Deliverables
The deliverable defines the architecture of extreme-scale analytics that will be employed in INFORE and lays the foundation of the protocols required in the project. The deliverable will detail the technologies that the INFORE architecture will adopt and the required APIs. Special emphasis will be placed on ensuring the pluggable interconnection of all components.
Dissemination PlanThis deliverable will detail the plan for the project dissemination strategy to be adopted throughout the project lifetime.
Life Sciences Use Case: Final Evaluation ReportFinal evaluation report including the results of INFORE prototype on the available data streams
Refined Architecture, Initial System Prototype and Design of Software StacksThe deliverable presents the refined architecture of INFORE, describes a first functional prototype of the generic architecture and analyses its advantages. It also specifies and designs the software stacks that will be released at the end of this WP.
Ethics Management PlanThis deliverable details ethical issues on INFORE and how these will be addressed, including all ethics issues described in Section 5.1. of part B, in this Description of Action B. Issues regarding humans. It will detail the procedures and criteria that will be used to identify/recruit the expert users. More specifically, information on how the consortium will reach these participants (own network, web announcement, social media, press release...), and detailed information on the informed consent procedures that will be implemented. Moreover, it will include templates of project related information.
Interactive Learning and Complex Event Forecasting Technology V2The tools and techniques for largescale distributed interactive learning and for complex event forecasting
Maritime Use Case: Initial Requirements and Scenario DefinitionsThis deliverable contains the initial requirements and the scenario definitions for the maritime use case.
Final System Prototype and Design of Software StacksThe deliverable describes a final functional prototype of the generic architecture and analyses its advantages It also specifies and designs the software stacks that will be released at the end of this WP
Financial Use Case: Initial Requirements and Scenario DefinitionsThis deliverable contains the initial financial stakeholders requirements, and scenario definitions for this use-case.
Data Synopses Generator V2This deliverable provides the final version of the engine for the generation of data synopses from distributed data streams
Life Sciences Use Case: Initial Requirements and Scenario DefinitionsInitial description of the cellular model, including training and testing data, set of applicable computational techniques, alternative models of cell signaling and cell cycle and specific HPC implementation.
Financial Use Case: Final Evaluation ReportFinal evaluation report including the results of INFORE prototype on the available data streams
Final Interactive Learning and Complex Event Forecasting TechnologyThe final version of our tools and techniques for largescale distributed interactive learning and for complex event forecasting This is an amended version of Deliverable D64 taking into account the full final user evaluation
Maritime Use Case: Requirements, Scenario Definitions and Initial Evaluation ReportThis deliverable contains the final requirements and the scenario definitions for the maritime use case. It also includes the initial evaluation report for the Maritime use case, including the results of INFORE prototype on the available data streams.
Life Sciences Use Case: Requirements, Scenario Definitions and Initial Evaluation ReportFinal description of the cellular model, including training and testing data, set of applicable computational techniques, alternative models of cell signaling and cell cycle and specific HPC implementation. The deliverable also contains an initial evaluation report, including the results of INFORE prototype on the available data streams.
Initial Agent-Based ModelInitial description of the agent based model, including internal parameters and HPC implementation.
Amended System Prototype and Design of Software StacksThis deliverable is an amended version of Deliverable D43 taking into account the final user evaluation Tbe deliverable will also include a link to the code of the INFORE prototype
Quality Assurance PlanQuality assurance plan, which will in particular highlight potential risks and associated contingency plans.
Final Agent-Based ModelDescription of the agent based model including internal parameters and HPC implementation
Operator Cost Estimation, Workflow Optimization and Runtime Adaptation TechnologyOur updated algorithms for efficient and accurate estimation of executing operators at different available Big Data and HPC platforms and also for optimizing Big Data workflows over heterogeneous platforms We also describe our tools and techniques for runtime adaptation of the processing workflows
Operator Cost Estimation and Workflow Optimization Technology V1The initial version of our algorithms for efficient and accurate estimation of executing operators at different available Big Data and HPC platforms, as well as for optimizing Big Data workflows over such heterogeneous platforms.
Interactive Learning and Complex Event Forecasting Technology V1The initial set of tools and techniques for large-scale, distributed, interactive learning and for complex event forecasting.
