Tools for Assessment and Planning of Aquaculture Sustainability

Deliverables

Other (9)

Carrying capacity models for shellfish culture within intertidal and coastal systems, coupled to hydrodynamic ecosystem models

Future scenarios maps and documentation for toolbox

Improved waste models for fed aquaculture systems

Carrying capacity and production models for aquaculture within freshwater lake systems in Europe

Development of TAPAS e-learning course materials

Improved models for interaction of nutrients, impacts and mitigation for coastal IMTA

Integrated spatial framework for a representative number of case study areas

Final delivery of biogeochemical variables from all model domains

Carrying capacity models for pond-systems and abstraction/replacement of river waters for pond-based systems

Documents, reports (28)

EO and Model-derived aquaculture indicators report

Report and scientific articles on the case studies & model validation

Workshop with relevant project partners to evaluate the ERA models

Report of model study of fish farms in the Baltic Sea

Report of critical evaluation and suggestion of models

Report and scientific article on the risk scenarios and evaluation

Inventory of available in-situ data sets

Report and scientific article on the toxicity experiments

Stakeholder workshop for the assessment of ecosystem services

Automatic in-situ measurement systems report

Report and scientific article on the critical review of available ERA models

Report on methods for quality control and detection of anomalies

Final report on framework for assessment of ecosystem services

Documentation report for Aquaculture Sustainability Toolbox

Report on management strategies for ES

Algorithm sets for Sentinel3-OLCI relevant to a range of aquaculture environments

Hands-on manual for Aquaculture Sustainability Tools

Report on case studies on farm practices and impact on ecosystem services

Draft consultation report on new and flexible approaches

TAPAS communication strategy for approval

Proceedings from a terminal TAPAS conference in Brussels

High-resolution satellite monitoring report

Report on potential for incorporating ES in management strategies

Report on TAPAS consultation to enhance cooperation with EU projects

Bayesian Network Model of ES

Delivery of environmental quality standard database and risk scenarios

Translations of the TAPAS Sustainability Toolbox manuals

Workshop on model development and design of case studies

Websites, patent fillings, videos etc. (5)

Press release to be sent to the media of participating countries

TAPAS videos uploaded to social media

Aquaculture Sustainability Decision Support Tool

Production of TAPAS exhibition materials

Release Public website and social media outlets established

Publications

Peer reviewed articles (19)

Shellfish Aquaculture from Space: Potential of Sentinel2 to Monitor Tide-Driven Changes in Turbidity, Chlorophyll Concentration and Oyster Physiological Response at the Scale of an Oyster Farm

Author(s): Pierre Gernez, David Doxaran, Laurent Barillé
Published in: Frontiers in Marine Science, 4, 2017, ISSN 2296-7745
Publisher: Frontiers
DOI: 10.3389/fmars.2017.00137

Assimilation of Ocean-Color Plankton Functional Types to Improve Marine Ecosystem Simulations

Author(s): S. Ciavatta, R. J. W. Brewin, J. Skákala, L. Polimene, L. de Mora, Y. Artioli, J. I. Allen
Published in: Journal of Geophysical Research: Oceans, 123/2, 2018, Page(s) 834-854, ISSN 2169-9275
Publisher: Wiley
DOI: 10.1002/2017JC013490

Sensitivity of the simulated Oxygen Minimum Zone to biogeochemical processes at an oligotrophic site in the Arabian Sea

Author(s): S. Sankar, L. Polimene, L. Marin, N.N. Menon, A. Samuelsen, R. Pastres, S. Ciavatta
Published in: Ecological Modelling, 372, 2018, Page(s) 12-23, ISSN 0304-3800
Publisher: Elsevier BV
DOI: 10.1016/j.ecolmodel.2018.01.016

Shellfish Aquaculture from Space: Potential of Sentinel2 to Monitor Tide-Driven Changes in Turbidity, Chlorophyll Concentration and Oyster Physiological Response at the Scale of an Oyster Farm

Author(s): Gernez, Pierre; Doxaran, David; Barillé, Laurent
Published in: Frontiers, 4, 2017, ISSN 2296-7745
Publisher: Frontiers
DOI: 10.3389/fmars.2017.00137/full

Optimising microalgae diets in sea urchin Paracentrotus lividus larviculture to promote aquaculture diversification

Author(s): Marta Castilla-Gavilán, Florence Buzin, Bruno Cognie, Justine Dumay, Vincent Turpin, Priscilla Decottignies
Published in: Aquaculture, 490, 2018, Page(s) 251-259, ISSN 0044-8486
Publisher: Elsevier BV
DOI: 10.1016/j.aquaculture.2018.02.003

Optimizing metamorphosis in Paracentrotus lividus aquaculture using alternative macroalgae species to Corallina sp.

