Reconstructing community dynamics and ecosystem functioning after glacial retreat

Publications

The importance of species addition versus replacement varies over succession in plant communities after glacial retreat

Auteurs: Cantera, I.; Carteron, A.; Guerrieri, A.; Marta, S.; Bonin, A.; Ambrosini, R.; Anthelme, F.; Azzoni, R.S.; Almond, P.; Gazitúa, P.A.; Cauvy-Fraunié, S.; Lievano, J.L.C.; Chand, P.; Sharma, M.C.; Clague, J.; Rapre, J.A.C.; Compostella, C.; Encarnación, R.C.; Dangles, O.; Eger, A.; Erokhin, S.; Franzetti, A.; Gielly, L.; Gili, F.; Gobbi, M.; Hagvar, S.; Khedim, N.; Meneses, R.I.; Peyre, G.; Pitti
Publié dans: Nature Plants, Numéro 10, 2024, Page(s) 256–267, ISSN 2055-0278
Éditeur: Nature Publications Group
DOI: 10.1038/s41477-023-01609-4

Heterogeneous changes of soil microclimate in high mountains and glacier forelands

Auteurs: Marta, S.; Zimmer, A.; Caccianiga, M.; Gobbi, M.; Ambrosini, R.; Azzoni, R.S.; Gili, F.; Pittino, F.; Thuiller, W.; Provenzale, A.; Ficetola, G.F.
Publié dans: Nature Communications, Numéro 14, 2023, Page(s) 5306, ISSN 2041-1723
Éditeur: Nature Publishing Group
DOI: 10.1038/s41467-023-41063-6

Evaluation of Soil Biodiversity in Alpine Habitats through eDNA Metabarcoding and Relationships with Environmental Features

Auteurs: Noemi Rota, Claudia Canedoli, Chiara Ferrè, Gentile Francesco Ficetola, Alessia Guerrieri, Emilio Padoa-Schioppa
Publié dans: Forests, Numéro 11/7, 2020, Page(s) 738, ISSN 1999-4907
Éditeur: MDPI Open Access Publishing
DOI: 10.3390/f11070738

Effects of soil preservation for biodiversity monitoring using environmental DNA

Auteurs: Guerrieri A., Bonin A., Münkemüller T., Gielly L., Thuiller W., Ficetola G.F.
Publié dans: Molecular Ecology, Numéro 2020, 2020, ISSN 1365-294X
Éditeur: Blackwell Publishing
DOI: 10.1111/mec.15674

Optimal sequence similarity thresholds for clustering of molecular operational taxonomic units in DNA metabarcoding studies

Auteurs: Aurélie Bonin; Alessia Guerrieri; Gentile Francesco Ficetola
Publié dans: MOLECULAR ECOLOGY RESOURCES, Numéro 23, 2023, Page(s) 368-381, ISSN 1755-098X
Éditeur: Blackwell Publishing Inc.
DOI: 10.1111/1755-0998.13709

Multi‐taxa colonisation along the foreland of a vanishing equatorial glacier

Auteurs: Pedro Rosero, Verónica Crespo‐Pérez, Rodrigo Espinosa, Patricio Andino, Álvaro Barragán, Pierre Moret, Mauro Gobbi, Gentile Francesco Ficetola, Ricardo Jaramillo, Priscilla Muriel, Fabien Anthelme, Dean Jacobsen, Olivier Dangles, Thomas Condom, Ludovic Gielly, Jérôme Poulenard, Antoine Rabatel, Rubén Basantes, Bolívar Cáceres Correa, Sophie Cauvy‐Fraunié
Publié dans: Ecography, 2021, ISSN 0906-7590
Éditeur: Blackwell Publishing Inc.
DOI: 10.1111/ecog.05478

Local climate modulates the development of soil nematode communities after glacier retreat

Auteurs: Alessia Guerrieri; Isabel Cantera; Silvio Marta; Aurélie Bonin; Alexis Carteron; Roberto Ambrosini; Marco Caccianiga; Fabien Anthelme; Roberto Sergio Azzoni; Peter Almond; Pablo Alviz Gazitúa; Sophie Cauvy‐Fraunié; Jorge Luis Ceballos Lievano; Pritam Chand; Milap Chand Sharma; John Clague; Justiniano Alejo Cochachín Rapre; Chiara Compostella; Rolando Cruz Encarnación; Olivier Dangles;
Publié dans: Global Change Biology, Numéro 30, 2024, Page(s) e17057, ISSN 1354-1013
Éditeur: Blackwell Publishing Inc.
DOI: 10.1111/gcb.17057