Final Operator Cost Estimation, Workflow Optimization and Runtime Adaptation TechnologyOur final algorithms for efficient and accurate estimation of executing operators at different available Big Data and HPC platforms for optimizing Big Data workflows over heterogeneous platforms and for runtime adaptation of the processing workflows This deliverable is an amended version of D52 taking into account the full final user evaluation
Financial Use Case: Requirements, Scenario Definitions and Initial Evaluation ReportThis deliverable contains the final financial stakeholders requirements, and scenario definitions for this use-case. It also includes the initial evaluation report for the Financial use case, including the results of INFORE prototype on the available data streams.
Data Synopses Generator V1This deliverable provides the initial version of the engine for the generation of data synopses from distributed data streams.
Maritime Use Case: Final Evaluation ReportFinal evaluation report including the results of INFORE prototype on the available maritime data streams
Project workshopsProjectrelated workshops
This deliverable includes the second version of the data management plan.
Data Management Plan V3This deliverable includes the final data management plan
Data Management Plan V1This deliverable includes the first version of the data management plan.
This deliverable contains a fact sheet providing an overview of the project, following the EC standards and template, the project presentation and the project website to comprise the main dissemination and exploitation channel for promoting and communicating the project and relevant activities and achievements.
Publications
Author(s):
Montagud, Arnau; Béal, Jonas; Tobalina, Luis; Traynard, Pauline; Subramanian, Vigneshwari; Valencia, Alfonso
Published in:
Computational and Systems Biology, Issue 11, 2022, Page(s) e72626, ISSN 2050-084X
Publisher:
eLife Sciences Publications
DOI:
10.7554/elife.72626.sa0
Author(s):
Miguel Ponce-de-Leon; Javier del Valle; José M. Fernández; Marc Bernardo; Davide Cirillo; Jon Sánchez-Valle; Matthew Smith; Salvador Capella-Gutierrez; Tania Gullón; Alfonso Valencia
Published in:
Scientific Data, Issue 8, 2021, ISSN 2052-4463
Publisher:
Springer Nature
DOI:
10.1038/s41597-021-01093-5
Author(s):
Andrea Vandelli; Andrea Vandelli; Michele Monti; Michele Monti; Edoardo Milanetti; Edoardo Milanetti; Alexandros Armaos; Alexandros Armaos; Jakob Rupert; Jakob Rupert; Elsa Zacco; Elias Bechara; Elias Bechara; Riccardo Delli Ponti; Gian Gaetano Tartaglia
Published in:
Nucleic Acids Research, Issue 10, 2020, ISSN 0305-1048
Publisher:
Oxford University Press
DOI:
10.1101/2020.03.28.013789
Author(s):
Riccardo Delli Ponti; Alexandros Armaos; Andrea Vandelli; Gian Gaetano Tartaglia
Published in:
Bioinformatics, Issue 36, 2020, Page(s) 940–941, ISSN 1367-4803
Publisher:
Oxford University Press
DOI:
10.1093/bioinformatics/btz666
Author(s):
Elias Alevizos; Elias Alevizos; Alexander Artikis; Alexander Artikis; Georgios Paliouras
Published in:
The VLDB ournal, Issue 31, 2022, Page(s) 157-180, ISSN 1066-8888
Publisher:
Springer Verlag
DOI:
10.1007/s00778-021-00698-x
Author(s):
Nieves Lorenzo Gotor; Alexandros Armaos; Alexandros Armaos; Giulia Calloni; Marc Torrent Burgas; R. Martin Vabulas; R. Martin Vabulas; Natalia Sanchez de Groot; Gian Gaetano Tartaglia
Published in:
Nucleic Acids Research, Issue 11, 2020, ISSN 0305-1048
Publisher:
Oxford University Press
DOI:
10.1093/nar/gkaa681
Author(s):
Arnau Montagud; Jonas Béal; Luis Tobalina; Pauline Traynard; Vigneshwari Subramanian; Bence Szalai; Róbert Alföldi; László Puskás; Alfonso Valencia; Emmanuel Barillot; Julio Saez-Rodriguez; Laurence Calzone
