Mucus-Penetrating Microbiota: Characterization, Mechanism and Therapeutic in Metabolic Disease

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Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Publications

Tolerogenic Dendritic Cells Shape a Transmissible Gut Microbiota that Protects from Metabolic Diseases

Author(s): Emelyne Lécuyer, Tiphaine Le Roy, Aurélie Gestin, Amélie Lacombe, Catherine Philippe, Maharajah Ponnaiah, Jean-Baptiste Huré, Magali Fradet, Farid Ichou, Samira Boudebbouze, Thierry Huby, Emmanuel Gautier, Moez Rhimi, Emmanuelle Maguin, Nathalie Kapel, Philippe Gérard, Nicolas Venteclef, Michèle Garlatti, Benoit Chassaing, Philippe Lesnik
Published in: Diabetes, 2024, ISSN 1939-327X
Publisher: Diabetes
DOI: 10.1101/2020.10.22.350033

Diet standardization reduces intra-individual microbiome variation

Author(s): Clara Delaroque, Gary D. Wu, Charlene Compher, Josephine Ni, Lindsey Albenberg, Qing Liu, Yuan Tian, Andrew D. Patterson, James D. Lewis, Andrew T. Gewirtz, Benoit Chassaing
Published in: Gut Microbes, Issue 14, 2025, ISSN 1949-0976
Publisher: Landes Bioscience
DOI: 10.1080/19490976.2022.2149047

Soluble Fiber Inulin Consumption Limits Alterations of the Gut Microbiota and Hepatic Fatty Acid Metabolism Caused by High-Fat Diet

Author(s): Mayssa Albouery, Alexis Bretin, Bénédicte Buteau, Stéphane Grégoire, Lucy Martine, Ségolène Gambert, Alain M. Bron, Niyazi Acar, Benoit Chassaing, Marie-Agnès Bringer
Published in: Nutrients, Issue 13/3, 2021, Page(s) 1037, ISSN 2072-6643
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/nu13031037

Brain effects of gestating germ-free persist in mouse neonates despite acquisition of a microbiota at birth

Author(s): Alexandra Castillo-Ruiz, Aviva Gars, Hannah Sturgeon, Nicole M. Ronczkowski, Dhanya N. Pyaram, Charlène J. G. Dauriat, Benoit Chassaing, Nancy G. Forger
Published in: Frontiers in Neuroscience, Issue 17, 2023, ISSN 1662-453X
Publisher: Frontiers in Neuroscience
DOI: 10.3389/fnins.2023.1130347

Local Delivery of Streptomycin in Microcontainers Facilitates Colonization of Streptomycin-Resistant Escherichia coli in the Rat Colon

Author(s): Anders M. Torp, Khorshid Kamguyan, Juliane F. Christfort, Katja Ann Kristensen, Priscila Guerra, Noëmie Daniel, Line Hagner Nielsen, Kinga Zòr, Benoit Chassaing, Anja Boisen, Martin I. Bahl, Tine Rask Licht
Published in: Applied and Environmental Microbiology, Issue 88, 2022, ISSN 0099-2240
Publisher: American Society for Microbiology
DOI: 10.1128/aem.00734-22

Angry bugs! Dysbiotic intestinal microbiota promotes aggressive behaviors

Author(s): Andrew T. Gewirtz, Benoit Chassaing
Published in: Brain, Behavior, and Immunity, Issue 123, 2025, Page(s) 884-885, ISSN 0889-1591
Publisher: Academic Press
DOI: 10.1016/j.bbi.2024.10.041

Individualized microbiotas dictate the impact of dietary fiber on colitis sensitivity

Author(s): Erica Bonazzi 1 , Alexis Bretin 2 , Lucile Vigué 3 , Fuhua Hao 4 , Andrew D Patterson 3 , Andrew T Gewirtz 2 , Benoit Chassaing 5
Published in: Microbiome, 2024, ISSN 2049-2618
Publisher: Microbiome
DOI: 10.1186/s40168-023-01724-6

Fecal dysbiosis associated with colonic hypersensitivity and behavioral alterations in chronically Blastocystis-infected rats

Author(s): Manon Defaye, Céline Nourrisson, Elodie Baudu, Amandine Lashermes, Maëva Meynier, Mathieu Meleine, Ivan Wawrzyniak, Virginie Bonnin, Julie Barbier, Benoit Chassaing, Catherine Godfraind, Agathe Gelot, Nicolas Barnich, Denis Ardid, Mathilde Bonnet, Frédéric Delbac, Frédéric Antonio Carvalho, Philippe Poirier
Published in: Scientific Reports, Issue 10/1, 2020, ISSN 2045-2322
Publisher: Nature Publishing Group
DOI: 10.1038/s41598-020-66156-w

Dietary fiber guar gum-induced shift in gut microbiota metabolism and intestinal immune activity enhances susceptibility to colonic inflammation

Author(s): Devendra Paudel 1 , Divek V T Nair 1 , Sangshan Tian 1 , Fuhua Hao 2 , Umesh K Goand 1 , Grace Joseph 1 , Eleni Prodes 1 , Zhi Chai 3 , Chloé E M Robert 4 5 , Benoit Chassaing 4 5 , Andrew D Patterson 2 , Vishal Singh 1
Published in: Gut Microbes, 2024, ISSN 1949-0984
Publisher: Gut Microbes
DOI: 10.1080/19490976.2024.2341457

MiniBioReactor Array (MBRA) in vitro gut model: a reliable system to study microbiota-dependent response to antibiotic treatment

