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Atomic Force Microscopy for Molecular Structure Elucidation

Publications

Probing Molecular Excited States by Atomic Force Microscopy

Author(s): Shadi Fatayer, Florian Albrecht, Ivano Tavernelli, Mats Persson, Nikolaj Moll, Leo Gross
Published in: Physical Review Letters, Issue 126/17, 2021, ISSN 0031-9007
Publisher: American Physical Society
DOI: 10.1103/physrevlett.126.176801

Intramolecular coupling of terminal alkynes by atom manipulation

Author(s): Florian Albrecht, Dulce Rey, Shadi Fatayer, Dolores Pérez, Diego Peña, Leo Gross
Published in: Angewandte Chemie International Edition, Issue 142, 2020, Page(s) 12921–12924, ISSN 1433-7851
Publisher: John Wiley & Sons Ltd.
DOI: 10.1002/anie.202009200

Charge-Induced Structural Changes in a Single Molecule Investigated by Atomic Force Microscopy

Author(s): Philipp Scheuerer, Laerte L. Patera, Felix Simbürger, Fabian Queck, Ingmar Swart, Bruno Schuler, Leo Gross, Nikolaj Moll, Jascha Repp
Published in: Physical Review Letters, Issue 123/6, 2019, ISSN 0031-9007
Publisher: American Physical Society
DOI: 10.1103/physrevlett.123.066001

Imaging Titan’s Organic Haze at Atomic Scale

Author(s): Fabian Schulz, Julien Maillard, Katharina Kaiser, Isabelle Schmitz-Afonso, Thomas Gautier, Carlos Afonso, Nathalie Carrasco, Leo Gross
Published in: The Astrophysical Journal, Issue 908/1, 2021, Page(s) L13, ISSN 2041-8213
Publisher: IOP
DOI: 10.3847/2041-8213/abd93e

The Role of Methyl Groups in the Early Stage of Thermal Polymerization of Polycyclic Aromatic Hydrocarbons Revealed by Molecular Imaging

Author(s): Pengcheng Chen, Shadi Fatayer, Bruno Schuler, Jordan N. Metz, Leo Gross, Nan Yao, Yunlong Zhang
Published in: Energy & Fuels, Issue 35/3, 2021, Page(s) 2224-2233, ISSN 0887-0624
Publisher: American Chemical Society
DOI: 10.1021/acs.energyfuels.0c04016

Characterizing aliphatic moieties in hydrocarbons with atomic force microscopy

Author(s): Bruno Schuler, Yunlong Zhang, Sara Collazos, Shadi Fatayer, Gerhard Meyer, Dolores Pérez, Enrique Guitián, Michael R. Harper, J. Douglas Kushnerick, Diego Peña, Leo Gross
Published in: Chem. Sci., Issue 8/3, 2017, Page(s) 2315-2320, ISSN 2041-6520
Publisher: Royal Society of Chemistry
DOI: 10.1039/c6sc04698c

Synthesis and characterization of triangulene

Author(s): Niko Pavliček, Anish Mistry, Zsolt Majzik, Nikolaj Moll, Gerhard Meyer, David J. Fox, Leo Gross
Published in: Nature Nanotechnology, Issue 12/4, 2017, Page(s) 308-311, ISSN 1748-3387
Publisher: Nature Publishing Group
DOI: 10.1038/nnano.2016.305

Generation, manipulation and characterization of molecules by atomic force microscopy

Author(s): Niko Pavliček, Leo Gross
Published in: Nature Reviews Chemistry, Issue 1/1, 2017, Page(s) 0005, ISSN 2397-3358
Publisher: Nature Publishing Group
DOI: 10.1038/s41570-016-0005

Generation and Characterization of a meta -Aryne on Cu and NaCl Surfaces

Author(s): Niko Pavliček, Zsolt Majzik, Sara Collazos, Gerhard Meyer, Dolores Pérez, Enrique Guitián, Diego Peña, Leo Gross
Published in: ACS Nano, Issue 11/11, 2017, Page(s) 10768-10773, ISSN 1936-0851
Publisher: American Chemical Society
DOI: 10.1021/acsnano.7b06137

Heavy Oil Based Mixtures of Different Origins and Treatments Studied by Atomic Force Microscopy

Author(s): Bruno Schuler, Shadi Fatayer, Gerhard Meyer, Estrella Rogel, Michael Moir, Yunlong Zhang, Michael R. Harper, Andrew E. Pomerantz, Kyle D. Bake, Matthias Witt, Diego Peña, J. Douglas Kushnerick, Oliver C. Mullins, Cesar Ovalles, Frans G. A. van den Berg, Leo Gross
Published in: Energy & Fuels, Issue 31/7, 2017, Page(s) 6856-6861, ISSN 0887-0624
Publisher: American Chemical Society
DOI: 10.1021/acs.energyfuels.7b00805

Atomic and electronic structure of Si dangling bonds in quasi-free-standing monolayer graphene