Published in:
eLife, 2022, ISSN 2050-084X
Publisher:
eLife Sciences Publications
DOI:
10.7554/eLife.72626
Author(s):
Enrico Santus; Nicola Marino; Davide Cirillo; Emmanuele Chersoni; Arnau Montagud; Antonella Santuccione Chadha; Alfonso Valencia; Kevin S. Hughes; Charlotta Lindvall
Published in:
Journal of Medical Internet Research, Issue 3, 2021, ISSN 1438-8871
Publisher:
Journal of medical Internet Research
DOI:
10.2196/22453
Author(s):
Andrea Cerase; Gian Gaetano Tartaglia
Published in:
Open Biology, Issue 10, 2020, ISSN 2046-2441
Publisher:
Royal Society Publishing
DOI:
10.1098/rsob.200126
Author(s):
Arnau Montagud; Miguel Ponce-de-Leon; Alfonso Valencia; Alfonso Valencia
Published in:
Current Opinion in Systems Biology, Issue 28, 2021, ISSN 2452-3100
Publisher:
Elsevier
DOI:
10.1016/j.coisb.2021.100385
Author(s):
Cerase, Andrea; Tartaglia, Gian Gaetano
Published in:
Open Biology, 2020, ISSN 2046-2441
Publisher:
Royal Society Publishing
DOI:
10.6084/m9.figshare.12916528.v1
Author(s):
Ioannis Flouris, Nikos Giatrakos, Antonios Deligiannakis, Minos Garofalakis
Published in:
Information Systems, Issue 88, 2020, Page(s) 101442, ISSN 0306-4379
Publisher:
Elsevier Science & Technology
DOI:
10.1016/j.is.2019.101442
Author(s):
Miguel Ponce-de-León, Iñigo Apaolaza, Alfonso Valencia, Francisco J Planes
Published in:
Bioinformatics, Issue 36/6, 2019, Page(s) 1986-1988, ISSN 1367-4803
Publisher:
Oxford University Press
DOI:
10.1093/bioinformatics/btz832
Author(s):
Nikos Giatrakos, Elias Alevizos, Alexander Artikis, Antonios Deligiannakis, Minos Garofalakis
Published in:
The VLDB Journal, Issue 29/1, 2020, Page(s) 313-352, ISSN 1066-8888
Publisher:
Springer Verlag
DOI:
10.1007/s00778-019-00557-w
Author(s):
Nikos Giatrakos, Miguel Ponce De Leon, Gian Gaetano Tartaglia, Alfonso Valencia, Dimitrios Zissis, Nikos Katzouris, Antonios Deligiannakis, Alexander Artikis, Minos Garofalakis, George Paliouras, Holger Arndt, Raffaele Grasso, Ralf Klinkenberg
Published in:
IEEE Technology and Society Magazine, Issue 38/2, 2019, Page(s) 54-61, ISSN 0278-0097
Publisher:
Institute of Electrical and Electronics Engineers
DOI:
10.1109/MTS.2019.2913071
Author(s):
Artikis, Alexander; Makris, Evangelos; Paliouras, Georgios
Published in:
Annals of Mathematics and Artificial Intelligence, Issue 89, 2021, Page(s) 29-52, ISSN 1012-2443
Publisher:
Kluwer Academic Publishers
DOI:
10.1007/s10472-019-09664-4
Author(s):
Andrea Vandelli; Fernando Cid Samper; Marc Torrent Burgas; Natalia Sanchez de Groot; Gian Gaetano Tartaglia
Published in:
Journal of Molecular Biology, Issue 167159, 2022, ISSN 0022-2836
Publisher:
Academic Press
DOI:
10.1016/j.jmb.2021.167159
Author(s):
Marek Ostaszewski; Anna Niarakis; Anna Niarakis; Alexander Mazein; Inna Kuperstein; Inna Kuperstein; Robert Phair; Aurelio Orta-Resendiz; Vidisha Singh; Sara Sadat Aghamiri; Marcio Luis Acencio; Enrico Glaab; Andreas Ruepp; Gisela Fobo; Corinna Montrone; Barbara Brauner; Goar Frishman; Luis Cristobal Monraz Gomez; Luis Cristobal Monraz Gomez; Julia Somers; Matti Hoch; Shailendra K. Gupta; Julia Sc
Published in:
"Molecular Systems Biology, EMBO Press, 2021, 17 (10), pp.e10387. ⟨10.15252/msb.202110387⟩", Issue 4, 2021, ISSN 1744-4292
Publisher:
Nature Publishing Group
DOI:
10.15252/msb.202110851
Author(s):
Ponce-de-Leon, Miguel; Montagud, Arnau; Akasiadis, Charilaos; Schreiber, Janina; Ntiniakou, Thaleia; Valencia, Alfonso
Published in:
Frontiers in Moleculat Biosciences, Issue 06 April 2022, 2022, ISSN 2296-889X
Publisher:
Frontiers Media S.A.