Author(s): C A Hobson, L Vigue, S Naimi, B Chassaing, M Magnan, S Bonacorsi, B Gachet, I El Meouche, A Birgy, O Tenaillon
Published in: JAC-Antimicrobial Resistance, Issue 4, 2022, ISSN 2632-1823
Publisher: JAC-Antimicrobial Resistance
DOI: 10.1093/jacamr/dlac077

Critical Role of Innate Immunity to Flagellin in the Absence of Adaptive Immunity

Author(s): Jun Zou, Xu Zhao, Zhenda Shi, Zhan Zhang, Matam Vijay-Kumar, Benoit Chassaing, Andrew T Gewirtz
Published in: The Journal of Infectious Diseases, Issue 223/8, 2020, Page(s) 1478-1487, ISSN 0022-1899
Publisher: University of Chicago Press
DOI: 10.1093/infdis/jiaa521

Fecal let-7b and miR-21 directly modulate the intestinal microbiota, driving chronic inflammation

Author(s): Maite Casado-Bedmar, Maryline Roy, Louis Berthet, Jean-Pierre Hugot, Chunhua Yang, Hana Manceau, Katell Peoc’h, Benoit Chassaing, Didier Merlin, Emilie Viennois
Published in: Gut Microbes, Issue 16, 2024, ISSN 1949-0976
Publisher: Landes Bioscience
DOI: 10.1080/19490976.2024.2394249

In vitromicrobiota model recapitulates and predicts individualised sensitivity to dietary emulsifier

Author(s): Héloïse Rytter, Sabrine Naimi, Gary Wu, Jim Lewis, Maeva Duquesnoy, Lucile Vigué, Olivier Tenaillon, Eugeni Belda, Marta Vazquez-Gomez, Nina Touly, Djésia Arnone, Fuhua Hao, Ruth E Ley, Karine Clément, Laurent Peyrin-Biroulet, Andrew D Patterson, Andrew T Gewirtz, Benoit Chassaing
Published in: Gut, 2025, Page(s) gutjnl-2024-333925, ISSN 0017-5749
Publisher: BMJ Publishing Group
DOI: 10.1136/gutjnl-2024-333925

Dietary Emulsifiers Exacerbate Food Allergy and Colonic Type 2 Immune Response through Microbiota Modulation

Author(s): Akihito Harusato, Benoit Chassaing, Charlène J. G. Dauriat, Chihiro Ushiroda, Wooseok Seo, Yoshito Itoh
Published in: Nutrients, Issue 14, 2024, Page(s) 4983, ISSN 2072-6643
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/nu14234983

Inulin Fermentable Fiber Ameliorates Type I Diabetes via IL22 and Short-Chain Fatty Acids in Experimental Models

Author(s): Jun Zou, Lavanya Reddivari, Zhenda Shi, Shiyu Li, Yanling Wang, Alexis Bretin, Vu L. Ngo, Michael Flythe, Michael Pellizzon, Benoit Chassaing, Andrew T. Gewirtz
Published in: Cellular and Molecular Gastroenterology and Hepatology, 2021, ISSN 2352-345X
Publisher: Elsevier Inc.
DOI: 10.1016/j.jcmgh.2021.04.014

Commensal epitopes drive differentiation of colonic T regs

Author(s): Michal P. Kuczma, Edyta A. Szurek, Anna Cebula, Benoit Chassaing, Yu-Jin Jung, Sang-Moo Kang, James G. Fox, Bärbel Stecher, Leszek Ignatowicz
Published in: Science Advances, Issue 6/16, 2020, Page(s) eaaz3186, ISSN 2375-2548
Publisher: Science Advances
DOI: 10.1126/sciadv.aaz3186

Lipocalin 2 deficiency-induced gut microbiota dysbiosis evokes metabolic syndrome in aged mice

Author(s): Vishal Singh, Sarah Galla, Rachel M. Golonka, Andrew D. Patterson, Benoit Chassaing, Bina Joe, Matam Vijay-Kumar
Published in: Physiological Genomics, Issue 52, 2020, Page(s) 314-321, ISSN 1094-8341
Publisher: American Physiological Society
DOI: 10.1152/physiolgenomics.00118.2019

Vaccination against microbiota motility protects mice from the detrimental impact of dietary emulsifier consumption

Author(s): Melissa C Kordahi 1 , Clara Delaroque 1 , Marie-Florence Bredèche 2 , Andrew T Gewirtz 3 , Benoit Chassaing 1
Published in: Plos Biology, 2024, ISSN 1544-9173
Publisher: Public Library of Science
DOI: 10.1371/journal.pbio.3002289

Ingestion of probiotic (Lactobacillus helveticus and Bifidobacterium longum) alters intestinal microbial structure and behavioral expression following social defeat stress

Author(s): Katherine A. Partrick, Anna M. Rosenhauer, Jérémie Auger, Amanda R. Arnold, Nicole M. Ronczkowski, Lanaya M. Jackson, Magen N. Lord, Sara M. Abdulla, Benoit Chassaing, Kim L. Huhman
Published in: Scientific Reports, Issue 11/1, 2021, ISSN 2045-2322
Publisher: Nature Publishing Group
DOI: 10.1038/s41598-021-83284-z

IL-22–induced cell extrusion and IL-18–induced cell death prevent and cure rotavirus infection

