Illuminating Earth’s microbial diversity and origins from metagenomes with deep learning

Project Information

ERMADA

Grant agreement ID: 838018

DOI

10.3030/838018

Project closed

EC signature date 1 April 2019

Start date 1 August 2019

End date 21 March 2025

Funded under

• EXCELLENT SCIENCE - Marie Skłodowska-Curie Actions

Total cost

€ 247 628,16

EU contribution

€ 247 628,16

Coordinated by

EREVNITIKO KENTRO VIOIATRIKON EPISTIMON ALEXANDROS FLEMINGK
Greece

CORDIS provides links to public deliverables and publications of HORIZON projects.

Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Publications

Non-peer reviewed articles (1)

Towards a three-dimensional mapping of virus-host proximal protein interactions

Author(s): Yorgos Sofianatos, Étienne Coyaud, Caroline Demeret
Published in: The Project Repository Journal, Issue 13, 2022, Page(s) 14-17, ISSN 2632-4067
Publisher: European Dissemination Media Agency Limited
DOI: 10.54050/prj1318790

Peer reviewed articles (2)

Multimodal SARS-CoV-2 interactome sketches the virus-host spatial organization

Author(s): Guillaume Dugied, Estelle MN Laurent, Mikaël Attia, Jean-Pascal Gimeno, Kamel Bachiri, Payman Samavarchi-Tehrani, Flora Donati, Yannis Rahou, Sandie Munier, Faustine Amara, Mélanie Dos Santos, Nicolas Soler, Stevenn Volant, Natalia Pietrosemoli, Anne-Claude Gingras, Georgios A. Pavlopoulos, Sylvie van der Werf, Pascal Falter-Braun, Patrick Aloy, Yves Jacob, Anastassia Komarova, Yorgos Sofianatos
Published in: Communications Biology, Issue 8, 2025, ISSN 2399-3642
Publisher: Springer Science and Business Media LLC
DOI: 10.1038/s42003-025-07933-z

NMPFamsDB: a database of novel protein families from microbial metagenomes and metatranscriptomes

Author(s): Fotis A Baltoumas, Evangelos Karatzas, Sirui Liu, Sergey Ovchinnikov, Yorgos Sofianatos, I-Min Chen, Nikos C Kyrpides, Georgios A Pavlopoulos
Published in: Nucleic Acids Research, Issue 52, 2024, Page(s) D502-D512, ISSN 0305-1048
Publisher: Oxford University Press
DOI: 10.1093/nar/gkad800