DOI:
10.3389/fmolb.2022.836794
Author(s):
Manolis Pitsikalis, Alexander Artikis, Richard Dreo, Cyril Ray, Elena Camossi, Anne-Laure Jousselme
Published in:
Proceedings of the 13th ACM International Conference on Distributed and Event-based Systems, 2019, Page(s) 163-174, ISBN 9781450367943
Publisher:
ACM
DOI:
10.1145/3328905.3329762
Author(s):
Camossi, Elena
Published in:
ISWC (Demos/Industry), Issue 2721, 2020
Publisher:
http://ceur-ws.org/
DOI:
10.5281/zenodo.4692487
Author(s):
Ralf Klinkenberg
Published in:
DEBS, Issue 28 June 2021, 2021
Publisher:
ACM
DOI:
10.1145/3465480.3468676
Author(s):
Nikos Katzouris; Alexander Artikis
Published in:
KR, Issue 1, 2020, Page(s) 790–799, ISBN 978-0-9992411-7-2
Publisher:
IJCAI Organization
DOI:
10.5281/zenodo.3929476
Author(s):
Mantenoglou, Periklis; Pitsikalis, Manolis; Artikis, Alexander
Published in:
KR, Issue 1, 2022
Publisher:
https://kr.org/
DOI:
10.5281/zenodo.6538785
Author(s):
Nikos Giatrakos, David Arnu, Theodoros Bitsakis, Antonios Deligiannakis, Minos Garofalakis, Ralf Klinkenberg, Aris Konidaris, Antonis Kontaxakis, Yannis Kotidis, Vasilis Samoladas, Alkis Simitsis, George Stamatakis, Fabian Temme, Mate Torok, Edwin Yaqub, Arnau Montagud, Miguel Ponce de León, Holger Arndt, Stefan Burkard
Published in:
CIKM, Issue 19 October 2020, 2020
Publisher:
ACM
DOI:
10.1145/3340531.3417435
Author(s):
Ioannis Kontopoulos; Konstantinos Chatzikokolakis; Konstantinos Tserpes; Dimitris Zissis
Published in:
DEBS, Issue 15 July 2020, 2020
Publisher:
ACM
DOI:
10.1145/3401025.3401763
Author(s):
Antonis Kontaxakis; Nikos Giatrakos; Antonios Deligiannakis
Published in:
CIKM, Issue 19 October 2020, 2020
Publisher:
ACM
DOI:
10.1145/3340531.3412154
Author(s):
Antonios Kontaxakis; Antonios Deligiannakis; Holger Arndt; Stefan Burkard; Claus-Peter Kettner; Elke Pelikan; Kathleen Noack
Published in:
DEBS, Issue 28 June 2021, 2021
Publisher:
ACM
DOI:
10.1145/3465480.3467842
Author(s):
Alexandros Troupiotis-Kapeliaris; Konstantinos Chatzikokolakis; Dimitris Zissis; Elias Alevizos
Published in:
MDM, Issue 30 June-3 July 2020, 2020
Publisher:
IEEE
DOI:
10.5281/zenodo.3886343
Author(s):
Nikos Giatrakos; Eleni Kougioumtzi; Antonios Kontaxakis; Antonios Deligiannakis; Yannis Kotidis
Published in:
CIKM, Issue 17, 2021
Publisher:
ACM
DOI:
10.1145/3459637.3482094
Author(s):
Konstantina Bereta; Dimitris Zissis; Raffaele Grasso
Published in:
IEEE Oceans, Issue 5-30 Oct. 2020, 2020
Publisher:
IEEE
DOI:
10.5281/zenodo.4074826
Author(s):
Efthimis Tsilionis, Alexander Artikis, Georgios Paliouras
Published in:
Proceedings of the 13th ACM International Conference on Distributed and Event-based Systems, 2019, Page(s) 79-90, ISBN 9781450367943
Publisher:
ACM
DOI:
10.1145/3328905.3329504
Author(s):
Mantenoglou, Periklis; Artikis, Alexander; Paliouras, Georgios
Published in:
24th European Conference on Artificial Intelligence (ECAI), Issue 1, 2020
Publisher:
IOS Press
DOI:
10.5281/zenodo.3826462
Author(s):