Author(s): Zhan Zhang, Jun Zou, Zhenda Shi, Benyue Zhang, Lucie Etienne-Mesmin, Yanling Wang, Xuyan Shi, Feng Shao, Benoit Chassaing, Andrew T. Gewirtz
Published in: Science Immunology, Issue 5/52, 2020, Page(s) eabd2876, ISSN 2470-9468
Publisher: Sci Immunol.
DOI: 10.1126/sciimmunol.abd2876

Amelioration of metabolic syndrome by metformin associates with reduced indices of low-grade inflammation independently of the gut microbiota

Author(s): Aneseh Adeshirlarijaney, Jun Zou, Hao Q. Tran, Benoit Chassaing, Andrew T. Gewirtz
Published in: American Journal of Physiology-Endocrinology and Metabolism, Issue 317/6, 2019, Page(s) E1121-E1130, ISSN 0193-1849
Publisher: American Physiological Society
DOI: 10.1152/ajpendo.00245.2019

Enhanced E. coli LF82 Translocation through the Follicle-associated Epithelium in Crohn’s Disease is Dependent on Long Polar Fimbriae and CEACAM6 expression, and Increases Paracellular Permeability

Author(s): Åsa V Keita, Lina Yakymenko Alkaissi, Elin B Holm, Stéphanie D S Heil, Benoit Chassaing, Arlette Darfeuille-Michaud, Derek M McKay, Johan D Söderholm
Published in: Journal of Crohn's and Colitis, Issue 14/2, 2019, Page(s) 216-229, ISSN 1873-9946
Publisher: Elsevier Science
DOI: 10.1093/ecco-jcc/jjz144

Fungal lysozyme leverages the gut microbiota to curb DSS-induced colitis.

Author(s): Ida S. Larsen; Benjamin A. H. Jensen; Benjamin A. H. Jensen; Erica Bonazzi; Béatrice S.-Y. Choi; Nanna N. Kristensen; Esben Gjerløff Wedebye Schmidt; Annika Suenderhauf; Laurence Morin; Peter Bjarke Olsen; Lea Benedicte Skov Hansen; Torsten Schröder; Christian Sina; Benoit Chassaing; André Marette
Published in: Gut Microbes, Issue 1, 2021, ISSN 1949-0976
Publisher: Landes Bioscience
DOI: 10.1080/19490976.2021.1988836

Dietary emulsifier consumption alters gene expression in the amygdala and paraventricular nucleus of the hypothalamus in mice

Author(s): Amanda R. Arnold, Benoit Chassaing, Bradley D. Pearce, Kim L. Huhman
Published in: Scientific Reports, Issue 12, 2022, ISSN 2045-2322
Publisher: Nature Publishing Group
DOI: 10.1038/s41598-022-13021-7

Impact of PepT1 deletion on microbiota composition and colitis requires multiple generations

Author(s): Emilie Viennois, Adani Pujada, Junsik Sung, Chunhua Yang, Andrew T. Gewirtz, Benoit Chassaing, Didier Merlin
Published in: npj Biofilms and Microbiomes, Issue 6/1, 2020, ISSN 2055-5008
Publisher: npj Biofilms and Microbiomes
DOI: 10.1038/s41522-020-0137-y

Food additive emulsifiers and risk of cardiovascular disease in the NutriNet-Santé cohort: prospective cohort study

Author(s): Laury Sellem 1 , Bernard Srour 2 , Guillaume Javaux 1 , Eloi Chazelas 1 , Benoit Chassaing 3 , Emilie Viennois 4 , Charlotte Debras 1 , Clara Salamé 1 , Nathalie Druesne-Pecollo 1 , Younes Esseddik 1 , Fabien Szabo de Edelenyi 1 , Cédric Agaësse 1 , Alexandre De Sa 1 , Rebecca Lutchia 1 , Erwan Louveau 1 , Inge Huybrechts 5 , Fabrice Pierre 6 , Xavier Coumoul 7 , Léopold K Fe
Published in: The BMJ, 2024, ISSN 1756-1833
Publisher: The BMJ
DOI: 10.1136/bmj-2023-076058

“Western Diet”-Induced Adipose Inflammation Requires a Complex Gut Microbiota

Author(s): Hao Q. Tran, Alexis Bretin, Aneseh Adeshirlarijaney, Beng San Yeoh, Matam Vijay-Kumar, Jun Zou, Timothy L. Denning, Benoit Chassaing, Andrew T. Gewirtz
Published in: Cellular and Molecular Gastroenterology and Hepatology, Issue 9/2, 2020, Page(s) 313-333, ISSN 2352-345X
Publisher: Elsevier Inc.
DOI: 10.1016/j.jcmgh.2019.09.009

Western diet promotes endometriotic lesion growth in mice and induces depletion of Akkermansia muciniphila in intestinal microbiota

Author(s): Guillaume Parpex, Benoît Chassaing, Mathilde Bourdon, Pietro Santulli, Ludivine Doridot, Marine Thomas, Frédéric Batteux, Sandrine Chouzenoux, Charles Chapron, Carole Nicco, Louis Marcellin
Published in: BMC Medicine, Issue 22, 2024, ISSN 1741-7015
Publisher: BioMed Central
DOI: 10.1186/s12916-024-03738-9

