Modes of genome evolution during major metazoan transitions

Project Information

METASCALE

Grant agreement ID: 945026

DOI

10.3030/945026

EC signature date 15 October 2020

Start date 1 July 2021

End date 30 June 2026

Funded under

• EXCELLENT SCIENCE - European Research Council (ERC)

Total cost

€ 1 483 477,00

EU contribution

€ 1 483 477,00

Coordinated by

UNIVERSITAT WIEN
Austria

CORDIS provides links to public deliverables and publications of HORIZON projects.

Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Publications

Peer reviewed articles (9)

Gene modelling and annotation for the Hawaiian bobtail squid, Euprymna scolopes

Author(s): Rogers, T. F., Yalçın, G., Briseno, J., Vijayan, N., Nyholm, S. V. & Simakov, O.
Published in: Scientific Data, 2024, ISSN 2052-4463
Publisher: 2052-4463
DOI: 10.1038/s41597-023-02903-8

Robust 3D modelling reveals spatiosyntenic properties of animal genomes

Author(s): Clarence T, Robert NSM, Sarigoel F, Fu X, Bates P, Simakov O
Published in: iScience, 2023, ISSN 2589-0042
Publisher: Cell Press
DOI: 10.1016/j.isci.2023.106136

Chromosome-level genome of the three-spot damselfish, <i>Dascyllus trimaculatus</i>

Author(s): May B. Roberts; Darrin T. Schultz; Remy Gatins; Merly Escalona; Giacomo Bernardi
Published in: G3: Genes, Genomes, Genetics, vol 13, iss 4, Issue 4, 2022, ISSN 2160-1836
Publisher: Genetics Society of America
DOI: 10.1101/2022.08.16.504202

Deeply conserved synteny and the evolution of metazoan chromosomes

Author(s): Simakov O, Bredeson J, Berkoff K, Marletaz F, Mitros T, Schultz DT, O'Connell BL, Dear P, Martinez DE, Steele RE, Green RE, David CN, Rokhsar DS.
Published in: Science Advances, 2022, ISSN 2375-2548
Publisher: American Association for the Advancement of Science
DOI: 10.1126/sciadv.abi5884

A chromosome-level reference genome for the common octopus, Octopus vulgaris (Cuvier, 1797)

Author(s): Destanović, D., Schultz, D. T., Styfhals, R., Cruz, F., Gómez-Garrido, J., Gut, M., Gut, I., Fiorito, G., Simakov, O., Alioto, T. S., Ponte, G., Seuntjens, E.
Published in: G3, 2023, ISSN 2160-1836
Publisher: Genetics Society of America
DOI: 10.1093/g3journal/jkad220

Ancient gene linkages support ctenophores as sister to other animals

Author(s): Darrin T Schultz, Steven H D Haddock, Jessen V Bredeson, Richard E Green, Oleg Simakov, Daniel S Rokhsar
Published in: Nature, 2023, ISSN 1476-4687
Publisher: Nature
DOI: 10.1038/s41586-023-05936-6

Emergence of novel genomic regulatory regions associated with light-organ development in the bobtail squid

Author(s): Lisa Rouressol; John Briseno; Nidhi Vijayan; Grischa Y. Chen; Elena A. Ritschard; Gustavo Sanchez; Spencer V. Nyholm; Margaret J. McFall-Ngai; Oleg Simakov
Published in: iScience, Issue 4, 2023, ISSN 2589-0042
Publisher: Cell Press Elsevier Inc.
DOI: 10.1016/j.isci.2023.107091

Emerging questions on the mechanisms and dynamics of 3D genome evolution in spiralians

Author(s): Rogers, T. F., Simakov, O.
Published in: Briefungs in Functional Genomics, 2023, ISSN 2041-2649
Publisher: Oxford University Press
DOI: 10.1093/bfgp/elad043

The complete mitochondrial genome of <i>Dascyllus trimaculatus</i> (Rüppell, 1829)

Author(s): Juliana Limón; May B. Roberts; Darrin T. Schultz; Giacomo Bernardi
Published in: Mitochondrial DNA Part B, Issue 4, 2023, ISSN 2380-2359
Publisher: Taylor and Francis Online
DOI: 10.1080/23802359.2022.2161838