Author(s): Yuya Murata, Tommaso Cavallucci, Valentina Tozzini, Niko Pavliček, Leo Gross, Gerhard Meyer, Makoto Takamura, Hiroki Hibino, Fabio Beltram, Stefan Heun
Published in: Nano Research, 2017, ISSN 1998-0124
Publisher: Tsinghua Univ Press
DOI: 10.1007/s12274-017-1697-x

Tip-induced passivation of dangling bonds on hydrogenated Si(100)-2 × 1

Author(s): Niko Pavliček, Zsolt Majzik, Gerhard Meyer, Leo Gross
Published in: Applied Physics Letters, Issue 111/5, 2017, Page(s) 053104, ISSN 0003-6951
Publisher: American Institute of Physics
DOI: 10.1063/1.4989749

Studying an antiaromatic polycyclic hydrocarbon adsorbed on different surfaces

Author(s): Zsolt Majzik, Niko Pavliček, Manuel Vilas-Varela, Dolores Pérez, Nikolaj Moll, Enrique Guitián, Gerhard Meyer, Diego Peña, Leo Gross
Published in: Nature Communications, Issue 9/1, 2018, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-018-03368-9

Direct Visualization of Individual Aromatic Compound Structures in Low Molecular Weight Marine Dissolved Organic Carbon

Author(s): Shadi Fatayer, Alysha I. Coppola, Fabian Schulz, Brett D. Walker, Taylor A. Broek, Gerhard Meyer, Ellen R. M. Druffel, Matthew McCarthy, Leo Gross
Published in: Geophysical Research Letters, Issue 45/11, 2018, Page(s) 5590-5598, ISSN 0094-8276
Publisher: American Geophysical Union
DOI: 10.1029/2018GL077457

Atomic Force Microscopy Identifying Fuel Pyrolysis Products and Directing the Synthesis of Analytical Standards

Author(s): Shadi Fatayer, Nimesh B. Poddar, Sabela Quiroga, Fabian Schulz, Bruno Schuler, Subramanian V. Kalpathy, Gerhard Meyer, Dolores Pérez, Enrique Guitián, Diego Peña, Mary J. Wornat, Leo Gross
Published in: Journal of the American Chemical Society, Issue 140/26, 2018, Page(s) 8156-8161, ISSN 0002-7863
Publisher: American Chemical Society
DOI: 10.1021/jacs.8b02525

Damping by sequentially tunneling electrons

Author(s): Wolfram Steurer, Jascha Repp, Leo Gross, Gerhard Meyer
Published in: Surface Science, Issue 678, 2018, Page(s) 112-117, ISSN 0039-6028
Publisher: Elsevier BV
DOI: 10.1016/j.susc.2018.02.011

Atomic Force Microscopy for Molecular Structure Elucidation

Author(s): Leo Gross, Bruno Schuler, Niko Pavliček, Shadi Fatayer, Zsolt Majzik, Nikolaj Moll, Diego Peña, Gerhard Meyer
Published in: Angewandte Chemie International Edition, Issue 57/15, 2018, Page(s) 3888-3908, ISSN 1433-7851
Publisher: John Wiley & Sons Ltd.
DOI: 10.1002/anie.201703509

Insights into incipient soot formation by atomic force microscopy

Author(s): Fabian Schulz, Mario Commodo, Katharina Kaiser, Gianluigi De Falco, Patrizia Minutolo, Gerhard Meyer, Andrea D`Anna, Leo Gross
Published in: Proceedings of the Combustion Institute, 2018, ISSN 1540-7489
Publisher: Combustion Institute
DOI: 10.1016/j.proci.2018.06.100

Reorganization energy upon charging a single molecule on an insulator measured by atomic force microscopy

Author(s): Shadi Fatayer, Bruno Schuler, Wolfram Steurer, Ivan Scivetti, Jascha Repp, Leo Gross, Mats Persson, Gerhard Meyer
Published in: Nature Nanotechnology, Issue 13/5, 2018, Page(s) 376-380, ISSN 1748-3387
Publisher: Nature Publishing Group
DOI: 10.1038/s41565-018-0087-1

Polyyne formation via skeletal rearrangement induced by atomic manipulation

Author(s): Niko Pavliček, Przemyslaw Gawel, Daniel R. Kohn, Zsolt Majzik, Yaoyao Xiong, Gerhard Meyer, Harry L. Anderson, Leo Gross
Published in: Nature Chemistry, Issue 10/8, 2018, Page(s) 853-858, ISSN 1755-4330
Publisher: Nature Publishing Group
DOI: 10.1038/s41557-018-0067-y

[19]Dendriphene: A 19-Ring Dendritic Nanographene

Author(s): Manuel Vilas-Varela, Shadi Fatayer, Zsolt Majzik, Dolores Pérez, Enrique Guitián, Leo Gross, Diego Peña
Published in: Chemistry - A European Journal, Issue 24/67, 2018, Page(s) 17697-17700, ISSN 0947-6539
Publisher: John Wiley & Sons Ltd.
DOI: 10.1002/chem.201805140

Understanding the Effects of Sample Preparation on the Chemical Structures of Petroleum Imaged with Noncontact Atomic Force Microscopy