Obesity promotes fumonisin B1 hepatotoxicity

Author(s): Léonie Dopavogui, Marion Régnier, Arnaud Polizzi, Quentin Ponchon, Sarra Smati, Wendy Klement, Frédéric Lasserre, Céline Lukowicz, Yannick Lippi, Anne Fougerat, Justine Bertrand-Michel, Claire Naylies, Cécile Canlet, Laurent Debrauwer, Elodie Rousseau-Bacquié, Laurence Gamet-Payrastre, Charlène Dauriat, Josefina Casas, Siska Croubels, Siegrid De Baere, Hester M. Burger, Benoit Chassaing, S
Published in: Science of The Total Environment, Issue 891, 2024, Page(s) 164436, ISSN 0048-9697
Publisher: Elsevier BV
DOI: 10.1016/j.scitotenv.2023.164436

Erythroid differentiation regulator-1 induced by microbiota in early life drives intestinal stem cell proliferation and regeneration

Author(s): Hirohito Abo, Benoit Chassaing, Akihito Harusato, Miguel Quiros, Jennifer C. Brazil, Vu L. Ngo, Emilie Viennois, Didier Merlin, Andrew T. Gewirtz, Asma Nusrat, Timothy L. Denning
Published in: Nature Communications, Issue 11/1, 2020, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-019-14258-z

Dietary Inulin Supplementation Affects Specific Plasmalogen Species in the Brain

Author(s): Jean-Baptiste Bizeau, Mayssa Albouery, Stéphane Grégoire, Bénédicte Buteau, Lucy Martine, Marine Crépin, Alain M. Bron, Olivier Berdeaux, Niyazi Acar, Benoit Chassaing, Marie-Agnès Bringer
Published in: Nutrients, Issue 14, 2024, Page(s) 3097, ISSN 2072-6643
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/nu14153097

The gut microbiome is associated with cocaine behavior and predicts addiction vulnerability in adult male rats

Author(s): Gregory J Suess, Jennysue Kasiah, Sierra Simpson, Molly Brennan, Dana Conlisk, Lisa Maturin, Olivier L George, Benoit Chassaing, Kyle J Frantz
Published in: biorxiv, 2021, ISSN 2692-8205
Publisher: biorxiv
DOI: 10.1101/2021.07.20.453110

A Listeria monocytogenes Bacteriocin Can Target the Commensal Prevotella copri and Modulate Intestinal Infection

Author(s): Nathalie Rolhion, Benoit Chassaing, Marie-Anne Nahori, Jana de Bodt, Alexandra Moura, Marc Lecuit, Olivier Dussurget, Marion Bérard, Massimo Marzorati, Hannah Fehlner-Peach, Dan R. Littman, Andrew T. Gewirtz, Tom Van de Wiele, Pascale Cossart
Published in: Cell Host & Microbe, Issue 26, 2022, Page(s) 691-701.e5, ISSN 1931-3128
Publisher: Cell Press
DOI: 10.1016/j.chom.2019.10.016

The TOTUM-63 Supplement and High-Intensity Interval Training Combination Limits Weight Gain, Improves Glycemic Control, and Influences the Composition of Gut Mucosa-Associated Bacteria in Rats on a High Fat Diet

Author(s): Marine Dupuit, Vivien Chavanelle, Benoit Chassaing, Fanny Perriere, Monique Etienne, Claire Plissonneau, Audrey Boscaro, Nicolas Barnich, Vincent Pialoux, Thierry Maugard, Florian Le Joubioux, Sébastien Peltier, Pascal Sirvent, Yolanda F. Otero, Nathalie Boisseau
Published in: Nutrients, Issue 13/5, 2021, Page(s) 1569, ISSN 2072-6643
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/nu13051569

Adaptation of adherent-invasive E. coli to gut environment: Impact on flagellum expression and bacterial colonization ability

Author(s): Gwladys Sevrin; Sébastien Massier; Benoit Chassaing; Allison Agus; Julien Delmas; Jérémy Denizot; Elisabeth Billard; Nicolas Barnich
Published in: Gut Microbes, Issue 1, 2020, ISSN 1949-0984
Publisher: Taylor and Francis Online
DOI: 10.1080/19490976.2017.1421886

Akkermansia muciniphilacounteracts the deleterious effects of dietary emulsifiers on microbiota and host metabolism

Author(s): Noëmie Daniel; Andrew T Gewirtz; Benoit Chassaing
Published in: Gut, Issue 11, 2023, ISSN 1468-3288
Publisher: BMJ Journals
DOI: 10.1136/gutjnl-2021-326835

Dietary Emulsifiers Directly Impact Adherent-Invasive E. coli Gene Expression to Drive Chronic Intestinal Inflammation

Author(s): Emilie Viennois, Alexis Bretin, Philip E. Dubé, Alexander C. Maue, Charlène J.G. Dauriat, Nicolas Barnich, Andrew T. Gewirtz, Benoit Chassaing
Published in: Cell Reports, Issue 33/1, 2020, Page(s) 108229, ISSN 2211-1247
Publisher: Cell Press
DOI: 10.1016/j.celrep.2020.108229

Food additive emulsifiers and the risk of type 2 diabetes: analysis of data from the NutriNet-Santé prospective cohort study

Author(s): Clara Salame 1 , Guillaume Javaux 1 , Laury Sellem 2 , Emilie Viennois 3 , Fabien Szabo de Edelenyi 1 , Cédric Agaësse 1 , Alexandre De Sa 1 , Inge Huybrechts 4 , Fabrice Pierre 5 , Xavier Coumoul 6 , Chantal Julia 7 , Emmanuelle Kesse-Guyot 2 , Benjamin Allès 1 , Léopold K Fezeu 1 , Serge Hercberg 8 , Mélanie Deschasaux-Tanguy 2 , Emmanuel Cosson 9 , Sopio Tatulashvili 9 ,
Published in: Lancet Diabetes Endocrinol, 2024, ISSN 2213-8587
Publisher: Elsevier BV
DOI: 10.1016/s2213-8587(24)00086-x

Dietary fat and low fiber in purified diets differently impact the gut-liver axis to promote obesity-linked metabolic impairments.

