Deliverables
Stakeholder Forum Meeting Report two yearly events M11 and M23
Patient-related data for colorectal cancer samplesSecurity and privacy architecture
Guideline for biobanks to comply with EU in vitro diagnostics regulation
List of qualified EU biobanks
Report of the Pilot Study
Final report of WP8
Best practice document for optimal usage of omics technologies for biomarkers
Best practice document for optimal usage of omics technologies for biomarkers lead by BBMRI.fi
Report on educational and training events and toolsReport on return to investment models
Report on harmonised cost recovery process
Reports of the Advisory Committee meetings
Reports of the Advisory Committee meetings - due M7 and M19
Procedure and checklist for on-site visit evaluationReports on the access procedure
Reports on the access procedure, M24 and 36
Implementation of performance, outcome and impact indicatorsGovernance model for the sustainability of RD biobanks
Report of Country mapping in the field of biobanking
Harmonised access procedure to samples and data
Performance indicators for biobanks
Harmonised quality standards
Data set on samples from colorectal cancer patients
List of data, services, technologies/technologic platforms for each Country
Reports from meetings of the coordination activity
Yearly reports from meetings of the coordination activity M12, 24, 36
Booklet describing processes and tools in place for the operation of the Common Service ELSI for its usersBooklet describing processes and tools in place for the operation of the Common Service ELSI for its users. M6; this will be updated at M24 and M36
Ontology-based toolset for mapping of the biobanking terminologies. First revision Mo 18. Second Revision M30.
Implementation of the RD Common ServiceEthical Governance Framework and ethics check for ADOPT BBMRI-ERIC
Specify Ethical Governance Framework and adopt BBMRI-ERIC ethics check for ADOPT BBMRI-ERIC
Data matrix for characterisation of diseasesLetter of Interest of founding members of a Biomarker Expert Centre
Letter of Interest of founding members of a Biomarker Expert Centre Lead by BBMRI.at
Registry/biobank support service/ Help-desk facilityWork towards formal certification according to relevant standards
Formal certification according to relevant standards
Implementation of the BBMRI-ERIC architecture and databaseImplementation of the BBMRI-ERIC architecture and database. Second revision, following two-step design and implementation due M12 and 36.
Final reportRD Biobank section in BBMRI-ERIC catalogue
User interface for collection of the colon cancer cases and database
General annual reports
General annual reports - due month 13 and 25
Biobank connector specification and reference connector implementationAnnual workshops & reports and possible consensus statements on specific topics
Annual workshops & reports and possible consensus statements on specific topics, to be defined in collaboration with WP2, 3, 4 and 7 (M12, then yearly) expected focus year 1 : Data protection and access
Collaboration agreement with other ESFRI-BMS research infrastructures, IMI and national biomarker programsImplementation of new ELSI tools, notably procedure to enhance public debate
Setup of all bodies like the international Advisory Committee, etc.
Operational platform for sharing experience
Operational platform for sharing experience: Meeting with representatives of national/regional ethics committees dealing with biobanking research to share experience
IT-tool for monitoring compliance of biobanks with CEN TS for molecular diagnostics examinationsIT-tool for monitoring compliance of biobanks with CEN TS for molecular diagnostics examinations - lead by BBMRI.fi
Consolidated registry of BBMRI-ERIC biobanksWorkshops held within the 4 regions of primary interest M6, 12, 24, 36
Handbook user needsHandbook for biobanks to meet users’ needs for biomarker discovery, development and validation
