Unraveling complex organ regeneration through live imaging and molecular profiling approaches

Publications

Non-peer reviewed articles (2)

The crustacean model Parhyale hawaiensis

Author(s): Mathilde Paris, Carsten Wolff, Nipam Patel, Michalis Averof
Published in: Current Topics in Developmental Biology, 00702153, 2021, ISSN 0070-2153
Publisher: Academic Press
DOI: 10.1016/bs.ctdb.2022.02.001

The crustacean Parhyale

Author(s): Michalis Averof
Published in: Nature Methods, 19, 2022, Page(s) 1014–1016, ISSN 1548-7091
Publisher: Nature Publishing Group
DOI: 10.1038/s41592-022-01596-y

Peer reviewed articles (4)

Regenerated crustacean limbs are precise replicas

Author(s): Alba Almazan, Cagri Cevrim, Jacob M. Musser, Michalis Averof, Mathilde Paris
Published in: Science Advances, 2022, ISSN 2375-2548
Publisher: AAAS
DOI: 10.1126/sciadv.abn9823

The multifaceted role of nerves in animal regeneration

Author(s): C. Sinigaglia, M. Averof
Published in: Curr Op Genet & Dev, 57, 2019, Page(s) 98–105, ISSN 0959-437X
Publisher: Elsevier BV

Tracking cell lineages in 3D by incremental deep learning

Author(s): Ko Sugawara, Cagri Cevrim, Michalis Averof
Published in: eLife, 2022, ISSN 2050-084X
Publisher: eLife Sciences Publications
DOI: 10.7554/elife.69380

Distinct gene expression dynamics in developing and regenerating crustacean limbs

Author(s): Chiara Sinigaglia, Alba Almazán, Marie Lebel, Marie Sémon, Benjamin Gillet, Sandrine Hughes, Eric Edsinger, Michalis Averof, Mathilde Paris
Published in: PNAS, 00278424, 2022, ISSN 0027-8424
Publisher: National Academy of Sciences
DOI: 10.1073/pnas.2119297119

Other (2)

Star-convex Polyhedra for 3D Object Detection and Segmentation in Microscopy

Author(s): M. Weigert, U. Schmidt, R. Haase, K. Sugawara, G. Myers
Published in: arXiv, arXiv:1908.03636, 2019
Publisher: Cornell University

Tracking cell lineages in 3D by incremental deep learning

Author(s): Ko Sugawara, Cagri Cevrim, Michalis Averof
Published in: bioRxiv, 2021
Publisher: bioRxiv
DOI: 10.1101/2021.02.26.432552

Conference proceedings (1)

Star-convex Polyhedra for 3D Object Detection and Segmentation in Microscopy

Author(s): Martin Weigert, Uwe Schmidt, Robert Haase, Ko Sugawara, Gene Myers
Published in: 2020 IEEE Winter Conference on Applications of Computer Vision (WACV), 2020, Page(s) 3655-3662, ISBN 978-1-7281-6553-0
Publisher: IEEE
DOI: 10.1109/wacv45572.2020.9093435