Author(s): Noëmie Daniel; Laίs Rossi Perazza; Thibault V. Varin; Jocelyn Trottier; Bruno Marcotte; Philippe St-Pierre; Olivier Barbier; Benoit Chassaing; André Marette
Published in: American Journal of Physiology - Gastrointestinal and Liver Physiology, Issue 3, 2021, ISSN 0193-1857
Publisher: American Physiological Society
DOI: 10.1152/ajpgi.00028.2021

Prognostic value of a combination of innovative factors (gut microbiota, sarcopenia, obesity, metabolic syndrome) to predict surgical/oncologic outcomes following surgery for sporadic colorectal cancer: a prospective cohort study protocol (METABIOTE)

Author(s): Julie Veziant, Karine Poirot, Caroline Chevarin, Lucie Cassagnes, Pierre Sauvanet, Benoit Chassaing, Frederic Robin, Catherine Godfraind, Nicolas Barnich, Denis Pezet, Bruno Pereira, Johan Gagniere, Mathilde Bonnet
Published in: BMJ Open, Issue 10/1, 2020, Page(s) e031472, ISSN 2044-6055
Publisher: BMJ Publishing Group
DOI: 10.1136/bmjopen-2019-031472

Minibioreactor arrays to model microbiome response to alcohol and tryptophan in the context of alcohol-associated liver disease

Author(s): Anne-Marie Cassard, Wanchao Hu, Sabrine Naimi, Nicolas Trainel, Vanessa Liévin-Le Moal, Gabriel Perlemuter, Benoit Chassaing, Dragos Ciocan
Published in: NPJ Biofilm Microbiome, 2024, ISSN 2055-5008
Publisher: NPJ Biofilms and Microbiomes
DOI: 10.21203/rs.3.rs-4383814/v1

Social overcrowding impacts gut microbiota, promoting stress, inflammation, and dysglycemia.

Author(s): Clara Delaroque; Mélissa Chervy; Andrew T. Gewirtz; Benoit Chassaing
Published in: Gut Microbes, Issue 3, 2021, ISSN 1949-0976
Publisher: Landes Bioscience
DOI: 10.1080/19490976.2021.2000275

Effect of Concurrent Training on Body Composition and Gut Microbiota in Postmenopausal Women with Overweight or Obesity

Author(s): MARINE DUPUIT, MÉLANIE RANCE, CLAIRE MOREL, PATRICE BOUILLON, AUDREY BOSCARO, VINCENT MARTIN, EMILIE VAZEILLE, NICOLAS BARNICH, BENOIT CHASSAING, NATHALIE BOISSEAU
Published in: Medicine & Science in Sports & Exercise, Issue 54, 2023, Page(s) 517-529, ISSN 0195-9131
Publisher: Lippincott Williams & Wilkins Ltd.
DOI: 10.1249/mss.0000000000002809

Beneficial Effects of Linseed Supplementation on Gut Mucosa-Associated Microbiota in a Physically Active Mouse Model of Crohn’s Disease

Author(s): Claire Plissonneau, Adeline Sivignon, Benoit Chassaing, Frederic Capel, Vincent Martin, Monique Etienne, Ivan Wawrzyniak, Pierre Chausse, Frederic Dutheil, Guillaume Mairesse, Guillaume Chesneau, Nathalie Boisseau, Nicolas Barnich
Published in: International Journal of Molecular Sciences, Issue 23, 2024, Page(s) 5891, ISSN 1422-0067
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ijms23115891

The postnatal window is critical for the development of sex-specific metabolic and gut microbiota outcomes in offspring.

Author(s): Laurence Daoust; Béatrice S.-Y. Choi; Sébastien Lacroix; Vanessa Vilela; Thibault V. Varin; Stéphanie Dudonné; Geneviève Pilon; Denis Roy; Emile Levy; Emile Levy; Yves Desjardins; Benoit Chassaing; André Marette
Published in: Gut Microbes, Issue 1, 2021, ISSN 1949-0976
Publisher: Landes Bioscience
DOI: 10.1080/19490976.2021.2004070

Randomized Controlled-Feeding Study of Dietary Emulsifier Carboxymethylcellulose Reveals Detrimental Impacts on the Gut Microbiota and Metabolome

Author(s): Benoit Chassaing 1 , Charlene Compher 2 , Brittaney Bonhomme 3 , Qing Liu 4 , Yuan Tian 4 , William Walters 5 , Lisa Nessel 6 , Clara Delaroque 7 , Fuhua Hao 4 , Victoria Gershuni 8 , Lillian Chau 9 , Josephine Ni 9 , Meenakshi Bewtra 10 , Lindsey Albenberg 11 , Alexis Bretin 12 , Liam McKeever 3 , Ruth E Ley 5 , Andrew D Patterson 4 , Gary D Wu 9 , Andrew T Gewirtz 13 , James
Published in: Gastroenterology, 2022, ISSN 0016-5085
Publisher: W. B. Saunders Co., Ltd.
DOI: 10.1053/j.gastro.2021.11.006