Vasilis Samoladas; Minos Garofalakis
Published in:
22nd International Conference on Extending Database Technology (EDBT), 2019
Publisher:
OpenProceedings.org
DOI:
10.5281/zenodo.2579106
Author(s):
Troupiotis-Kapeliaris, Alexandros; Chatzikokolakis, Konstantinos; Zissis, Dimitris; Alevizos, Elias
Published in:
MBDW 2020: 2nd Maritime Big Data Workshop, Issue 2, 2020
Publisher:
IEEE Computer Society
DOI:
10.5281/zenodo.3886344
Author(s):
Nikos Giatrakos, Alexander Artikis, Antonios Deligiannakis, Minos Garofalakis
Published in:
Proceedings of the 13th ACM International Conference on Distributed and Event-based Systems, 2019, Page(s) 175-186, ISBN 9781450367943
Publisher:
ACM
DOI:
10.1145/3328905.3329763
Author(s):
Fikioris, Giannis; Patroumpas, Kostas; Artikis, Alexander
Published in:
2nd Maritime Big Data Workshop (MBDW 2020), Issue 1, 2020
Publisher:
IEEE Computer Society
DOI:
10.5281/zenodo.3886336
Author(s):
Katzouris, Nikos; Artikis, Alexander
Published in:
17th International Conference on Principles of Knowledge Representation and Reasoning, 2020
Publisher:
IJCAI Inc.
DOI:
10.5281/zenodo.3929477
Author(s):
Konstantina Bereta; Raffaele Grasso; Dimitris Zissis
Published in:
IGARSS, Issue 1, 2020, Page(s) 2276-2279, ISBN 978-1-7281-6374-1
Publisher:
IEEE
DOI:
10.5281/zenodo.4074814
Author(s):
Fikioris, Giannis; Patroumpas, Kostas; Artikis, Alexander; Paliouras, Georgios; Pitsikalis, Manolis
Published in:
Issue 1, 2020
Publisher:
ACM
DOI:
10.5281/zenodo.3999130
Author(s):
George Stamatakis, Antonios Kontaxakis, Alkis Simitsis, Nikos Giatrakos, Antonios Deligiannakis
Published in:
EDBT, 2022
Publisher:
openproceedings.org
DOI:
10.48786/edbt.2022.50
Author(s):
CAMOSSI, Elena; de ROSA, Francesca
Published in:
JOWO, Issue 2708, 2020
Publisher:
http://ceur-ws.org
DOI:
10.5281/zenodo.4692497
Author(s):
Project consortium members
Published in:
Issue 3, 2019
Publisher:
INFORE Project
DOI:
10.5281/zenodo.4034077
Author(s):
Project Consortium Members
Published in:
Issue 3, 2020
Publisher:
INFORE Project
DOI:
10.5281/zenodo.4034037
Author(s):
Project Consortium Members
Published in:
Issue 1, 2020, Page(s) 1-62
Publisher:
INFORE Project
DOI:
10.5281/zenodo.4034063
Author(s):
Project consortium members
Published in:
Issue 4, 2019
Publisher:
INFORE Project
DOI:
10.5281/zenodo.4034056
Author(s):
Project Consortium Members
Published in:
Issue 2, 2019
Publisher:
INFORE Project
DOI:
10.5281/zenodo.4034013
Author(s):
Project consortium members
Published in:
Issue 6, 2019
Publisher:
INFORE Project
DOI:
10.5281/zenodo.4034116
Author(s):
Project consortium members
Published in:
Issue 6, 2019
Publisher:
INFORE Project
DOI:
10.5281/zenodo.4034148
Author(s):
Noël, Vincent; Carbonell, Jose; Ponce de Leon, Miguel; Soliman, Sylvain; Niarakis, Anna; Calzone, Laurence; Barillot, Emmanuel; Valencia, Alfonso; Montagud, Arnau
Published in:
Disease Map Community Meeting 2020, Issue 5, 2020
Publisher:
https://disease-maps.org/
DOI:
10.5281/zenodo.4266718
Author(s):