Author(s): Yunlong Zhang, Bruno Schuler, Shadi Fatayer, Leo Gross, Michael R. Harper, J. Douglas Kushnerick
Published in: Industrial & Engineering Chemistry Research, Issue 57/46, 2018, Page(s) 15935-15941, ISSN 0888-5885
Publisher: American Chemical Society
DOI: 10.1021/acs.iecr.8b03962

Controlled Fragmentation of Single Molecules with Atomic Force Microscopy by Employing Doubly Charged States

Author(s): Shadi Fatayer, Nikolaj Moll, Sara Collazos, Dolores Pérez, Enrique Guitián, Diego Peña, Leo Gross, Gerhard Meyer
Published in: Physical Review Letters, Issue 121/22, 2018, ISSN 0031-9007
Publisher: American Physical Society
DOI: 10.1103/physrevlett.121.226101

On the early stages of soot formation: Molecular structure elucidation by high-resolution atomic force microscopy

Author(s): Mario Commodo, Katharina Kaiser, Gianluigi De Falco, Patrizia Minutolo, Fabian Schulz, Andrea D'Anna, Leo Gross
Published in: Combustion and Flame, Issue 205, 2019, Page(s) 154-164, ISSN 0010-2180
Publisher: Elsevier BV
DOI: 10.1016/j.combustflame.2019.03.042

Elucidating the Geometric Substitution of Petroporphyrins by Spectroscopic Analysis and AFM Molecular Imaging

Author(s): Yunlong Zhang, Fabian Schulz, B. McKay Rytting, Clifford C Walters, Katharina Kaiser, Jordan N. Metz, Michael R. Harper, Shamel S Merchant, Anthony S Mennito, Kuangnan Qian, J. Douglas Kushnerick, Peter K. Kilpatrick, Leo Gross
Published in: Energy & Fuels, 2019, ISSN 0887-0624
Publisher: American Chemical Society
DOI: 10.1021/acs.energyfuels.9b00816

A Single-Molecule Chemical Reaction Studied by High-Resolution Atomic Force Microscopy and Scanning Tunneling Microscopy Induced Light Emission

Author(s): Katharina Kaiser, Leo Gross, Fabian Schulz
Published in: ACS Nano, Issue 13/6, 2019, Page(s) 6947-6954, ISSN 1936-0851
Publisher: American Chemical Society
DOI: 10.1021/acsnano.9b01852

An sp-hybridized molecular carbon allotrope, cyclo[18]carbon

Author(s): Katharina Kaiser, Lorel M. Scriven, Fabian Schulz, Przemyslaw Gawel, Leo Gross, Harry L. Anderson
Published in: Science, Issue 365/6459, 2019, Page(s) 1299-1301, ISSN 0036-8075
Publisher: American Association for the Advancement of Science
DOI: 10.1126/science.aay1914

Molecular structure elucidation with charge-state control

Author(s): Fatayer, Shadi; Albrecht, Florian; Zhang, Yunlong; Urbonas, Darius; Peña, Diego; Moll, Nikolaj; Gross, Leo
Published in: Science, Issue 1, 2019, Page(s) 142-145, ISSN 1095-9203
Publisher: American Association for the Advancement of Science

Synthesis of Cyclo[18]carbon via Debromination of C 18 Br 6

Author(s): Lorel M. Scriven, Katharina Kaiser, Fabian Schulz, Alistair J. Sterling, Steffen L. Woltering, Przemyslaw Gawel, Kirsten E. Christensen, Harry L. Anderson, Leo Gross
Published in: Journal of the American Chemical Society, Issue 142/30, 2020, Page(s) 12921-12924, ISSN 0002-7863
Publisher: American Chemical Society
DOI: 10.1021/jacs.0c05033

Exploring a Route to Cyclic Acenes by On‐Surface Synthesis

Author(s): Fabian Schulz, Fátima García, Katharina Kaiser, Dolores Pérez, Enrique Guitián, Leo Gross, Diego Peña
Published in: Angewandte Chemie International Edition, Issue 58/27, 2019, Page(s) 9038-9042, ISSN 1433-7851
Publisher: John Wiley & Sons Ltd.
DOI: 10.1002/anie.201902784

Revisiting Kekulene: Synthesis and Single-Molecule Imaging

Author(s): Iago Pozo, Zsolt Majzik, Niko Pavliček, Manuel Melle-Franco, Enrique Guitián, Diego Peña, Leo Gross, Dolores Pérez
Published in: Journal of the American Chemical Society, Issue 141/39, 2019, Page(s) 15488-15493, ISSN 0002-7863
Publisher: American Chemical Society
DOI: 10.1021/jacs.9b07926

Addressing Long-Standing Chemical Challenges by AFM with Functionalized Tips

Author(s): Diego Peña, Niko Pavliček, Bruno Schuler, Nikolaj Moll, Dolores Pérez, Enrique Guitián, Gerhard Meyer, Leo Gross
Published in: On-Surface Synthesis II, 2018, Page(s) 209-227, ISBN 978-3-319-75809-1
Publisher: Springer International Publishing
DOI: 10.1007/978-3-319-75810-7_10

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