J. Boltje, Rob J. Mesman, Laura van Niftrik, Sam J. Moons, Petra Rettberg, Jos W.M. van der Meer, Evangelos J. Giamarellos-Bourboulis, Huub J.M. Op den Camp, Marien I. de Jonge, Mihai G. Netea
Published in: Astrobiology, 2020, ISSN 1531-1074
Publisher: Mary Ann Liebert Inc.
DOI: 10.1089/ast.2019.2173

Autotrophic microorganisms in acidic volcanic ecosystems

Author(s): Carmen Hogendoorn
Published in: 2020
Publisher: Ridderprint

Novel methane- and ammonia-oxidizing microorganisms from acidic environments

Author(s): Nunzia Picone
Published in: 2020
Publisher: Proefschriftmaken.nl

One-carbon and hydrogen metabolsim of acidophilic verrucomicrobial methanotrophs

Author(s): Seyed Sepehr Mohammadi
Published in: 2017, ISBN 978-94-028-0468-3
Publisher: Ipskamp Printing

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