Terrestrialization: Stress Signalling Dynamics in the Algal Progenitors of Land Plants

Publications

Submergence of the filamentous Zygnematophyceae Mougeotia induces differential gene expression patterns associated with core metabolism and photosynthesis

Author(s): Janine M.R. Fürst-Jansen; Sophie de Vries; Maike Lorenz; Klaus von Schwartzenberg; John M. Archibald; Jan de Vries
Published in: Protoplasma, 2021, ISSN 0033-183X
Publisher: Springer Verlag
DOI: 10.1007/s00709-021-01730-1

Divergent responses in desiccation experiments in two ecophysiologically different Zygnematophyceae

Author(s): Tim P. Rieseberg; Armin Dadras; Luisa I. N. Bergschmidt; Maaike J. Bierenbroodspot; Janine M. R. Fürst‐Jansen; Iker Irisarri; Sophie de Vries; Tatyana Darienko; Jan de Vries
Published in: Crossref, Issue 2, 2023, ISSN 0031-9317
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/ppl.14056

Divergent evolution of the alcohol‐forming pathway of wax biosynthesis among bryophytes

Author(s): Alisa Keyl; Cornelia Herrfurth; Garima Pandey; Ryeo Jin Kim; Lina Helwig; Tegan M. Haslam; Sophie de Vries; Jan de Vries; Nora Gutsche; Sabine Zachgo; Mi Chung Suh; Ljerka Kunst; Ivo Feussner
Published in: Crossref, Issue 13, 2024, ISSN 0028-646X
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/nph.19687

Ties between Stress and Lipid Droplets Pre-date Seeds

Author(s): Jan de Vries, Till Ischebeck
Published in: Trends in Plant Science, 2020, ISSN 1360-1385
Publisher: Elsevier BV
DOI: 10.1016/j.tplants.2020.07.017

Evolutionary genomic insights into cyanobacterial symbioses in plants

Author(s): Jan De Vries; Sophie De Vries
Published in: Crossref, Issue 1, 2022, ISSN 2632-8828
Publisher: Cambridge University Press
DOI: 10.1017/qpb.2022.3

Underwater CAM photosynthesis elucidated by Isoetes genome

Author(s): David Wickell, Li-Yaung Kuo, Hsiao-Pei Yang, Amra Dhabalia Ashok, Iker Irisarri, Armin Dadras, Sophie de Vries, Jan de Vries, Yao-Moan Huang, Zheng Li, Michael S. Barker, Nolan T. Hartwick, Todd P. Michael, Fay-Wei Li
Published in: Nature Communications, Issue 12/1, 2021, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-021-26644-7

Environmental gradients reveal stress hubs pre-dating plant terrestrialization

Author(s): Armin Dadras; Janine M. R. Fürst-Jansen; Tatyana Darienko; Denis Krone; Patricia Scholz; Siqi Sun; Cornelia Herrfurth; Tim P. Rieseberg; Iker Irisarri; Rasmus Steinkamp; Maike Hansen; Henrik Buschmann; Oliver Valerius; Gerhard H. Braus; Ute Hoecker; Ivo Feussner; Marek Mutwil; Till Ischebeck; Sophie de Vries; Maike Lorenz; Jan de Vries
Published in: Crossref, Issue 5, 2023, ISSN 2055-0278
Publisher: Nature Portfolio
DOI: 10.1038/s41477-023-01491-0

Accessible versatility underpins the deep evolution of plant specialized metabolism

Author(s): Armin Dadras; Tim P. Rieseberg; Jaccoline M. S. Zegers; Janine M. R. Fürst-Jansen; Iker Irisarri; Jan de Vries; Sophie de Vries
Published in: Crossref, Issue 7, 2023, ISSN 1568-7767
Publisher: Kluwer Academic Publishers
DOI: 10.1007/s11101-023-09863-2

A phylogenomically informed five-order system for the closest relatives of land plants

Author(s): Sebastian Hess, Shelby K Williams, Anna Busch, Iker Irisarri, Charles F Delwiche, Sophie de Vries, Tatyana Darienko, Andrew J Roger, John M Archibald, Henri Buschmann, Klaus von Schwartzenberg, Jan de Vries
Published in: Current Biology, 2022, ISSN 0960-9822
Publisher: Cell Press
DOI: 10.1016/j.cub.2022.08.022

The evolution of the phenylpropanoid pathway entailed pronounced radiations and divergences of enzyme families

Author(s): Sophie de Vries, Janine MR Fürst‐Jansen, Iker Irisarri, Amra Dhabalia Ashok, Till Ischebeck, Kirstin Feussner, Ilka N Abreu, Maike Petersen, Ivo Feussner, Jan de Vries
Published in: The Plant Journal, 2021, ISSN 0960-7412
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/tpj.15387

Proteome plasticity during <i>Physcomitrium patens</i> spore germination – from the desiccated phase to heterotrophic growth and reconstitution of photoautotrophy

