Computational Dissection of Effective Circuitry and Encoding in the Retina for Normal and Restored Vision

Project Information

CODE4Vision

Grant agreement ID: 724822

DOI

10.3030/724822

Project closed

EC signature date 27 March 2017

Start date 1 June 2017

End date 30 November 2022

Funded under

• EXCELLENT SCIENCE - European Research Council (ERC)

Total cost

€ 1 991 445,00

EU contribution

€ 1 991 445,00

Coordinated by

UNIVERSITAETSMEDIZIN GOETTINGEN - GEORG-AUGUST-UNIVERSITAET GOETTINGEN - STIFTUNG OEFFENTLICHEN RECHTS
Germany

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Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Publications

Peer reviewed articles (13)

Retinal receptive-field substructure: scaffolding for coding and computation

Author(s): Sören J. Zapp, Steffen Nitsche, Tim Gollisch
Published in: Trends in Neurosciences, Issue 45, 2022, Page(s) 430-445, ISSN 0166-2236
Publisher: Elsevier BV
DOI: 10.1016/j.tins.2022.03.005

Retinal Encoding of Natural Scenes

Author(s): Dimokratis Karamanlis, Helene M. Schreyer, Tim Gollisch
Published in: Annual Review of Vision Science, Issue 8, 2022, Page(s) 171-193, ISSN 2374-4642
Publisher: Annual Reviews (US)
DOI: 10.1146/annurev-vision-100820-114239

Linear and nonlinear chromatic integration in the mouse retina

Author(s): Mohammad Hossein Khani, Tim Gollisch
Published in: Nature Communications, Issue 12/1, 2021, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-021-22042-1

Ectosomes and exosomes modulate neuronal spontaneous activity

Author(s): Inês C. Brás; Mohammad H. Khani; Dietmar Riedel; Iwan Parfentev; Ellen Gerhardt; Christoph van Riesen; Henning Urlaub; Tim Gollisch; Tiago F. Outeiro
Published in: Journal of Proteomics, Issue 269, 2022, Page(s) 104721, ISSN 1874-3919
Publisher: Elsevier BV
DOI: 10.1016/j.jprot.2022.104721

Nonlinear Spatial Integration Underlies the Diversity of Retinal Ganglion Cell Responses to Natural Images

Author(s): Dimokratis Karamanlis, Tim Gollisch
Published in: The Journal of Neuroscience, Issue 41/15, 2021, Page(s) 3479-3498, ISSN 0270-6474
Publisher: Society for Neuroscience
DOI: 10.1523/jneurosci.3075-20.2021

Simple model for encoding natural images by retinal ganglion cells with nonlinear spatial integration

Author(s): Jian K. Liu, Dimokratis Karamanlis, Tim Gollisch
Published in: PLoS Computational Biology, Issue 18/3, 2022, Page(s) e1009925, ISSN 1553-734X
Publisher: Public Library of Science
DOI: 10.1371/journal.pcbi.1009925

Inference of neuronal functional circuitry with spike-triggered non-negative matrix factorization

Author(s): Jian K. Liu, Helene M. Schreyer, Arno Onken, Fernando Rozenblit, Mohammad H. Khani, Vidhyasankar Krishnamoorthy, Stefano Panzeri, Tim Gollisch
Published in: Nature Communications, Issue 8/1, 2017, Page(s) 149/1-149/14, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-017-00156-9

Differential Effects of HCN Channel Block on On and Off Pathways in the Retina as a Potential Cause for Medication-Induced Phosphene Perception

Author(s): Sebastian Bemme, Michael Weick, Tim Gollisch
Published in: Investigative Opthalmology & Visual Science, Issue 58/11, 2017, Page(s) 4754, ISSN 0146-0404
Publisher: Association for Research in Vision and Ophthalmology
DOI: 10.1167/iovs.17-21572

Diversity in spatial scope of contrast adaptation among mouse retinal ganglion cells

Author(s): Mohammad Hossein Khani, Tim Gollisch
Published in: Journal of Neurophysiology, Issue 118/6, 2017, Page(s) 3024-3043, ISSN 0022-3077
Publisher: American Physiological Society
DOI: 10.1152/jn.00529.2017

