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Microbial lipids: The three domain ‘lipid divide’ revisited

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Publications

Pheno- and Genotyping of Hopanoid Production in Acidobacteria

Author(s): Jaap S. Sinninghe Damsté, W. Irene C. Rijpstra, Svetlana N. Dedysh, Bärbel U. Foesel, Laura Villanueva
Published in: Frontiers in Microbiology, Issue 8, 2017, ISSN 1664-302X
DOI: 10.3389/fmicb.2017.00968

Lipids as paleomarkers to constrain the marine nitrogen cycle

Author(s): Darci Rush, Jaap S. Sinninghe Damsté
Published in: Environmental Microbiology, Issue 19/6, 2017, Page(s) 2119-2132, ISSN 1462-2912
DOI: 10.1111/1462-2920.13682

Natronobiforma cellulositropha gen. nov., sp. nov., a novel haloalkaliphilic member of the family Natrialbaceae (class Halobacteria) from hypersaline alkaline lakes

Author(s): Dimitry Y. Sorokin, Tatiana V. Khijniak, Nadezhda A. Kostrikina, Alexander G. Elcheninov, Stepan V. Toshchakov, Nicole J. Bale, Jaap S. Sinninghe Damsté, Ilya V. Kublanov
Published in: Systematic and Applied Microbiology, Issue 41/4, 2018, Page(s) 355-362, ISSN 0723-2020
DOI: 10.1016/j.syapm.2018.04.002

Benthic archaea as potential sources of tetraether membrane lipids in sediments across an oxygen minimum zone

Author(s): Marc A. Besseling, Ellen C. Hopmans, R. Christine Boschman, Jaap S. Sinninghe Damsté, Laura Villanueva
Published in: Biogeosciences, Issue 15/13, 2018, Page(s) 4047-4064, ISSN 1726-4189
DOI: 10.5194/bg-15-4047-2018

Metabolism and Occurrence of Methanogenic and Sulfate-Reducing Syntrophic Acetate Oxidizing Communities in Haloalkaline Environments

Author(s): Peer H. A. Timmers, Charlotte D. Vavourakis, Robbert Kleerebezem, Jaap S. Sinninghe Damsté, Gerard Muyzer, Alfons J. M. Stams, Dimity Y. Sorokin, Caroline M. Plugge
Published in: Frontiers in Microbiology, Issue 9, 2018, ISSN 1664-302X
DOI: 10.3389/fmicb.2018.03039

Redox-dependent niche differentiation provides evidence for multiple bacterial sources of glycerol tetraether lipids in lakes

Author(s): Yuki Weber, Jaap S. Sinninghe Damsté, Jakob Zopfi, Cindy De Jonge, Adrian Gilli, Carsten J. Schubert, Fabio Lepori, Moritz F. Lehmann, Helge Niemann
Published in: Proceedings of the National Academy of Sciences, Issue 115/43, 2018, Page(s) 10926-10931, ISSN 0027-8424
DOI: 10.1073/pnas.1805186115

Natronolimnobius sulfurireducens sp. nov. and Halalkaliarchaeum desulfuricum gen. nov., sp. nov., the first sulfur-respiring alkaliphilic haloarchaea from hypersaline alkaline lakes

Author(s): Dimitry Y. Sorokin, Mikhail Yakimov, Enzo Messina, Alexander Y. Merkel, Nicole J. Bale, Jaap S. Sinninghe Damsté
Published in: International Journal of Systematic and Evolutionary Microbiology, 2019, ISSN 1466-5026
DOI: 10.1099/ijsem.0.003506

Halococcoides cellulosivorans gen. nov., sp. nov., an extremely halophilic cellulose-utilizing haloarchaeon from hypersaline lakes

Author(s): Dimitry Y. Sorokin, Tatiana V. Khijniak, Alexander G. Elcheninov, Stepan V. Toshchakov, Nadezhda A. Kostrikina, Nicole J. Bale, Jaap S. Sinninghe Damsté, Ilya V. Kublanov
Published in: International Journal of Systematic and Evolutionary Microbiology, Issue 69/5, 2019, Page(s) 1327-1335, ISSN 1466-5026
DOI: 10.1099/ijsem.0.003312

