Single-cell epigenomics: quantifying epigenetic changes in individual cells using DamID

Project Information

EpiID

Grant agreement ID: 678423

DOI 10.3030/678423

Project closed

EC signature date 25 February 2016

Start date 1 April 2016

End date 30 September 2021

Funded under

• EXCELLENT SCIENCE - European Research Council (ERC)

Total cost € 1 500 000,00

EU contribution € 1 500 000,00

Coordinated by

KONINKLIJKE NEDERLANDSE AKADEMIE VAN WETENSCHAPPEN - KNAW
Netherlands

Publications

Peer reviewed articles (4)

Simultaneous quantification of protein–DNA contacts and transcriptomes in single cells

Author(s): Koos Rooijers, Corina M. Markodimitraki, Franka J. Rang, Sandra S. de Vries, Alex Chialastri, Kim L. de Luca, Dylan Mooijman, Siddharth S. Dey, Jop Kind
Published in: Nature Biotechnology, Issue 37/7, 2019, Page(s) 766-772, ISSN 1087-0156
Publisher: Nature Publishing Group
DOI: 10.1038/s41587-019-0150-y

Genome–lamina interactions are established de novo in the early mouse embryo

Author(s): Máté Borsos, Sara M. Perricone, Tamás Schauer, Julien Pontabry, Kim L. de Luca, Sandra S. de Vries, Elias R. Ruiz-Morales, Maria-Elena Torres-Padilla, Jop Kind
Published in: Nature, Issue 569/7758, 2019, Page(s) 729-733, ISSN 0028-0836
Publisher: Nature Publishing Group
DOI: 10.1038/s41586-019-1233-0

DamC reveals principles of chromatin folding in vivo without crosslinking and ligation

Author(s): Josef Redolfi, Yinxiu Zhan, Christian Valdes-Quezada, Mariya Kryzhanovska, Isabel Guerreiro, Vytautas Iesmantavicius, Tim Pollex, Ralph S. Grand, Eskeatnaf Mulugeta, Jop Kind, Guido Tiana, Sebastien A. Smallwood, Wouter de Laat, Luca Giorgetti
Published in: Nature Structural & Molecular Biology, Issue 26/6, 2019, Page(s) 471-480, ISSN 1545-9993
Publisher: Nature Publishing Group
DOI: 10.1038/s41594-019-0231-0

Spatial chromatin organization and gene regulation at the nuclear lamina

Author(s): Isabel Guerreiro, Jop Kind
Published in: Current Opinion in Genetics & Development, Issue 55, 2019, Page(s) 19-25, ISSN 0959-437X
Publisher: Elsevier BV
DOI: 10.1016/j.gde.2019.04.008