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Content archived on 2022-12-23

Building a comprehensive model of mammalian cell- cycle regulatory network in normal and pathological states to predict potential anticancer pharmacological agents for key target molecules.

Objective

The project is devoted to building a comprehensive model of mammalian cell-cycle regulatory network in normal and pathological states. This model will be used to make computer-aided predictions of potential anticancer pharmacological agents for key target molecules. The following main objectives will be achieved during realisation of this project.

We will create a database on cell cycle specific and related genes that will include available information on micro array gene expression data, data on gene transcription and translation regulation, proteomics data, comparative genomic data, SNP and other gene diversity data as well as related clinical data.
We will Develop models of the structure of genomic regulatory regions controlling gene expression of the most important genes involved in cell cycle regulation and predict new genes in genome involved in the cell cycle regulatory network.

We will build a computer model of the core regulatory network of mammalian cell cycle. Analyse the structure and dynamic properties of the cell-cycle model, identify possible stationary states, investigate parametric stability of network, bifurcation analysis, identify the most critical components and parameters that can move system from one stationary state to another.

We will modelling the structural and parametric changes in cell cycle regulatory networks during normal process of cell differentiation and the perturbations that are observed in different pathological situations for example deregulated cell proliferation. Identification of the components responsible for such perturbations and Identification of targets and of mechanisms how cell cycle perturbations can be minimized and/or how cancer cells can de directed into apoptosis will be done.

Finally, using the most modern methods of chemoinformatics we will search for pharmacological agents that can influence the potential target molecules revealed by the modelling. We will do modelling of the prolonged effects of the influence of the proposed pharmacological agents on dynamics of cell-cycle.

Integrating all knowledge collected and obtained on the previous steps into the most comprehensive knowledge databasebase on mammalian cell cycle regulatory network will be performed during realisation of this project.

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Programme(s)

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Topic(s)

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Call for proposal

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Funding Scheme

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Coordinator

BIOBASE GMBH
EU contribution
No data
Address
HALCHTERSCHE STRAßE, 33
WOLFENBÜTTEL
Germany

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Total cost

The total costs incurred by this organisation to participate in the project, including direct and indirect costs. This amount is a subset of the overall project budget.

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Participants (3)