Author(s): Lea Hembach; Philipp W. Niemeyer; Kerstin Schmitt; Jaccoline M. S. Zegers; Patricia Scholz; Dennis Brandt; Janis J. Dabisch; Oliver Valerius; Gerhard H. Braus; Markus Schwarzländer; Jan de Vries; Stefan A. Rensing; Till Ischebeck
Published in: "Plant Journal, 2023, 117 (5), pp.1466-1486. ⟨10.1111/tpj.16574⟩", Issue 1, 2024, ISSN 0960-7412
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/tpj.16574

LDIP Cooperates with SEIPIN and LDAP to Facilitate Lipid Droplet Biogenesis in Arabidopsis

Author(s): Michal Pyc, Satinder K Gidda, Damien Seay, Nicolas Esnay, Franziska K Kretzschmar, Yingqi Cai, Nathan M Doner, Michael S Greer, J Joe Hull, Denis Coulon, Claire Bréhélin, Olga Yurchenko, Jan de Vries, Oliver Valerius, Gerhard H Braus, Till Ischebeck, Kent D Chapman, John M Dyer, Robert T Mullen
Published in: The Plant Cell, 2021, ISSN 1532-298X
Publisher: Oxford University Press
DOI: 10.1093/plcell/koab179

Unexpected cryptic species among streptophyte algae most distant to land plants

Author(s): Iker Irisarri, Tatyana Darienko, Thomas Pröschold, Janine M. R. Fürst-Jansen, Mahwash Jamy, Jan de Vries
Published in: Proceedings of the Royal Society B: Biological Sciences, Issue 288/1963, 2021, ISSN 0962-8452
Publisher: Royal Society of London
DOI: 10.1098/rspb.2021.2168

Plant genome sequence assembly in the era of long reads: Progress, challenges and future directions

Author(s): Boas Pucker, Iker Irisarri, Jan de Vries, Bo Xu
Published in: Quantitative Plant Biology, 2022, ISSN 2632-8828
Publisher: Cambridge University Press
DOI: 10.1017/qpb.2021.18

Punctuated ancestral gene gains in streptophyte evolution

Author(s): Iker Irisarri, Jan de Vries
Published in: Molecular Plant, 2022, ISSN 1674-2052
Publisher: Oxford University Press
DOI: 10.1016/j.molp.2022.03.010

A Global Survey of Carbohydrate Esterase Families 1 and 10 in Oomycetes

Author(s): Sophie de Vries, Jan de Vries
Published in: Frontiers in Genetics, Issue 11, 2020, ISSN 1664-8021
Publisher: Frontiers Media
DOI: 10.3389/fgene.2020.00756

An ancient route towards salicylic acid and its implications for the perpetual <i>Trichormus–Azolla</i> symbiosis

Author(s): Sophie de Vries; Cornelia Herrfurth; Fay‐Wei Li; Ivo Feussner; Jan de Vries
Published in: Crossref, Issue 6, 2023, ISSN 0140-7791
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/pce.14659

The genome of the venomous snail Lautoconus ventricosus sheds light on the origin of conotoxin diversity

Author(s): José Ramón Pardos-Blas, Iker Irisarri, Samuel Abalde, Carlos M L Afonso, Manuel J Tenorio, Rafael Zardoya
Published in: GigaScience, Issue 10/5, 2021, ISSN 2047-217X
Publisher: Oxford University Press
DOI: 10.1093/gigascience/giab037

A seed‐like proteome in oil‐rich tubers

Author(s): Philipp William Niemeyer; Iker Irisarri; Patricia Scholz; Kerstin Schmitt; Oliver Valerius; Gerhard H. Braus; Cornelia Herrfurth; Ivo Feussner; Shrikant Sharma; Anders S. Carlsson; Jan de Vries; Per Hofvander; Till Ischebeck
Published in: Crossref, Issue 1, 2022, ISSN 1365-313X
Publisher: John Wiley & Sons Ltd
DOI: 10.1111/tpj.15964

A ligand-independent origin of abscisic acid perception

Author(s): Yufei Sun, Ben Harpazi, Akila Wijerathna-Yapa, Ebe Merilo, Jan de Vries, Daphna Michaeli, Maayan Gal, Andrew C. Cuming, Hannes Kollist, Assaf Mosquna
Published in: Proceedings of the National Academy of Sciences, Issue 116/49, 2019, Page(s) 24892-24899, ISSN 0027-8424
Publisher: National Academy of Sciences
DOI: 10.1073/pnas.1914480116

Evo-physio: on stress responses and the earliest land plants

Author(s): Janine M R Fürst-Jansen, Sophie de Vries, Jan de Vries
Published in: Journal of Experimental Botany, 2020, ISSN 0022-0957
Publisher: Oxford University Press
DOI: 10.1093/jxb/eraa007

Anthoceros genomes illuminate the origin of land plants and the unique biology of hornworts