New Insights Into the Polar Lipid Composition of Extremely Halo(alkali)philic Euryarchaea From Hypersaline Lakes

Author(s): Nicole J. Bale, Dimitry Y. Sorokin, Ellen C. Hopmans, Michel Koenen, W. Irene C. Rijpstra, Laura Villanueva, Hans Wienk, Jaap S. Sinninghe Damsté
Published in: Frontiers in Microbiology, Issue 10, 2019, ISSN 1664-302X
DOI: 10.3389/fmicb.2019.00377

Natrarchaeobius chitinivorans gen. nov., sp. nov., and Natrarchaeobius halalkaliphilus sp. nov., alkaliphilic, chitin-utilizing haloarchaea from hypersaline alkaline lakes

Author(s): Dimitry Y. Sorokin, Alexander G. Elcheninov, Stepan V. Toshchakov, Nicole J. Bale, Jaap S. Sinninghe Damsté, Tatiana V. Khijniak, Ilya V. Kublanov
Published in: Systematic and Applied Microbiology, Issue 42/3, 2019, Page(s) 309-318, ISSN 0723-2020
DOI: 10.1016/j.syapm.2019.01.001

Fatty Acid and Hopanoid Adaption to Cold in the Methanotroph Methylovulum psychrotolerans

Author(s): Nicole J. Bale, W. Irene C. Rijpstra, Diana X. Sahonero-Canavesi, Igor Y. Oshkin, Svetlana E. Belova, Svetlana N. Dedysh, Jaap S. Sinninghe Damsté
Published in: Frontiers in Microbiology, Issue 10, 2019, ISSN 1664-302X
DOI: 10.3389/fmicb.2019.00589

Biosynthesis of Long Chain Alkyl Diols and Long Chain Alkenols in Nannochloropsis spp. (Eustigmatophyceae)

Author(s): Sergio Balzano, Laura Villanueva, Marijke de Bar, Diana X Sahonero Canavesi, Caglar Yildiz, Julia C Engelmann, Eric Marechal, Josselin Lupette, Jaap S Sinninghe Damsté, Stefan Schouten
Published in: Plant and Cell Physiology, 2019, ISSN 0032-0781
DOI: 10.1093/pcp/pcz078

Depth-related differences in archaeal populations impact the isoprenoid tetraether lipid composition of the Mediterranean Sea water column

Author(s): Marc A. Besseling, Ellen C. Hopmans, Michel Koenen, Marcel T.J. van der Meer, Sanne Vreugdenhil, Stefan Schouten, Jaap S. Sinninghe Damsté, Laura Villanueva
Published in: Organic Geochemistry, Issue 135, 2019, Page(s) 16-31, ISSN 0146-6380
DOI: 10.1016/j.orggeochem.2019.06.008

Granulicella sibirica sp. nov., a psychrotolerant acidobacterium isolated from an organic soil layer in forested tundra, West Siberia

Author(s): Igor Y. Oshkin, Irina S. Kulichevskaya, W. Irene C. Rijpstra, Jaap S. Sinninghe Damsté, Andrey L. Rakitin, Nikolai V. Ravin, Svetlana N. Dedysh
Published in: International Journal of Systematic and Evolutionary Microbiology, Issue 69/4, 2019, Page(s) 1195-1201, ISSN 1466-5026
DOI: 10.1099/ijsem.0.003290

Edaphobacter lichenicola sp. nov., a member of the family Acidobacteriaceae from lichen-dominated forested tundra

Author(s): Svetlana E. Belova, Natalia E. Suzina, W. Irene C. Rijpstra, Jaap S. Sinninghe Damsté, Svetlana N. Dedysh
Published in: International Journal of Systematic and Evolutionary Microbiology, Issue 68/4, 2018, Page(s) 1265-1270, ISSN 1466-5026
DOI: 10.1099/ijsem.0.002663

