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Advancing European Aquaculture by Genome Functional Annotation

Deliverables

AQUA-FAANG website launched

D7.1. AQUA-FAANG website launched, link to website (EFFAB: M3). Can be used to measure achievement of objective 7.3

Project Brochure

D7.3. Project Brochure; document (EFFAB: M8). Can be used to measure achievement of objective 7.3

Development of standardized, optimized and processing efficient lab protocols

D1.1. Development of standardized, optimized and processing efficient lab protocols; written lab protocols describing in detail how to perform library preparation for ATAC-Seq, ChIP-Seq, RNA-Seq and sRNA-Seq (M9). Can be used to measure achievement of objective 1.1.

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Publications

The European Nucleotide Archive in 2020

Author(s): Peter W Harrison, Alisha Ahamed, Raheela Aslam, Blaise T F Alako, Josephine Burgin, Nicola Buso, Mélanie Courtot, Jun Fan, Dipayan Gupta, Muhammad Haseeb, Sam Holt, Talal Ibrahim, Eugene Ivanov, Suran Jayathilaka, Vishnukumar Balavenkataraman Kadhirvelu, Manish Kumar, Rodrigo Lopez, Simon Kay, Rasko Leinonen, Xin Liu, Colman O’Cathail, Amir Pakseresht, Youngmi Park, Stephane Pesant, Nadim Rahm
Published in: Nucleic Acids Research, 2020, ISSN 0305-1048
DOI: 10.1093/nar/gkaa1028

The European Nucleotide Archive in 2019

Author(s): Clara Amid, Blaise T F Alako, Vishnukumar Balavenkataraman Kadhirvelu, Tony Burdett, Josephine Burgin, Jun Fan, Peter W Harrison, Sam Holt, Abdulrahman Hussein, Eugene Ivanov, Suran Jayathilaka, Simon Kay, Thomas Keane, Rasko Leinonen, Xin Liu, Josue Martinez-Villacorta, Annalisa Milano, Amir Pakseresht, Nadim Rahman, Jeena Rajan, Kethi Reddy, Edward Richards, Dmitriy Smirnov, Alexey Sokolov, Sen
Published in: Nucleic Acids Research, 2019, ISSN 0305-1048
DOI: 10.1093/nar/gkz1063

From FAANG to Fork: Application of Highly Annotated Genomes to Improve Farmed Animal Production

Author(s): Clark, Emily L.; Archibald, Alan L.; Daetwyler, Hans D.; AM, Martien Groenen; Harrison, Peter W.; Houston, Ross D.; Kuehn, Christa; Lien, Sigbjorn; Macqueen, Daniel J.; Reecy, James M.; Robledo, Diego; Watson, Mick; Tuggle, Christopher K.; Giuffra, Elisabetta
Published in: https://www.preprints.org/manuscript/202010.0118/v1, Issue 21, 2020, Page(s) 285, ISSN 1465-6906
DOI: 10.20944/preprints202010.0118.v1