Memory in biological regulatory circuits

Project Information

YEASTMEMORY

Grant agreement ID: 682009

DOI 10.3030/682009

Project closed

EC signature date 10 May 2016

Start date 1 October 2016

End date 30 September 2021

Funded under

• EXCELLENT SCIENCE - European Research Council (ERC)

Total cost € 1 959 844,00

EU contribution € 1 959 844,00

Coordinated by

VIB VZW
Belgium

Publications

Peer reviewed articles (10)

A new protocol for single-cell RNA-seq reveals stochastic gene expression during lag phase in budding yeast

Author(s): Abbas Jariani, Lieselotte Vermeersch, Bram Cerulus, Gemma Perez-Samper, Karin Voordeckers, Thomas Van Brussel, Bernard Thienpont, Diether Lambrechts, Kevin J Verstrepen
Published in: eLife, Issue 9, 2020, ISSN 2050-084X
Publisher: eLife Sciences Publications
DOI: 10.7554/elife.55320

Transition between fermentation and respiration determines history-dependent behavior in fluctuating carbon sources

Author(s): Bram Cerulus, Abbas Jariani, Gemma Perez-Samper, Lieselotte Vermeersch, Julian MJ Pietsch, Matthew M Crane, Aaron M New, Brigida Gallone, Miguel Roncoroni, Maria C Dzialo, Sander K Govers, Jhana O Hendrickx, Eva Galle, Maarten Coomans, Pieter Berden, Sara Verbandt, Peter S Swain, Kevin J Verstrepen
Published in: eLife, Issue 7, 2018, ISSN 2050-084X
Publisher: eLife Sciences Publications
DOI: 10.7554/elife.39234

The Crabtree Effect Shapes the Saccharomyces cerevisiae Lag Phase during the Switch between Different Carbon Sources

Author(s): Gemma Perez-Samper, Bram Cerulus, Abbas Jariani, Lieselotte Vermeersch, Nuria Barrajón Simancas, Markus M. M. Bisschops, Joost van den Brink, Daniel Solis-Escalante, Brigida Gallone, Dries De Maeyer, Elise van Bael, Tom Wenseleers, Jan Michiels, Kathleen Marchal, Pascale Daran-Lapujade, Kevin J. Verstrepen
Published in: mBio, Issue 9/5, 2018, ISSN 2150-7511
Publisher: American Society for Microbiology
DOI: 10.1128/mbio.01331-18

On the duration of the microbial lag phase

Author(s): Lieselotte Vermeersch, Gemma Perez-Samper, Bram Cerulus, Abbas Jariani, Brigida Gallone, Karin Voordeckers, Jan Steensels, Kevin J. Verstrepen
Published in: Current Genetics, Issue 65/3, 2019, Page(s) 721-727, ISSN 0172-8083
Publisher: Springer Verlag
DOI: 10.1007/s00294-019-00938-2

Development and validation of a glass-silicon microdroplet-based system to measure sulfite concentrations in beverages

Author(s): Yannick Vervoort, Rodrigo Sergio Wiederkehr, Michiel Smets, Maarten Fauvart, Tim Stakenborg, Gabrielle Woronoff, Liesbet Lagae, Kevin J. Verstrepen
Published in: Analytical and Bioanalytical Chemistry, Issue 411/6, 2019, Page(s) 1127-1134, ISSN 1618-2642
Publisher: Springer Verlag
DOI: 10.1007/s00216-018-1516-6

Noise and Epigenetic Inheritance of Single-Cell Division Times Influence Population Fitness

Author(s): Bram Cerulus, Aaron M. New, Ksenia Pougach, Kevin J. Verstrepen
Published in: Current Biology, Issue 26/9, 2016, Page(s) 1138-1147, ISSN 0960-9822
Publisher: Cell Press
DOI: 10.1016/j.cub.2016.03.010

Domestication and Divergence of Saccharomyces cerevisiae Beer Yeasts

Author(s): Brigida Gallone, Jan Steensels, Troels Prahl, Leah Soriaga, Veerle Saels, Beatriz Herrera-Malaver, Adriaan Merlevede, Miguel Roncoroni, Karin Voordeckers, Loren Miraglia, Clotilde Teiling, Brian Steffy, Maryann Taylor, Ariel Schwartz, Toby Richardson, Christopher White, Guy Baele, Steven Maere, Kevin J. Verstrepen
Published in: Cell, Issue 166/6, 2016, Page(s) 1397-1410.e16, ISSN 0092-8674
Publisher: Cell Press
DOI: 10.1016/j.cell.2016.08.020

Interspecific hybridization facilitates niche adaptation in beer yeast

Author(s): Brigida Gallone, Jan Steensels, Stijn Mertens, Maria C. Dzialo, Jonathan L. Gordon, Ruben Wauters, Florian A. Theßeling, Francesca Bellinazzo, Veerle Saels, Beatriz Herrera-Malaver, Troels Prahl, Christopher White, Mathias Hutzler, Franz Meußdoerffer, Philippe Malcorps, Ben Souffriau, Luk Daenen, Guy Baele, Steven Maere, Kevin J. Verstrepen
Published in: Nature Ecology & Evolution, Issue 3/11, 2019, Page(s) 1562-1575, ISSN 2397-334X
Publisher: Nature Springer
DOI: 10.1038/s41559-019-0997-9

A Hands‐On Guide to Brewing and Analyzing Beer in the Laboratory

Author(s): Florian A. Thesseling, Peter W. Bircham, Stijn Mertens, Karin Voordeckers, Kevin J. Verstrepen
Published in: Current Protocols in Microbiology, Issue 54/1, 2019, ISSN 1934-8525
Publisher: John Wiley & Sons Inc.
DOI: 10.1002/cpmc.91

Ethanol exposure increases mutation rate through error-prone polymerases

Author(s): Karin Voordeckers, Camilla Colding, Lavinia Grasso, Benjamin Pardo, Lore Hoes, Jacek Kominek, Kim Gielens, Kaat Dekoster, Jonathan Gordon, Elisa Van der Zande, Peter Bircham, Toon Swings, Jan Michiels, Peter Van Loo, Sandra Nuyts, Philippe Pasero, Michael Lisby, Kevin J. Verstrepen
Published in: Nature Communications, Issue 11/1, 2020, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-020-17447-3