Author(s): Marta Castilla-Gavilán, Vincent Turpin, Florence Buzin, Bruno Cognie, Priscilla Decottignies
Published in: Aquaculture International, 26/6, 2018, Page(s) 1511-1518, ISSN 0967-6120
Publisher: Kluwer Academic Publishers
DOI: 10.1007/s10499-018-0305-8

Variability of adjacency effects in sky reflectance measurements

Author(s): Philipp M. M. Groetsch, Peter Gege, Stefan G. H. Simis, Marieke A. Eleveld, Steef W. M. Peters
Published in: Optics Letters, 42/17, 2017, Page(s) 3359, ISSN 0146-9592
Publisher: Optical Society of America
DOI: 10.1364/OL.42.003359

Repeatability, Reproducibility, Separative Power and Subjectivity of Different Fish Morphometric Analysis Methods

Author(s): Péter Takács, Zoltán Vitál, Árpád Ferincz, Ádám Staszny
Published in: PLOS ONE, 11/6, 2016, Page(s) e0157890, ISSN 1932-6203
Publisher: Public Library of Science
DOI: 10.1371/journal.pone.0157890

What does ‘beyond compliance’ look like for the Scottish salmon aquaculture industry?

Author(s): Clara McGhee, Lynne Falconer, Trevor Telfer
Published in: Marine Policy, 109, 2019, Page(s) 103668, ISSN 0308-597X
Publisher: Pergamon Press Ltd.
DOI: 10.1016/j.marpol.2019.103668

Use of geographic information systems for aquaculture and recommendations for development of spatial tools

Author(s): Lynne Falconer, Anne Lise Middelboe, Hanne Kaas, Lindsay G. Ross, Trevor C. Telfer
Published in: Reviews in Aquaculture, 2019, ISSN 1753-5123
Publisher: Blackwell Pub. Asia
DOI: 10.1111/raq.12345

Use of models for the environmental risk assessment of veterinary medicines in European aquaculture: current situation and future perspectives

Author(s): Andreu Rico, Marco Vighi, Paul J. Van den Brink, Mechteld Horst, Ailbhe Macken, Adam Lillicrap, Lynne Falconer, Trevor C. Telfer
Published in: Reviews in Aquaculture, 11/4, 2018, Page(s) 969-988, ISSN 1753-5123
Publisher: Blackwell Pub. Asia
DOI: 10.1111/raq.12274

Evaluation of dried macrophytes as an alternative diet for the rearing of the sea urchin Paracentrotus lividus (Lamarck, 1816)

Author(s): Marta Castilla‐Gavilán, Bruno Cognie, Emilie Ragueneau, Vincent Turpin, Priscilla Decottignies
Published in: Aquaculture Research, 50/7, 2019, Page(s) 1762-1769, ISSN 1355-557X
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/are.14045

Ecoregions in the Mediterranean Sea Through the Reanalysis of Phytoplankton Functional Types and Carbon Fluxes

Author(s): S. Ciavatta, S. Kay, R. J. W. Brewin, R. Cox, A. Di Cicco, F. Nencioli, L. Polimene, M. Sammartino, R. Santoleri, J. Skákala, M. Tsapakis
Published in: Journal of Geophysical Research: Oceans, 2019, ISSN 2169-9275
Publisher: American Geophysical Union (AGU) / Wiley
DOI: 10.1029/2019jc015128

Remote Sensing-Driven Pacific Oyster (Crassostrea gigas) Growth Modeling to Inform Offshore Aquaculture Site Selection

Author(s): Stephanie C. J. Palmer, Pierre M. Gernez, Yoann Thomas, Stefan Simis, Peter I. Miller, Philippe Glize, Laurent Barillé
Published in: Frontiers in Marine Science, 6, 2020, Page(s) 1-19, ISSN 2296-7745
Publisher: frontiers
DOI: 10.3389/fmars.2019.00802

Biological, socio-economic, and administrative opportunities and challenges to moving aquaculture offshore for small French oyster-farming companies