Food additive emulsifiers and cancer risk: Results from the French prospective NutriNet-Santé cohort

Author(s): Laury Sellem 1 2 , Bernard Srour 1 2 , Guillaume Javaux 1 , Eloi Chazelas 1 2 , Benoit Chassaing 2 3 , Emilie Viennois 4 , Charlotte Debras 1 2 , Nathalie Druesne-Pecollo 1 2 , Younes Esseddik 1 , Fabien Szabo de Edelenyi 1 , Nathalie Arnault 1 , Cédric Agaësse 1 , Alexandre De Sa 1 , Rebecca Lutchia 1 , Inge Huybrechts 5 , Augustin Scalbert 5 , Fabrice Pierre 2 6
Published in: Plos Medicine, 2024, ISSN 1549-1277
Publisher: Public Library of Science
DOI: 10.1371/journal.pmed.1004338

Mirroring Amino Acids Hold Sway to Scare Pathobionts Away

Author(s): Jeremy Denizot, Benoit Chassaing
Published in: Cellular and Molecular Gastroenterology and Hepatology, Issue 16, 2023, Page(s) 1038-1039, ISSN 2352-345X
Publisher: Elsevier Inc.
DOI: 10.1016/j.jcmgh.2023.09.009

Hyaluronan nanoplatelets exhibit extended residence time compared to spherical and ellipsoidal nanomaterials with equivalent surface potentials and volumes after oral delivery in rats

Author(s): Hicheme Hadji, Catherine Cailleau, Benoit Chassaing, Mickaël Bourge, Gilles Ponchel, Kawthar Bouchemal
Published in: Biomaterials Science, Issue 12, 2024, Page(s) 5812-5823, ISSN 2047-4830
Publisher: Royal Society of Chemistry
DOI: 10.1039/d4bm00672k

Microbiome differences related to metformin intolerance among Black individuals with diabetes, a pilot cross-sectional study

Author(s): Maya Fayfman 1 2 , Andrew T Gewirtz 3 , Clara Delaroque 4 , Gerardo Blanco 1 2 , Seid Gibanica 1 2 , Shanthi Srinivasan 5 , Benoit Chassaing 4
Published in: Matabolism Open, 2024, ISSN 2589-9368
Publisher: Matabolism Open
DOI: 10.1016/j.metop.2023.100256

A Microbiota-Dependent Response to Anticancer Treatment in an In Vitro Human Microbiota Model: A Pilot Study With Hydroxycarbamide and Daunorubicin

Author(s): Claire Amaris Hobson, Lucile Vigué, Mélanie Magnan, Benoit Chassaing, Sabrine Naimi, Benoit Gachet, Pauline Claraz, Thomas Storme, Stephane Bonacorsi, Olivier Tenaillon, André Birgy
Published in: Frontiers in Cellular and Infection Microbiology, Issue 12, 2023, ISSN 2235-2988
Publisher: Frontiers Media S. A.
DOI: 10.3389/fcimb.2022.886447

The Intestinal Microbiota: Our Best Frenemy in Radiation-Induced Damages?

Author(s): Melissa C. Kordahi, Benoit Chassaing
Published in: Cell Host & Microbe, Issue 29/1, 2021, Page(s) 7-9, ISSN 1931-3128
Publisher: Cell Press
DOI: 10.1016/j.chom.2020.12.013

10.1186/s12934-024-02449-3.

Author(s): Luis G Bermúdez-Humarán 1 , Benoit Chassaing 2 3 , Philippe Langella 4
Published in: Microbial cell factories, 2024, ISSN 1475-2859
Publisher: BioMed Central
DOI: 10.1186/s12934-024-02449-3

Flagellin-elicited adaptive immunity suppresses flagellated microbiota and vaccinates against chronic inflammatory diseases

Author(s): Hao Q. Tran, Ruth E. Ley, Andrew T. Gewirtz, Benoit Chassaing
Published in: Nature Communications, Issue 10/1, 2019, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-019-13538-y

Consumption of Select Dietary Emulsifiers Exacerbates the Development of Spontaneous Intestinal Adenoma

Author(s): Emilie Viennois, Benoit Chassaing
Published in: International Journal of Molecular Sciences, Issue 22/5, 2021, Page(s) 2602, ISSN 1422-0067
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ijms22052602

Ultra-processed foods and food additives in gut health and disease

Author(s): Kevin Whelan 1 , Aaron S Bancil 2 , James O Lindsay 3 , Benoit Chassaing 4
Published in: Nature Review Gastroenterology and Hepatology, 2024, ISSN 1759-5045
Publisher: Nature Publishing Group
DOI: 10.1038/s41575-024-00893-5

High-Intensity Interval Training and α-Linolenic Acid Supplementation Improve DHA Conversion and Increase the Abundance of Gut Mucosa-Associated Oscillospira Bacteria

Author(s): Claire Plissonneau, Frederic Capel, Benoit Chassaing, Marine Dupuit, Florie Maillard, Ivan Wawrzyniak, Lydie Combaret, Frederic Dutheil, Monique Etienne, Guillaume Mairesse, Guillaume Chesneau, Nicolas Barnich, Nathalie Boisseau
Published in: Nutrients, Issue 13/3, 2021, Page(s) 788, ISSN 2072-6643
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/nu13030788

Human Intestinal Microbiome Determines Individualized Inflammatory Response to Dietary Emulsifier Carboxymethylcellulose Consumption

Author(s): Noëmie Daniel 1 , Gary D Wu 2 , William Walters 3 , Charlene Compher 4 , Josephine Ni 2 , Clara Delaroque 1 , Lindsey Albenberg 5 , Ruth E Ley 3 , Andrew D Patterson 6 , James D Lewis 7 , Andrew T Gewirtz 8 , Benoit Chassaing 9
Published in: Cellular and Molecular Gastroenterology and Hepatology, 2024, ISSN 2352-345X
Publisher: Elsevier Inc.
DOI: 10.1016/j.jcmgh.2023.11.001

Probiotic: is diet part of the efficacy equation?