Project Consortium Members
Published in:
Issue 1, 2019, Page(s) 1-38
Publisher:
INFORE Project
DOI:
10.5281/zenodo.4034092
Author(s):
Project consortium members
Published in:
Issue 1, 2020, Page(s) 1-75
Publisher:
INFORE Project
DOI:
10.5281/zenodo.4034087
Author(s):
Project Consortium Members
Published in:
Issue 6, 2021
Publisher:
INFORE Project
DOI:
10.5281/zenodo.4034129
Author(s):
Akasiadis, Charilaos; Ponce-de-Leon, Miguel; Montagud, Arnau; Michelioudakis, Evangelos; Atsidakou, Alexia; Alevizos, Elias; Artikis, Alexander; Valencia, Alfonso; Paliouras, Georgios
Published in:
Issue 3, 2021
Publisher:
arXiV
Author(s):
Alberto Ferrari; Enrico Santus; Davide Cirillo; Miguel Ponce-de-Leon; Nicola Marino; Maria Teresa Ferretti; Antonella Santuccione Chadha; Nikolaos Mavridis; Alfonso Valencia
Published in:
Issue 1, 2020
Publisher:
medRxiv
DOI:
10.1101/2020.05.14.20101675
Author(s):
Antonis Kontaxakis; Nikos Giatrakos; Antonios Deligiannakis
Published in:
Issue 2, 2020
Publisher:
arXiv.org
DOI:
10.5281/zenodo.3849978
Author(s):
Pitsikalis, Manolis; Artikis, Alexander; Dreo, Richard; Ray, Cyril; Camossi, Elena; Jousselme, Anne-Laure
Published in:
Issue 2, 2019
Publisher:
arXiv.org
Author(s):
Project consortium members
Published in:
Issue 3, 2020
Publisher:
INFORE Project
DOI:
10.5281/zenodo.4249006
Author(s):
Project consortium members
Published in:
Issue 4, 2020
Publisher:
INFORE Project
DOI:
10.5281/zenodo.4034099
Author(s):
Project Consortium Members
Published in:
Issue 8, 2019
Publisher:
INFORE Project
DOI:
10.5281/zenodo.4034141
Author(s):
Project Consortium Members
Published in:
Issue 5, 2020
Publisher:
INFORE Project
DOI:
10.5281/zenodo.4034109
Author(s):
Project Consortium Members
Published in:
Issue 2, 2020, Page(s) 1-34
Publisher:
INFORE Project
DOI:
10.5281/zenodo.4034023
Author(s):
Project consortium members
Published in:
Issue 2, 2019, Page(s) 1-25
Publisher:
INFORE Project
DOI:
10.5281/zenodo.4034136
Author(s):
Project Consortium Members
Published in:
Issue 6, 2020
Publisher:
INFORE Project
DOI:
10.5281/zenodo.4034151
Author(s):
Project Consortium Members
Published in:
Issue 3, 2019
Publisher:
INFORE Project
DOI:
10.5281/zenodo.4034145
Author(s):
Giatrakos, Nikos; Deligiannakis, Antonios; Bereta, Konstantina; Vodas, Marios; Zissis, Dimitris; Alevizos, Elias; Akasiadis, Charilaos; Artikis, Alexander
Published in:
Technologies and Applications for Big Data Value, Issue 01 July 2021, 2022, Page(s) 497-518, ISBN 978-3-030-78307-5
Publisher:
Springer, Cham
DOI:
10.1007/978-3-030-78307-5_22
Author(s):
Gaurav Saxena; Miguel Ponce de Leon; Arnau Montagud; David Vicente Dorca; Alfonso Valencia; Alfonso Valencia
Published in:
CMSB, Issue 12881, 2021, ISBN 978-3-030-85633-5
Publisher:
Springer, Cham
DOI:
10.1007/978-3-030-85633-5_18
Author(s):
Antonis Kontaxakis
Published in:
Issue 3, 2020
Publisher:
Institutional Repository, Technical University of Crete
DOI:
10.26233/heallink.tuc.85602
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