Release of the project specific website, and adaption of the internal communication platform and mailing listsPublications
Author(s):
Anu Jalanko, Andrea Wutte, Outi Törnwall and Kurt Zatlukal
Published in:
2017
Publisher:
BBMRI-ERIC
DOI:
10.5281/zenodo.2597993
Author(s):
Georges Dagher; Petr Holub; Michael Hummel; Anu Jalanko; Outi Törnwall; Kaisa Silander; Marialuisa Lavitrano; Kurt Zatloukal; Mats Hansson; Michaela Th. Mayrhofer; Maimuna Mendy; Philip Quinlan; Irene Schlünder
Published in:
2016
Publisher:
BBMRI-ERIC
DOI:
10.5281/zenodo.823013
Author(s):
Anu Jalanko, Iiro Hämäläinen, Marialuisa Lavitrano, Kurt Zatloukal , Gert‐Jan van Ommen, Michael Hisbergues, Kyriacos Kyriacou, Annelies Debucquoy, Outi Törnwall
Published in:
2017
Publisher:
BBMRI-ERIC
DOI:
10.5281/zenodo.2598093
Author(s):
Anne Cambon-Thomsen
Published in:
2016
Publisher:
BBMRI-ERIC
DOI:
10.5281/zenodo.823029
Author(s):
Marialuisa Lavitrano, Outi Törnwall
Published in:
2016
Publisher:
BBMRI-ERIC
DOI:
10.5281/zenodo.2598072
Author(s):
Mate, Sebastian; Schüttler, Christina; Bott, Katrin; Knell, Christian; Kadioglu, Dennis; Eklund, Niina; Silander, Kaisa; Prokosch, Hans-Ulrich
Published in:
2017
Publisher:
BBMRI-ERIC
DOI:
10.5281/zenodo.844009
Author(s):
Kurt Zatloukal, Cornelia Stumptner, Christoph Schreiner
Published in:
Issue 1, 2017
Publisher:
Zenodo
DOI:
10.5281/zenodo.2598076
Author(s):
Hilde Eikemo, Berge Solberg
Published in:
2018
Publisher:
BBMRI-ERIC
DOI:
10.5281/zenodo.1305380
Author(s):
David van Enckevort
Published in:
Issue 1, 2019
Publisher:
BBMRI-ERIC
DOI:
10.5281/zenodo.3452137
Author(s):
Goisauf, Melanie; Durnová, Anna; Grewal, Jasjote; Mayrhofer, Michaela
Published in:
Issue 1, 2019
Publisher:
BBMRI-ERIC
DOI:
10.5281/zenodo.3516948
Author(s):
Jalanko, Anu; Simell, Birgit; Silander, Kaisa; Wutte, Andrea; Zatloukal, Kurt; Metspalu, Andres; Hveem, Kristian; Lavitrano, Marialuisa
Published in:
Issue 1, 2018
Publisher:
BBMRI-ERIC
DOI:
10.5281/zenodo.3506863
Author(s):
Petr Holub; David van Enckevort; Robert Reihs; Morris Swertz; Heimo Müller; Araceli DiezFraile; Michael Hummel; Jan-Eric Litton
Published in:
Issue 1, 2016
Publisher:
BBMRI-ERIC through Zenodo
DOI:
10.5281/zenodo.273550
Author(s):
Diogo Alexandre; Martin Lablans; Frank Ückert; Petr Holub; Michael Hummel; Morris Swertz; Rumyana Proynova; David van Enckevort; Jonathan Jetten
Published in:
Issue 1, 2016
Publisher:
BBMRI-ERIC
DOI:
10.5281/zenodo.273766
Author(s):
Petr Holub; Common Service IT
Published in:
Issue 1, 2016
Publisher:
BBMRI-ERIC through Zenodo
DOI:
10.5281/zenodo.159444
Author(s):
Holub, Petr; Litton, Jan-Eric; Wutte, Andrea; Törnwall, Outi; Mayrhofer, Michaela Th.; Management Committee of BBMRI-ERIC
Published in:
Issue 1, 2016
Publisher:
BBMRI-ERIC through Zenodo
DOI:
10.5281/zenodo.159416
Author(s):
Sebastian Mate; Ines Leb; Christina Schüttler; Kaisa Silander; Timo Miettinen; Juha Knuuttila; Niina Eklund; Hans-Ulrich Prokosch
Published in:
2016
Publisher:
BBMRI-ERIC
DOI:
10.5281/zenodo.165775
Author(s):
BBMRI-ERIC, BBMRI-LPC, B3Africa
Published in:
2016
Publisher:
BBMRI-ERIC
Author(s):
BBMRI-ERIC Common Service ELSI
Published in:
2017
Publisher:
BBMRI-ERIC
DOI:
10.5281/zenodo.3473120
Author(s):
MG Hansson, MK Dahlin and HC Howard
Published in:
2016
Publisher:
BBMRI-ERIC
Author(s):
Laramie Duncan, Zeynep Yilmaz, Helena Gaspar, Raymond Walters, Jackie Goldstein, Verneri Anttila, Brendan Bulik-Sullivan, Stephan Ripke, Laura Thornton, Anke Hinney, Mark Daly, Patrick F. Sullivan, Eleftheria Zeggini, Gerome Breen, Cynthia M. Bulik, Laramie Duncan, Zeynep Yilmaz, Héléna Gaspar, Raymond Walters, Jackie Goldstein, Verneri Anttila, Brendan Bulik-Sullivan, Stephan Ripke, Roger Adan,
Published in:
American Journal of Psychiatry, Issue 174/9, 2017, Page(s) 850-858, ISSN 0002-953X
Publisher:
American Psychiatric Publishing, Inc.