A hole in the nematosphere: tardigrades and rotifers dominate the cryoconite hole environment, whereas nematodes are missing

Auteurs: Zawierucha, K., Porazinska, D.L., Ficetola, G.F., Ambrosini, R., Baccolo, G., Buda, J., Ceballos, J.L., Devetter, M., Dial, R., Franzetti, A., Fuglewicz, U., Gielly, L., Łokas12, E., Janko, K., Jaromerska, T., Koscinski, A., Kozłowska, A., Ono, M., Parnikoza, I., Pittino, F., Poniecka, E., Sommers, P., Schmidt, K.S., Shain, D., Sikorska, S., Uetake, J., Takeuchi, N.
Publié dans: Journal of Zoology, 2020, ISSN 1469-7998
Éditeur: Wiley
DOI: 10.1111/jzo.12832

Optimal sequence similarity thresholds for clustering of molecular operational taxonomic units in <scp>DNA</scp> metabarcoding studies

Auteurs: Aurélie Bonin; Alessia Guerrieri; Gentile Francesco Ficetola
Publié dans: Molecular Ecology Resources, Numéro 13, 2022, ISSN 1755-0998
Éditeur: Wiley
DOI: 10.1111/1755-0998.13709

Connecting high-throughput biodiversity inventories: Opportunities for a site-based genomic framework for global integration and synthesis

Auteurs: Paula Arribas; Carmelo Andújar; Martin I. Bidartondo; Martin I. Bidartondo; Kristine Bohmann; Eric Coissac; Simon Creer; Jeremy R deWaard; Vasco Elbrecht; Gentile Francesco Ficetola; Gentile Francesco Ficetola; Marta Goberna; Susan Kennedy; Susan Kennedy; Henrik Krehenwinkel; Florian Leese; Vojtech Novotny; Vojtech Novotny; Fredrik Ronquist; Douglas W. Yu; Douglas W. Yu; Douglas W. Yu; Lucie Zing
Publié dans: Molecular Ecology, Numéro 1365294X, 2021, Page(s) 1120–1135, ISSN 1365-294X
Éditeur: John Wiley & Sons Ltd
DOI: 10.1111/mec.15797

Vanishing permanent glaciers: climate change is threatening a European Union habitat (Code 8340) and its poorly known biodiversity

Auteurs: M. Gobbi, R. Ambrosini, C. Casarotto, G. Diolaiuti, G. F. Ficetola, V. Lencioni, R. Seppi, C. Smiraglia, D. Tampucci, B. Valle, M. Caccianiga
Publié dans: Biodiversity and Conservation, Numéro 30/7, 2021, Page(s) 2267-2276, ISSN 0960-3115
Éditeur: Kluwer Academic Publishers
DOI: 10.1007/s10531-021-02185-9

Toward a common set of functional traits for soil protists

Auteurs: Giachello, S.; Cantera, I.; Carteron, A.; Marta, S.; Cipriano, C.; Guerrieri, A.; Bonin, A.; Thuiller, W.; Ficetola, G.F.
Publié dans: Soil Biology and Biochemistry, Numéro 187, 2023, Page(s) 109207, ISSN 0038-0717
Éditeur: Pergamon Press Ltd.
DOI: 10.1016/j.soilbio.2023.109207

Climate and land-use changes drive biodiversity turnover in arthropod assemblages over 150 years.

Auteurs: Silvio Marta; Michele Brunetti; Raoul Manenti; Antonello Provenzale; Gentile Francesco Ficetola
Publié dans: Nature Ecology & Evolution, Numéro 5, 2021, Page(s) 1291-1300, ISSN 2397-334X
Éditeur: Nature Publishing Group
DOI: 10.1038/s41559-021-01513-0

Comparison of markers for the monitoring of freshwater benthic biodiversity through DNA metabarcoding

Auteurs: Gentile Francesco Ficetola, Frédéric Boyer, Alice Valentini, Aurélie Bonin, Albin Meyer, Tony Dejean, Coline Gaboriaud, Philippe Usseglio‐Polatera, Pierre Taberlet
Publié dans: Molecular Ecology, 2020, ISSN 0962-1083
Éditeur: Blackwell Publishing Inc.
DOI: 10.1111/mec.15632

Metabarcoding data reveal vertical multi-taxa variation in topsoil communities during the colonization of deglaciated forelands