Author(s): Laurent Barillé, Anthony Le Bris, Philippe Goulletquer, Yoann Thomas, Philippe Glize, Frank Kane, Lynne Falconer, Patrice Guillotreau, Brice Trouillet, Stéphanie Palmer, Pierre Gernez
Published in: Aquaculture, 521, 2020, Page(s) 735045, ISSN 0044-8486
Publisher: Elsevier BV
DOI: 10.1016/j.aquaculture.2020.735045

Sea urchin recruitment: Effect of diatom based biofilms on Paracentrotus lividus competent larvae

Author(s): Marta Castilla-Gavilán, Meshi Reznicov, Vincent Turpin, Priscilla Decottignies, Bruno Cognie
Published in: Aquaculture, 515, 2020, Page(s) 734559, ISSN 0044-8486
Publisher: Elsevier BV
DOI: 10.1016/j.aquaculture.2019.734559

Metabolomics and traditional indicators unveil stress of a seagrass (Cymodocea nodosa) meadow at intermediate distance from a fish farm

Author(s): Willemien de Kock, Harald Hasler-Sheetal, Marianne Holmer, Manolis Tsapakis, Eugenia T. Apostolaki
Published in: Ecological Indicators, 109, 2020, Page(s) 105765, ISSN 1470-160X
Publisher: Elsevier BV
DOI: 10.1016/j.ecolind.2019.105765

Assessment of atmospheric correction algorithms for the Sentinel-2A MultiSpectral Imager over coastal and inland waters

Author(s): M.A. Warren, S.G.H. Simis, V. Martinez-Vicente, K. Poser, M. Bresciani, K. Alikas, E. Spyrakos, C. Giardino, A. Ansper
Published in: Remote Sensing of Environment, 225, 2019, Page(s) 267-289, ISSN 0034-4257
Publisher: Elsevier BV
DOI: 10.1016/j.rse.2019.03.018

Validation of a spectral correction procedure for sun and sky reflections in above-water reflectance measurements

Author(s): Philipp M. M. Groetsch, Peter Gege, Stefan G. H. Simis, Marieke A. Eleveld, Steef W. M. Peters
Published in: Optics Express, 25/16, 2017, Page(s) A742, ISSN 1094-4087
Publisher: Optical Society of America
DOI: 10.1364/OE.25.00A742

Conference proceedings (2)

Designing a small-sized autonomous underwater vehicle architecture for regular periodic fish-cage net inspection

Author(s): Vaggelis Chalkiadakis, Nikos Papandroulakis, George Livanos, Konstantia Moirogiorgou, George Giakos, Michalis Zervakis
Published in: 2017 IEEE International Conference on Imaging Systems and Techniques (IST), 2017, Page(s) 1-6, ISBN 978-1-5386-1620-8
Publisher: IEEE
DOI: 10.1109/IST.2017.8261525

WISPstation: A new autonomous above water radiometer system

Author(s): Peters, Steef; Laanen, Marnix; Groetsch, Philipp; Ghezehegn, Semhar; Poser, Kathrin; Hommersom, Annelies; DeReus, Esther; Spaias, Lazaros
Published in: An extended abstract for a poster presented at the Ocean Optics conference in Dubrovnik 2018, 3, 2018
Publisher: Ocean Optics
DOI: 10.5281/zenodo.2533079

Non-peer reviewed articles (1)

TAPAS - Tools for Assessment and Planning of Aquaculture Sustainability - Horizon2020

Author(s): Trevor Telfer, Lynne Falconer, Hanne Kaas, David Jackson
Published in: Impact, 2018/8, 2018, Page(s) 9-11, ISSN 2398-7073
Publisher: Science Impact Ltd
DOI: 10.21820/23987073.2018.8.9

Software

Software via OpenAIRE (3)

Cage Aquaculture Particulate Output and Transport (CAPOT)

Author(s): Telfer, Trevor; Falconer, Lynne; Bostock, John; Corner, Richard; Oliver, Robert
DOI: 10.5281/zenodo.6551332; 10.5281/zenodo.6551331; 10.5281/zenodo.6551355
Publisher: Zenodo

Cage Aquaculture Particulate Output and Transport (CAPOT)

Author(s): Telfer, Trevor; Falconer, Lynne; Bostock, John; Corner, Richard; Oliver, Robert
DOI: oai:zenodo.org:6551332; 10.5281/zenodo.6551332
Publisher: Zenodo

Cage Aquaculture Particulate Output and Transport (CAPOT)

Author(s): Telfer, Trevor; Falconer, Lynne; Bostock, John; Corner, Richard; Oliver, Robert
DOI: oai:zenodo.org:6551355; 10.5281/zenodo.6551355
Publisher: Zenodo