DOI:
10.1176/appi.ajp.2017.16121402
Author(s):
Michael H. Guo, Satish K. Nandakumar, Jacob C. Ulirsch, Seyedeh M. Zekavat, Jason D. Buenrostro, Pradeep Natarajan, Rany M. Salem, Roberto Chiarle, Mario Mitt, Mart Kals, Kalle Pärn, Krista Fischer, Lili Milani, Reedik Mägi, Priit Palta, Stacey B. Gabriel, Andres Metspalu, Eric S. Lander, Sekar Kathiresan, Joel N. Hirschhorn, Tõnu Esko, Vijay G. Sankaran
Published in:
Proceedings of the National Academy of Sciences, Issue 114/3, 2017, Page(s) E327-E336, ISSN 0027-8424
Publisher:
National Academy of Sciences
DOI:
10.1073/pnas.1619052114
Author(s):
Reedik Mägi, Momoko Horikoshi, Tamar Sofer, Anubha Mahajan, Hidetoshi Kitajima, Nora Franceschini, Mark I. McCarthy, Andrew P. Morris
Published in:
Human Molecular Genetics, Issue 26/18, 2017, Page(s) 3639-3650, ISSN 0964-6906
Publisher:
Oxford University Press
DOI:
10.1093/hmg/ddx280
Author(s):
Dmitry Shungin, Wei Q. Deng, Tibor V. Varga, Jian'an Luan, Evelin Mihailov, Andres Metspalu, Andrew P. Morris, Nita G. Forouhi, Cecilia Lindgren, Patrik K. E. Magnusson, Nancy L. Pedersen, Göran Hallmans, Audrey Y. Chu, Anne E. Justice, Mariaelisa Graff, Thomas W. Winkler, Lynda M. Rose, Claudia Langenberg, L. Adrienne Cupples, Paul M. Ridker, Nicholas J. Wareham, Ken K. Ong, Ruth J. F. Loos, Dan
Published in:
PLOS Genetics, Issue 13/6, 2017, Page(s) e1006812, ISSN 1553-7404
Publisher:
PLoS Genet. 2017 Jun; 13(6): e1006812.
DOI:
10.1371/journal.pgen.1006812
Author(s):
Petr Holub, Florian Kohlmayer, Fabian Prasser, Michaela Th. Mayrhofer, Irene Schlünder, Gillian M. Martin, Sara Casati, Lefteris Koumakis, Andrea Wutte, Łukasz Kozera, Dominik Strapagiel, Gabriele Anton, Gianluigi Zanetti, Osman Ugur Sezerman, Maimuna Mendy, Dalibor Valík, Marialuisa Lavitrano, Georges Dagher, Kurt Zatloukal, GertJan B. van Ommen, Jan-Eric Litton
Published in:
Biopreservation and Biobanking, Issue 16/2, 2018, Page(s) 97-105, ISSN 1947-5535
Publisher:
Mary Ann Liebert Inc.
DOI:
10.1089/bio.2017.0110
Author(s):
Mario Mitt, Mart Kals, Kalle Pärn, Stacey B Gabriel, Eric S Lander, Aarno Palotie, Samuli Ripatti, Andrew P Morris, Andres Metspalu, Tõnu Esko, Reedik Mägi, Priit Palta
Published in:
European Journal of Human Genetics, Issue 25/7, 2017, Page(s) 869-876, ISSN 1018-4813
Publisher:
Natue Publishing Group
DOI:
10.1038/EJHG.2017.51
Author(s):
Marika Doucet, Martin Yuille, Luke Georghiou, Georges Dagher
Published in:
Journal of Biorepository Science for Applied Medicine, Issue Volume 5, 2017, Page(s) 1-7, ISSN 2253-1785
Publisher:
Dove Press
DOI:
10.2147/bsam.s100899
Author(s):
Melanie Goisauf, Gillian Martin, Heidi Beate Bentzen, Isabelle Budin-Ljøsne, Lars Ursin, Anna Durnová, Liis Leitsalu, Katharine Smith, Sara Casati, Marialuisa Lavitrano, Deborah Mascalzoni, Martin Boeckhout, Michaela Th. Mayrhofer
Published in:
PLOS ONE, Issue 14/9, 2019, Page(s) e0221496, ISSN 1932-6203
Publisher:
Public Library of Science
DOI:
10.1371/journal.pone.0221496
Author(s):
Michaela Th. Mayrhofer and Irene Schlünder
Published in:
Biopreservation and Biobanking, Issue Volume 16, Issue 6, 2018, ISSN 1947-5535
Publisher:
Mary Ann Liebert Inc.
DOI:
10.1089/bio.2018.0018
Author(s):
Petr Holub, Morris Swertz, Robert Reihs, David van Enckevort, Heimo Müller, Jan-Eric Litton
Published in:
Biopreservation and Biobanking, Issue 14/6, 2016, Page(s) 559-562, ISSN 1947-5535
Publisher:
Mary Ann Liebert Inc.
DOI:
10.1089/bio.2016.0088
Author(s):
Rumyana Proynova, Diogo Alexandre, Martin Lablans, David Van Enckevort, Sebastian Mate, Niina Eklund, Kaisa Silander, Michael Hummel, Petr Holub, Frank Ückert
Published in:
Studies in Health Technology and Informatics, 2017
Publisher:
German Biobank Node
DOI:
10.3233/978-1-61499-808-2-75
Author(s):
Hansson, Mats G.; Kindstrom Dahlin, Moa; Howard, Heidi Carmen
Published in:
2015
Publisher:
BBMRI-ERIC
DOI:
10.5281/zenodo.3473050
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