Auteurs: Alessia Guerrieri; Alexis Carteron; Aurélie Bonin; Silvio Marta; Roberto Ambrosini; Marco Caccianiga; Isabel Cantera; Chiara Compostella; Guglielmina Diolaiuti; Diego Fontaneto; Ludovic Gielly; Fabrizio Gili; Mauro Gobbi; Jerome Poulenard; Pierre Taberlet; Andrea Zerboni; Wilfried Thuiller; Gentile Francesco Ficetola
Publié dans: Molecular Ecology, Numéro 31, 2022, ISSN 1365-294X
Éditeur: John Wiley & Sons
DOI: 10.1111/mec.16669

The Retreat of Mountain Glaciers since the Little Ice Age: A Spatially Explicit Database

Auteurs: Silvio Marta; Roberto Sergio Azzoni; Davide Fugazza; Levan Tielidze; Pritam Chand; Katrin Sieron; Peter Almond; Roberto Ambrosini; Fabien Anthelme; Pablo Alviz Gazitúa; Rakesh Bhambri; Aurélie Bonin; Marco Caccianiga; Sophie Cauvy-Fraunié; Jorge Luis Ceballos Lievano; John Clague; Justiniano Alejo Cochachín Rapre; Olivier Dangles; Philip Deline; Andre Eger; Rolando Cruz Encarnación; Sergey Er
Publié dans: Data, Numéro 6, 2021, Page(s) 10.3390/data6100107, ISSN 2306-5729
Éditeur: MDPI
DOI: 10.3390/data6100107

Towards all-inclusive community ecology via DNA metabarcoding

Auteurs: Gentile Francesco Ficetola; Pierre Taberlet
Publié dans: Molecular Ecology, Numéro 32, 2023, Page(s) 6320-6329, ISSN 0962-1083
Éditeur: Blackwell Publishing Inc.
DOI: 10.1111/mec.16881

Immersive and virtual tools to see and understand climate change impacts on glaciers: a new challenge for scientific dissemination and inclusive education

Auteurs: Diolaiuti, G.; Maugeri, M.; Senese, A.; Panizza, M.; Ambrosini, R.; Ficetola, G.F.; Parolini, M.; Fugazza, D.; Traversa, G.; Scaccia, D.; Franceschini, M.; Citron, L.; Pelfini, M.
Publié dans: Geografia Fisica e Dinamica Quaternaria, Numéro 44, 2022, Page(s) 83-93, ISSN 0391-9838
Éditeur: Comitato Glaciologico Italiano
DOI: 10.4461/gfdq.2021.44.6

Lack of data on the colonization by Amphibians and Reptiles of the ecosystems developing after retreat of glaciers.

Auteurs: G.F. Ficetola
Publié dans: Naturalista Siciliano, Numéro 46, 2022, Page(s) 203-206, ISSN 0394-0063
Éditeur: Società Siciliana di Scienze Naturali
DOI: 10.5281/zenodo.6787208

Environmental DNA of insects and springtails from caves reveals complex processes of eDNA transfer in soils

Auteurs: Lunghi, E.; Valle, B.; Guerrieri, A.; Bonin, A.; Cianferoni, F.; Manenti, R.; Ficetola, G.F.
Publié dans: Science of the Total Environment, Numéro 826, 2022, Page(s) 154022, ISSN 0048-9697
Éditeur: Elsevier BV
DOI: 10.1016/j.scitotenv.2022.154022

Cryophilic Tardigrada have disjunct and bipolar distribution and establish long-term stable, low-density demes

Auteurs: Zawierucha K.; Kašparová E.S.; McInnes S.; Budam J.; Ambrosini R.; Devetter M.; Ficetola G.F.; Franzetti A.; Takeuchi N.; Horna P.; Jaroměřská T.N.; Ono M.; Šabacká M.; Janko K.
Publié dans: Polar Biology, Numéro 46, 2023, Page(s) 1011–1027, ISSN 0722-4060
Éditeur: Springer Verlag
DOI: 10.1007/s00300-023-03170-4

Conditionally autoregressive models improve occupancy analyses of autocorrelated data: An example with environmental DNA

Auteurs: Wentao Chen, Gentile Francesco Ficetola
Publié dans: Molecular Ecology Resources, Numéro 19/1, 2019, Page(s) 163-175, ISSN 1755-098X
Éditeur: Blackwell Publishing Inc.
DOI: 10.1111/1755-0998.12949

Continental‐scale determinants of population trends in European amphibians and reptiles

Auteurs: Mattia Falaschi, Raoul Manenti, Wilfried Thuiller, Gentile Francesco Ficetola
Publié dans: Global Change Biology, Numéro 25/10, 2019, Page(s) 3504-3515, ISSN 1354-1013
Éditeur: Blackwell Publishing Inc.
DOI: 10.1111/gcb.14739