Oleiharenicola alkalitolerans gen. nov., sp. nov., a new member of the phylum Verrucomicrobia isolated from an oilsands tailings pond

Author(s): Fauziah F. Rochman, Joong-Jae Kim, W. Irene C. Rijpstra, Jaap S. Sinninghe Damsté, Peter Schumann, Tobin J. Verbeke, Peter F. Dunfield
Published in: International Journal of Systematic and Evolutionary Microbiology, Issue 68/4, 2018, Page(s) 1078-1084, ISSN 1466-5026
DOI: 10.1099/ijsem.0.002624

An overview of the occurrence of ether- and ester-linked iso-diabolic acid membrane lipids in microbial cultures of the Acidobacteria: Implications for brGDGT paleoproxies for temperature and pH

Author(s): Jaap S. Sinninghe Damsté, W. Irene C. Rijpstra, Bärbel U. Foesel, Katharina J. Huber, Jörg Overmann, Satoshi Nakagawa, Joong Jae Kim, Peter F. Dunfield, Svetlana N. Dedysh, Laura Villanueva
Published in: Organic Geochemistry, Issue 124, 2018, Page(s) 63-76, ISSN 0146-6380
DOI: 10.1016/j.orggeochem.2018.07.006

Incomplete recovery of intact polar glycerol dialkyl glycerol tetraethers from lacustrine suspended biomass

Author(s): Yuki Weber, Jaap S. Sinninghe Damsté, Ellen C. Hopmans, Moritz F. Lehmann, Helge Niemann
Published in: Limnology and Oceanography: Methods, Issue 15/9, 2017, Page(s) 782-793, ISSN 1541-5856
DOI: 10.1002/lom3.10198

Membrane Lipid Composition of the Moderately Thermophilic Ammonia-Oxidizing Archaeon “ Candidatus Nitrosotenuis uzonensis” at Different Growth Temperatures

Author(s): Nicole J. Bale, Marton Palatinszky, W. Irene C. Rijpstra, Craig W. Herbold, Michael Wagner, Jaap S. Sinninghe Damsté
Published in: Applied and Environmental Microbiology, Issue 85/20, 2019, ISSN 0099-2240
DOI: 10.1128/aem.01332-19

Actinocrinis puniceicyclus gen. nov., sp. nov., an actinobacterium isolated from an acidic spring

Author(s): Joong-Jae Kim, Colbran E Marjerrison, Sabrina L Cornish Shartau, Allyson L Brady, Christine E Sharp, W. Irene C Rijpstra, Jaap S Sinninghe Damsté, Peter Schumann, Stephen E Grasby, Peter F Dunfield
Published in: International Journal of Systematic and Evolutionary Microbiology, Issue 67/3, 2017, Page(s) 602-609, ISSN 1466-5026
DOI: 10.1099/ijsem.0.001667

Demethylated hopanoids in ‘Ca. Methylomirabilis oxyfera’ as biomarkers for environmental nitrite-dependent methane oxidation

Author(s): Nadine T. Smit, Darci Rush, Diana X. Sahonero-Canavesi, Monique Verweij, Olivia Rasigraf, Simon Guerrero Cruz, Mike S.M. Jetten, Jaap S. Sinninghe Damsté, Stefan Schouten
Published in: Organic Geochemistry, Issue 137, 2019, Page(s) 103899, ISSN 0146-6380
DOI: 10.1016/j.orggeochem.2019.07.008

Biomarker evidence for nitrogen-fixing cyanobacterial blooms in a brackish surface layer in the Nile River plume during sapropel deposition

Author(s): Nicole J. Bale, Rick Hennekam, Ellen C. Hopmans, Denise Dorhout, Gert-Jan Reichart, Marcel van der Meer, Tracy A. Villareal, Jaap S. Sinninghe Damsté, Stefan Schouten
Published in: Geology, Issue 47/11, 2019, Page(s) 1088-1092, ISSN 0091-7613
DOI: 10.1130/g46682.1