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A Personalised Living Cell Synthetic Computing Circuit for Sensing and Treating Neurodegenerative Disorders

Deliverables

Updated dissemination and exploitation plan period 2

Updated Plan for Dissemination Communication and Exploitation of Results

Initial dissemination and exploitation plan

Plan for Dissemination Communication and Exploitation of Results

Updated dissemination and exploitation plan period 1

Updated Plan for Dissemination Communication and Exploitation of Results

Repository for simulation code

Direct outcome of T25 reporting creation of an opensource repository where code for simulations will be maintained

Publications

Shaping the future of European epilepsy research: Final meeting report from EPICLUSTER

Author(s): David C. Henshall a, Alexis Arzimanoglou b, Stefanie Dedeurwaerdere c, Renzo Guerrini d, Sergiusz Jozwiak e, Merab Kokaia f, Holger Lerche g, Asla Pitkänen h, Philippe Ryvlin i, Michele Simonato j l, Sanjay M. Sisodiya k
Published in: Epilepsy Research, Issue Volume 189, January 2023, 107068, 2023, ISSN 0346-251X
Publisher: Pergamon Press Ltd.
DOI: 10.1016/j.eplepsyres.2022.107068

Sampling Cerebrospinal Fluid and Blood from Lateral Tail Vein in Rats During EEG Recordings

Author(s): Marie Soukupová, Annunziata Guarino, Laila Asth, Pietro Marino, Mario Barbieri, Michele Simonato, Silvia Zucchini
Published in: JoVE Journal Neuroscience, 2023, ISSN 1940-087X
Publisher: MYJoVE Corporation
DOI: 10.3791/65636

Shaping the future of European epilepsy research: Final meeting report from EPICLUSTER

Author(s): David C. Henshall a, Alexis Arzimanoglou b, Stefanie Dedeurwaerdere c, Renzo Guerrini d, Sergiusz Jozwiak e, Merab Kokaia f, Holger Lerche g, Asla Pitkänen h, Philippe Ryvlin i, Michele Simonato j l, Sanjay M. Sisodiya k
Published in: Epilepsy Research, Issue Volume 189, 107068, 2022
Publisher: Elsevier B.V.
DOI: 10.1016/j.eplepsyres.2022.107068

Nanopore long-read sequencing of circRNAs

Author(s): Karim Rahimi a b, Anne Færch Nielsen b c, Morten T. Venø d, Jørgen Kjems
Published in: Methods, Issue Volume 196, December 2021, 2021, Page(s) 23-29, ISSN 0000-0000
Publisher: Elsevier Inc.
DOI: 10.1016/j.ymeth.2021.09.010

tsRNAsearch: a pipeline for the identification of tRNA and ncRNA fragments from small RNA-sequencing data

Author(s): Paul D Donovan, Natalie M McHale, Morten T Venø, Jochen H M Prehn
Published in: Bioinformatics, Issue Volume 37, Issue 23, December 2021, 2021, Page(s) Pages 4424–4430, ISSN 1367-4811
Publisher: Oxford University Press
DOI: 10.1093/bioinformatics/btab515

A kainic acid-induced seizure model in human pluripotent stem cell-derived cortical neurons for studying the role of IL-6 in the functional activity

Author(s): Ropafadzo Mzezewa a, Johanna Lotila a, Heikki Kiiski b, Andrey Vinogradov a, Fikret Emre Kapucu a, Jukka Peltola c, Sanna Hagman a, Susanna Narkilahti
Published in: Stem Cell Research, Issue (2.02), 2022, ISSN 0000-0000
Publisher: Elsevier B.V.
DOI: 10.1016/j.scr.2022.102665

Nanopore sequencing of brain-derived full-length circRNAs reveals circRNA-specific exon usage, intron retention and microexons

Author(s): Karim Rahimi, Morten T. Venø, Daniel M. Dupont & Jørgen Kjems
Published in: Nature Communications (Nat Commun), Issue 12, Article number: 4825 (2021), 2021, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-021-24975-z

Cyclic Hypoxia Conditioning Alters the Content of Myoblast-Derived Extracellular Vesicles and Enhances Their Cell-Protective Functions

Author(s): Yan Yan, Tingting Gu, Stine Christensen, Junyi Su, Thomas Lassen, Marie Hjortbak, IJu Lo, Susanne Venø, Andrea Tóth, Ping Song, Morten Nielsen, Hans Bøtker, Blagoy Blagoev, Kim Drasbek, Jørgen Kjems.
Published in: Biomedicines, Issue 9(9), 1211, 2021, ISSN 2227-9059
Publisher: MDPI
DOI: 10.3390/biomedicines9091211

Distinct non-coding RNA cargo of extracellular vesicles from M1 and M2 human primary macrophages

Author(s): Paschalia Pantazi, Toby Clements, Morten Venø, Vikki M. Abrahams, Beth Holder
Published in: Journal of Extracellular Vesicles, Issue Volume 11, Issue 12, 2022, ISSN 2001-3078
Publisher: Wiley Periodicals, LLC on behalf of the International Society for Extracellular Vesicles.
DOI: 10.1002/jev2.12293

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