DNA metabarcoding—Need for robust experimental designs to draw sound ecological conclusions

Auteurs: Lucie Zinger, Aurélie Bonin, Inger G. Alsos, Miklós Bálint, Holly Bik, Frédéric Boyer, Anthony A. Chariton, Simon Creer, Eric Coissac, Bruce E. Deagle, Marta De Barba, Ian A. Dickie, Alex J. Dumbrell, Gentile Francesco Ficetola, Noah Fierer, Luca Fumagalli, M. Thomas P. Gilbert, Simon Jarman, Ari Jumpponen, Håvard Kauserud, Ludovic Orlando, Johan Pansu, Jan Pawlowski, Leho Tedersoo, Philip F
Publié dans: Molecular Ecology, Numéro 28/8, 2019, Page(s) 1857-1862, ISSN 0962-1083
Éditeur: Blackwell Publishing Inc.
DOI: 10.1111/mec.15060

Climate and land-use changes drive taxonomic and functional biodiversity through time

Auteurs: Silvio Marta; Michele Brunetti; Raoul Manenti; Antonello Provenzale; Gentile Francesco Ficetola
Publié dans: Nature Ecology & Evolution, Numéro 5, 2021, Page(s) 1291–1300, ISSN 2397-334X
Éditeur: Nature Research
DOI: 10.1038/s41559-021-01513-0

Topsoil organic matter build‐up in glacier forelands around the world

Auteurs: Norine Khedim, Lauric Cécillon, Jérôme Poulenard, Pierre Barré, François Baudin, Silvio Marta, Antoine Rabatel, Cédric Dentant, Sophie Cauvy‐Fraunié, Fabien Anthelme, Ludovic Gielly, Roberto Ambrosini, Andrea Franzetti, Roberto Sergio Azzoni, Marco Stefano Caccianiga, Chiara Compostella, John Clague, Levan Tielidze, Erwan Messager, Philippe Choler, Gentile Francesco Ficetola
Publié dans: Global Change Biology, Numéro 27/8, 2021, Page(s) 1662-1677, ISSN 1354-1013
Éditeur: Blackwell Publishing Inc.
DOI: 10.1111/gcb.15496

Cryoconite – From minerals and organic matter to bioengineered sediments on glacier's surfaces

Auteurs: Rozwalak, Piotr; Podkowa, Paweł; Buda, Jakub; Niedzielski, Przemysław; Kawecki, Szymon; Ambrosini, Roberto; Azzoni, Roberto S.; Baccolo, Giovanni; Ceballos, Jorge L.; Cook, Joseph; Di Mauro, Biagio; Ficetola, Gentile Francesco; Franzetti, Andrea; Ignatiuk, Dariusz; Klimaszyk, Piotr; Łokas, Edyta; Ono, Masato; Parnikoza, Ivan; Pietryka, Mirosława; Pittino, Francesca; Poniecka, Ewa; Porazinska,
Publié dans: Science of The Total Environment, Numéro 807, 2022, Page(s) 150874, ISSN 0048-9697
Éditeur: Elsevier BV
DOI: 10.1016/j.scitotenv.2021.150874

In silico assessment of 18S rDNA metabarcoding markers for the characterization of nematode communities

Auteurs: Ficetola, G.F.; Guerrieri, A.; Cantera, I.; Bonin, A.
Publié dans: Plos One, Numéro 10, 2024, Page(s) e0298905, ISSN 1932-6203
Éditeur: Public Library of Science
DOI: 10.1371/journal.pone.0298905

Desoria calderonis sp. nov., a new species of alpine cryophilic springtail (Collembola: Isotomidae) from Apennines (Italy), with phylogenetic and ecological considerations

Auteurs: Valle, B.; Cucini, C.; Nardi, F.; Caccianiga, M.; Gobbi, M.; Di Musciano, M.; Carapelli, A.; Ficetola, G.F.; Guerrieri, A.; Fanciulli, P.P.
Publié dans: European Journal of Taxonomy, Numéro 787, 2021, Page(s) 32–52, ISSN 2118-9773
Éditeur: EJT
DOI: 10.5852/ejt.2021.787.1599

Shifting aspect or elevation? The climate change response of ectotherms in a complex mountain topography

Auteurs: Stephan Feldmeier, Benedikt R. Schmidt, Niklaus E. Zimmermann, Michael Veith, Gentile Francesco Ficetola, Stefan Lötters
Publié dans: Diversity and Distributions, Numéro 26/11, 2020, Page(s) 1483-1495, ISSN 1366-9516
Éditeur: Blackwell Publishing Inc.
DOI: 10.1111/ddi.13146

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