Activity Correlations between Direction-Selective Retinal Ganglion Cells Synergistically Enhance Motion Decoding from Complex Visual Scenes

Author(s): Norma Krystyna Kühn, Tim Gollisch
Published in: Neuron, Issue 101/5, 2019, Page(s) 963-976.e7, ISSN 0896-6273
Publisher: Cell Press
DOI: 10.1016/j.neuron.2019.01.003

Molecular Mechanisms Mediating the Transfer of Disease-Associated Proteins and Effects on Neuronal Activity

Author(s): Inês C. Brás, Mohammad H. Khani, Eftychia Vasili, Wiebke Möbius, Dietmar Riedel, Iwan Parfentev, Ellen Gerhardt, Christiane Fahlbusch, Henning Urlaub, Markus Zweckstetter, Tim Gollisch, Tiago F. Outeiro
Published in: Journal of Parkinson's Disease, Issue 12, 2022, Page(s) 2397-2422, ISSN 1877-7171
Publisher: IOS Press
DOI: 10.3233/jpd-223516

What the salamander eye has been telling the vision scientist’s brain

Author(s): Fernando Rozenblit, Tim Gollisch
Published in: Seminars in Cell & Developmental Biology, Issue 106, 2020, Page(s) 61-71, ISSN 1084-9521
Publisher: Academic Press
DOI: 10.1016/j.semcdb.2020.04.010

Nonlinear spatial integration in retinal bipolar cells shapes the encoding of artificial and natural stimuli

Author(s): Helene Marianne Schreyer, Tim Gollisch
Published in: Neuron, Issue 109, 2021, Page(s) 1692-1706, ISSN 0896-6273
Publisher: Cell Press
DOI: 10.1016/j.neuron.2021.03.015

Other (5)

Natural stimuli drive concerted nonlinear responses in populations of retinal ganglion cells

Author(s): Dimokratis Karamanlis, Mohammad H. Khani, Helene M. Schreyer, Sören J. Zapp, Matthias Mietsch, Tim Gollisch
Published in: bioRxiv, 2023, Page(s) 2023.01.10.523412
Publisher: Cold Spring Harbor Laboratory
DOI: 10.1101/2023.01.10.523412

Evidence for novel transient clusters of cholinergic ganglion cells in the neonatal mouse retina

Author(s): de Montigny, Jean; Krishnamoorthy, Vidhyasankar; Rozenblit, Fernando; Gollisch, Tim; Sernagor, Evelyne
Published in: bioRxiv, 2019, Page(s) 2019.12.27.888792
Publisher: Cold Spring Harbor Laboratory
DOI: 10.1101/2019.12.27.888792

Novel transient cell clusters provide a possible link between early neural activity and angiogenesis in the neonatal mouse retina

Author(s): Jean de Montigny, Courtney Thorne, Diya Bhattacharya, Dimitrios B. Sertedakis, Vidhyasankar Krishnamoorthy, Fernando Rozenblit, Tim Gollisch, Evelyne Sernagor
Published in: bioRxiv, 2022, Page(s) 2022.08.04.502860
Publisher: Cold Spring Harbor Laboratory
DOI: 10.1101/2022.08.04.502860

Filter-based models of suppression in retinal ganglion cells: comparison and generalization across species and stimuli

Author(s): Neda Shahidi, Fernando Rozenblit, Mohammad H. Khani, Helene M. Schreyer, Matthias Mietsch, Dario A. Protti, Tim Gollisch
Published in: bioRxiv, 2022, Page(s) 2022.12.01.518577
Publisher: Cold Spring Harbor Laboratory
DOI: 10.1101/2022.12.01.518577

Diversity of Ganglion Cell Responses to Saccade-like Image Shifts in the Primate Retina

Author(s): Steffen Nitsche, Mohammad H. Khani, Dimokratis Karamanlis, Yunus C. Erol, Sören J. Zapp, Matthias Mietsch, Dario A. Protti, Fernando Rozenblit, Tim Gollisch
Published in: bioRxiv, 2022, Page(s) 2022.08.12.503725
Publisher: Cold Spring Harbor Laboratory
DOI: 10.1101/2022.08.12.503725