Author(s): Héloïse Rytter, Emilie Combet, Benoit Chassaing
Published in: Gut Microbes, Issue 15, 2024, ISSN 1949-0976
Publisher: Landes Bioscience
DOI: 10.1080/19490976.2023.2222438

IL-22–induced cell extrusion and IL-18–induced cell death prevent and cure rotavirus infection

Author(s): Zhan Zhang; Jun Zou; Zhenda Shi; Benyue Zhang; Lucie Etienne-Mesmin; Lucie Etienne-Mesmin; Yanling Wang; Xuyan Shi; Feng Shao; Benoit Chassaing; Andrew T. Gewirtz
Published in: Science Immunology, Issue 1, 2021, ISSN 2470-9468
Publisher: American Association for the Advancement of Science
DOI: 10.1126/sciimmunol.abd2876

Dietary emulsifier consumption accelerates type 1 diabetes development in NOD mice

Author(s): Clara Delaroque 1 , Benoit Chassaing 2
Published in: NPJ Biofilms Microbiomes, 2024, ISSN 2055-5008
Publisher: NPJ Biofilms Microbiomes
DOI: 10.1038/s41522-023-00475-4

Beneficial Effects of Natural Mineral Waters on Intestinal Inflammation and the Mucosa-Associated Microbiota

Author(s): Nicolas Barnich, Michael Rodrigues, Pierre Sauvanet, Caroline Chevarin, Sylvain Denis, Olivier Le Goff, Danielle Faure-Imbert, Thierry Hanh, Christian F Roques, Benoit Chassaing, Monique Alric
Published in: International Journal of Molecular Sciences, Issue 22/9, 2021, Page(s) 4336, ISSN 1422-0067
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ijms22094336

The intestinal microbiota regulates host cholesterol homeostasis

Author(s): Tiphaine Le Roy, Emelyne Lécuyer, Benoit Chassaing, Moez Rhimi, Marie Lhomme, Samira Boudebbouze, Farid Ichou, Júlia Haro Barceló, Thierry Huby, Maryse Guerin, Philippe Giral, Emmanuelle Maguin, Nathalie Kapel, Philippe Gérard, Karine Clément, Philippe Lesnik
Published in: BMC Biology, Issue 17/1, 2019, ISSN 1741-7007
Publisher: BioMed Central
DOI: 10.1186/s12915-019-0715-8

Connecting the Dots: Dietary Fat, Microbiota Dysbiosis, Altered Metabolome, and Colon Cancer

Author(s): Emilie Viennois 1 , Andrew T Gewirtz 2 , Benoit Chassaing 3
Published in: Gastroenterology, 2023, ISSN 0016-5085
Publisher: W. B. Saunders Co., Ltd.
DOI: 10.1053/j.gastro.2021.10.018

Direct impact of commonly used dietary emulsifiers on human gut microbiota

Author(s): Sabrine Naimi, Emilie Viennois, Andrew T. Gewirtz, Benoit Chassaing
Published in: Microbiome, Issue 9/1, 2021, ISSN 2049-2618
Publisher: Microbiome
DOI: 10.1186/s40168-020-00996-6

Food Additive Emulsifiers and Their Impact on Gut Microbiome, Permeability, and Inflammation: Mechanistic Insights in Inflammatory Bowel Disease

Author(s): Aaron S Bancil, Alicia M Sandall, Megan Rossi, Benoit Chassaing, James O Lindsay, Kevin Whelan
Published in: Journal of Crohn's and Colitis, 2020, ISSN 1873-9946
Publisher: Elsevier Science
DOI: 10.1093/ecco-jcc/jjaa254

Organ-level protein networks as a reference for the host effects of the microbiome

Author(s): Robert H. Mills, Jacob M. Wozniak, Alison Vrbanac, Anaamika Campeau, Benoit Chassaing, Andrew Gewirtz, Rob Knight, David J. Gonzalez
Published in: Genome Research, Issue 30/2, 2020, Page(s) 276-286, ISSN 1088-9051
Publisher: Cold Spring Harbor Laboratory Press
DOI: 10.1101/gr.256875.119

Microbiota fermentation-NLRP3 axis shapes the impact of dietary fibres on intestinal inflammation

Author(s): Vishal Singh, Beng San Yeoh, Rachel E Walker, Xia Xiao, Piu Saha, Rachel M Golonka, Jingwei Cai, Alexis Charles Andre Bretin, Xi Cheng, Qing Liu, Michael D Flythe, Benoit Chassaing, Gregory C Shearer, Andrew D Patterson, Andrew T Gewirtz, Matam Vijay-Kumar
Published in: Gut, Issue 68/10, 2019, Page(s) 1801-1812, ISSN 0017-5749
Publisher: BMJ Publishing Group
DOI: 10.1136/gutjnl-2018-316250

Segmented Filamentous Bacteria Prevent and Cure Rotavirus Infection

Author(s): Zhenda Shi, Jun Zou, Zhan Zhang, Xu Zhao, Juan Noriega, Benyue Zhang, Chunyu Zhao, Harshad Ingle, Kyle Bittinger, Lisa M. Mattei, Andrea J. Pruijssers, Richard K. Plemper, Timothy J. Nice, Megan T. Baldridge, Terence S. Dermody, Benoit Chassaing, Andrew T. Gewirtz
Published in: Cell, Issue 179/3, 2019, Page(s) 644-658.e13, ISSN 0092-8674
Publisher: Cell Press
DOI: 10.1016/j.cell.2019.09.028

Vers un vaccin contre les maladies inflammatoires chroniques ?