Author(s): Fay-Wei Li, Tomoaki Nishiyama, Manuel Waller, Eftychios Frangedakis, Jean Keller, Zheng Li, Noe Fernandez-Pozo, Michael S. Barker, Tom Bennett, Miguel A. Blázquez, Shifeng Cheng, Andrew C. Cuming, Jan de Vries, Sophie de Vries, Pierre-Marc Delaux, Issa S. Diop, C. Jill Harrison, Duncan Hauser, Jorge Hernández-García, Alexander Kirbis, John C. Meeks, Isabel Monte, Sumanth K. Mutte, Anna Neubauer
Published in: Nature Plants, Issue 6/3, 2020, Page(s) 259-272, ISSN 2055-0278
Publisher: Springer Nature
DOI: 10.1038/s41477-020-0618-2

Heat stress response in the closest algal relatives of land plants reveals conserved stress signaling circuits

Author(s): Jan de Vries, Sophie de Vries, Bruce A. Curtis, Hong Zhou, Susanne Penny, Kirstin Feussner, Devanand M. Pinto, Michael Steinert, Alejandro Cohen, Klaus von Schwartzenberg, John M. Archibald
Published in: The Plant Journal, 2020, ISSN 0960-7412
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/tpj.14782

Gene gains paved the path to land

Author(s): Jan de Vries, Stefan A. Rensing
Published in: Nature Plants, Issue 6/1, 2020, Page(s) 7-8, ISSN 2055-0278
Publisher: Springer Nature
DOI: 10.1038/s41477-019-0579-5

Chloroplast ion homeostasis – what do we know and where should we go?

Author(s): Hans‐Henning Kunz; Ute Armbruster; Susanne Mühlbauer; Jan de Vries; Geoffry A. Davis
Published in: Crossref, Issue 1, 2024, ISSN 0028-646X
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/nph.19661

Fern cell walls and the evolution of arabinogalactan-proteins in streptophytes

Author(s): Mueller, Kim-Kristine; Pfeifer, Lukas; Schuldt, Lina; Szövényi, Péter; de Vries, Sophie; de Vries, Jan; Johnson, Kim L; Classen, Birgit
Published in: The Plant Journal, 114 (4), Issue 5, 2023, ISSN 0960-7412
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/tpj.16178

Crossroads in the evolution of plant specialized metabolism

Author(s): Tim P. Rieseberg, Armin Dadras, Janine M.R. Fürst-Jansen, Amra Dhabalia Ashok, Tatyana Darienko, Sophie de Vries, Iker Irisarri, Jan de Vries
Published in: Seminars in Cell & Developmental Biology, 2022, ISSN 1084-9521
Publisher: Academic Press
DOI: 10.1016/j.semcdb.2022.03.004

Two plastid POLLUX ion channel-like proteins are required for stress-triggered stromal Ca2+ release

Author(s): Carsten Völkner, Lorenz Josef Holzner, Philip M Day, Amra Dhabalia Ashok, Jan de Vries, Bettina Bölter, Hans-Henning Kunz
Published in: Plant Physiology, 2021, ISSN 1532-2548
Publisher: Oxford University Press
DOI: 10.1093/plphys/kiab424

Author(s): Amra Dhabalia Ashok; Jella N. Freitag; Iker Irisarri; Sophie de Vries; Jan de Vries
Published in: Crossref, Issue 4, 2024, ISSN 0031-9317
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/ppl.14244

Convergence of sphingolipid desaturation across over 500 million years of plant evolution

Author(s): Hanno Christoph Resemann, Cornelia Herrfurth, Kirstin Feussner, Ellen Hornung, Anna K. Ostendorf, Jasmin Gömann, Jennifer Mittag, Nico van Gessel, Jan de Vries, Jutta Ludwig-Müller, Jennifer Markham, Ralf Reski, Ivo Feussner
Published in: Nature Plants, 2020, ISSN 2055-0278
Publisher: Springer Nature Limited
DOI: 10.1038/s41477-020-00844-3

Comparative analyses of saprotrophy in Salisapilia sapeloensis and diverse plant pathogenic oomycetes reveal lifestyle-specific gene expression.

Author(s): Sophie de Vries; Claudio H. Slamovits; Jan de Vries; Jan de Vries; John M. Archibald
Published in: FEMS Microbiology Ecology, Issue 1, 2020, ISSN 0168-6496
Publisher: Blackwell
DOI: 10.1101/656496

Phylogenomic insights into the first multicellular streptophyte

Author(s): Maaike J. Bierenbroodspot; Tatyana Darienko; Sophie de Vries; Janine M.R. Fürst-Jansen; Henrik Buschmann; Thomas Pröschold; Iker Irisarri; Jan de Vries
Published in: Crossref, Issue 3, 2024, ISSN 0960-9822
Publisher: Cell Press
DOI: 10.1101/2023.11.01.564981

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