Author(s): Sabrine Naimi, Benoit Chassaing
Published in: médecine/sciences, Issue 36/8-9, 2020, Page(s) 689-691, ISSN 0767-0974
Publisher: Editions E D K
DOI: 10.1051/medsci/2020137

Airway environment drives the selection of quorum sensing mutants and promote Staphylococcus aureus chronic lifestyle

Author(s): Xiongqi Ding, Catherine Robbe-Masselot, Xiali Fu, Renaud Léonard, Benjamin Marsac, Charlene J. G. Dauriat, Agathe Lepissier, Héloïse Rytter, Elodie Ramond, Marion Dupuis, Daniel Euphrasie, Iharilalao Dubail, Cécile Schimmich, Xiaoquan Qin, Jessica Parraga, Maria Leite-de-Moraes, Agnes Ferroni, Benoit Chassaing, Isabelle Sermet-Gaudelus, Alain Charbit, Mathieu Coureuil, Anne Jamet
Published in: Nature Communications, Issue 14, 2023, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-023-43863-2

Host/microbiota interactions in health and diseases—Time for mucosal microbiology!

Author(s): Noëmie Daniel, Emelyne Lécuyer, Benoit Chassaing
Published in: Mucosal Immunology, 2020, ISSN 1933-0219
Publisher: Nature Publishing Group
DOI: 10.1038/s41385-021-00383-w

The Hidden Effect of Nod2 in the Host/Microbiota Relationship

Author(s): Noëmie Daniel, Benoit Chassaing
Published in: Cellular and Molecular Gastroenterology and Hepatology, Issue 10/2, 2020, Page(s) 424-425, ISSN 2352-345X
Publisher: Elsevier Inc.
DOI: 10.1016/j.jcmgh.2020.05.001

Emulsifiers Impact Colonic Length in Mice and Emulsifier Restriction is Feasible in People with Crohn’s Disease

Author(s): Alicia M. Sandall, Selina R. Cox, James O. Lindsay, Andrew T. Gewirtz, Benoit Chassaing, Megan Rossi, Kevin Whelan
Published in: Nutrients, Issue 12/9, 2020, Page(s) 2827, ISSN 2072-6643
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/nu12092827

Tolerogenic Dendritic Cells Shape a Transmissible Gut Microbiota that Protects from Metabolic Diseases

Author(s): Emelyne Lécuyer, Tiphaine Le Roy, Aurélie Gestin, Amélie Lacombe, Catherine Philippe, Maharajah Ponnaiah, Jean-Baptiste Huré, Magali Fradet, Farid Ichou, Samira Boudebbouze, Thierry Huby, Emmanuel Gautier, Moez Rhimi, Emmanuelle Maguin, Nathalie Kapel, Philippe Gérard, Nicolas Venteclef, Michéle Garlatti, Benoit Chassaing, Philippe Lesnik
Published in: Diabetes, 2021, Page(s) db201177, ISSN 0012-1797
Publisher: American Diabetes Association
DOI: 10.2337/db20-1177

Impact of a high-fat diet on the fatty acid composition of the retina

Author(s): Mayssa Albouery, Bénédicte Buteau, Stéphane Grégoire, Lucy Martine, Ségolène Gambert, Alain M. Bron, Niyazi Acar, Benoit Chassaing, Marie-Agnès Bringer
Published in: Experimental Eye Research, Issue 196, 2020, Page(s) 108059, ISSN 0014-4835
Publisher: Academic Press
DOI: 10.1016/j.exer.2020.108059

The Host-Microbiome Response to Hyperbaric Oxygen Therapy in Ulcerative Colitis Patients

Author(s): Carlos G. Gonzalez, Robert H. Mills, Melissa C. Kordahi, Marvic Carrillo-Terrazas, Henry Secaira-Morocho, Christella E. Widjaja, Matthew S. Tsai, Yash Mittal, Brian A. Yee, Fernando Vargas, Kelly Weldon, Julia M. Gauglitz, Clara Delaroque, Consuelo Sauceda, Leigh-Ana Rossitto, Gail Ackermann, Gregory Humphrey, Austin D. Swafford, Corey A. Siegel, Jay C. Buckey, Laura E. Raffals, Charlotte Sadler,
Published in: Cellular and Molecular Gastroenterology and Hepatology, Issue 14, 2023, Page(s) 35-53, ISSN 2352-345X
Publisher: Elsevier Inc.
DOI: 10.1016/j.jcmgh.2022.03.008

Perinatal Morphine Exposure Induces Long-Term Changes in the Intestinal Microbiota of Male and Female Rats

Author(s): Hannah J. Harder, Charlène J.G. Dauriat, Benoit Chassaing, Anne Z. Murphy
Published in: 2023
Publisher: Cold Spring Harbor Laboratory
DOI: 10.1101/2023.09.20.558694

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