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Big Data for Medical Analytics

Deliverables

Report on validation of pilots in Healthcare Industrialization (KPI tracking)

Report on validation of pilots in Healthcare Industrialization (KPI tracking)

Report on validation of pilots in Oncology (KPI tracking)

Report on validation of pilots in Oncology (KPI tracking)

Three causal models which identify variables and causal relationships that prohibit and enable the use of Big data technology and a workshop to validate and strengthen the model.

Three causal models which identify variables and causal relationships that prohibit and enable the use of Big data technology and a workshop to validate and strengthen the model.

Country specific infographics that summarize the relevant regulations for Big data technologies in the healthcare sector

Country specific infographics that summarize the relevant regulations for Big data technologies in the healthcare sector

Report on the results from Trial for pilots in Oncology

Report on the results from Trial for pilots in Oncology

Report on validation of pilots in Population Health (KPI tracking)

Report on validation of pilots in Population Health (KPI tracking)

Dissemination procedures

Dissemination procedures

Report on the results from Trial for pilots in Population Health

Report on the results from Trial for pilots in Population Health

Initial prototypes of specific components for all BigMedilytics pilots (software)

Initial prototypes of specific components for all BigMedilytics pilots (software)

Report on the results from Trial for pilots in Healthcare Industrialization

Report on the results from Trial for pilots in Healthcare Industrialization

Intermediate report on dissemination activities

Intermediate report on dissemination activities

Communication plan and tools

Communication plan and tools

Material prepared for the workshops and final conclusions

Material prepared for the workshops and final conclusions

Updated prototypes of specific components for all BigMedilytics pilots (software)

Updated prototypes of specific components for all BigMedilytics pilots (software)

Final report and outreach and dissemination activities

Final report and outreach and dissemination activities

Statistical model to measure the increase of productivity (at least 20%) including a workshop with all the pilot partners to validate the model.

Statistical model to measure the increase of productivity (at least 20%) including a workshop with all the pilot partners to validate the model.

Website portal

Website portal

A tool to develop a plan of action that is consistent with the business strategy for future pilots.

Combining the output and providing guidance for different kinds of stakeholders on (i) Health policy, (ii) Business models and (iii) Technology components (referred to as the BigMedilytics Blueprint) and privacy, legal and ethical aspects.

Final implementations of specific components for all BigMedilytics pilots (software)

Final implementations of specific components for all BigMedilytics pilots (software)

T0 base line measurement of the KPIs

T0 base line measurement of the KPIs

Searching for OpenAIRE data...

Publications

Private Hospital Workflow Optimization via Secure k-Means Clustering

Author(s): Gabriele Spini, Maran van Heesch, Thijs Veugen, Supriyo Chatterjea
Published in: Journal of Medical Systems, 44/1, 2020, ISSN 0148-5598
Publisher: Kluwer Academic/Plenum Publishers
DOI: 10.1007/s10916-019-1473-4

Privacy-preserving dataset combination and Lasso regression for healthcare predictions

Author(s): Marie Beth van Egmond, Gabriele Spini, Onno van der Galien, Arne IJpma, Thijs Veugen, Wessel Kraaij, Alex Sangers, Thomas Rooijakkers, Peter Langenkamp, Bart Kamphorst, Natasja van de L’Isle, Milena Kooij-Janic
Published in: BMC Medical Informatics and Decision Making, 21/1, 2021, ISSN 1472-6947
Publisher: BioMed Central
DOI: 10.1186/s12911-021-01582-y

TBase - an Integrated Electronic Health Record and Research Database for Kidney Transplant Recipients

Author(s): Danilo Schmidt, Bilgin Osmanodja, Matthias Pfefferkorn, Verena Graf, Dirk Raschke, Wiebke Duettmann, Marcel G. Naik, Carolin J. Gethmann, Manuel Mayrdorfer, Fabian Halleck, Lutz Liefeldt, Petra Glander, Oliver Staeck, Michael Mallach, Martin Peuker, Klemens Budde
Published in: Journal of Visualized Experiments, 170, 2021, ISSN 1940-087X
Publisher: MYJoVE Corporation
DOI: 10.3791/61971

Impact of Acute Hemoglobin Falls in Heart Failure Patients: A Population Study

Author(s): Cristina Lopez, Jose Luis Holgado, Antonio Fernandez, Inmaculada Sauri, Ruth Uso, Jose Luis Trillo, Sara Vela, Carlos Bea, Julio Nuñez, Ana Ferrer, Javier Gamez, Adrian Ruiz, Josep Redon
Published in: Journal of Clinical Medicine, 9/6, 2020, Page(s) 1869, ISSN 2077-0383
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/jcm9061869

Integrating Speculation Detection and Deep Learning to Extract Lung Cancer Diagnosis from Clinical Notes

Author(s): Oswaldo Solarte Pabón, Maria Torrente, Mariano Provencio, Alejandro Rodríguez-Gonzalez, Ernestina Menasalvas
Published in: Applied Sciences, 11/2, 2021, Page(s) 865, ISSN 2076-3417
Publisher: MDPI
DOI: 10.3390/app11020865

Trust, but Verify: Informed Consent, AI Technologies, and Public Health Emergencies

Author(s): Brian Pickering
Published in: Future Internet, 13/5, 2021, Page(s) 132, ISSN 1999-5903
Publisher: Future Internet
DOI: 10.3390/fi13050132

Impact of sex differences in co‐morbidities and medication adherence on outcome in 25 776 heart failure patients

Author(s): Muhammed T. Gürgöze, Onno P. Galiën, Marlou A.M. Limpens, Stefan Roest, René C. Hoekstra, Arne S. IJpma, Jasper J. Brugts, Olivier C. Manintveld, Eric Boersma
Published in: ESC Heart Failure, 8/1, 2021, Page(s) 63-73, ISSN 2055-5822
Publisher: John Wiley & Sons Ltd
DOI: 10.1002/ehf2.13113

eHealth in transplantation

Author(s): Wiebke Duettmann, Marcel G. Naik, Bianca Zukunft, Bilgin Osmonodja, Friederike Bachmann, Mira Choi, Roland Roller, Manuel Mayrdorfer, Fabian Halleck, Danilo Schmidt, Klemens Budde
Published in: Transplant International, 34/1, 2021, Page(s) 16-26, ISSN 0934-0874
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/tri.13778

Understanding the Uptake of Big Data in Health Care: Protocol for a Multinational Mixed-Methods Study

Author(s): Rik Wehrens, Vikrant Sihag, Sandra Sülz, Hilco van Elten, Erik van Raaij, Antoinette de Bont, Anne Marie Weggelaar-Jansen
Published in: JMIR Research Protocols, 9/10, 2020, Page(s) e16779, ISSN 1929-0748
Publisher: JMIR
DOI: 10.2196/16779

Heart failure and promotion of physical activity before and after cardiac rehabilitation (HF‐aPProACH): a study protocol

Author(s): Marlou A.M. Limpens, Muhammed T. Gürgöze, Mattie J. Lenzen, Stefan Roest, Trudy Voortman, Maryam Kavousi, Nienke Hoeve, Madoka Sunamura, Iris Uijl, Peter J. Spek, Jasper J. Brugts, Olivier C. Manintveld, Arne S. IJpma, Eric Boersma
Published in: ESC Heart Failure, 2021, ISSN 2055-5822
Publisher: Wiley Online Library
DOI: 10.1002/ehf2.13505

Digital Home-Monitoring of Patients after Kidney Transplantation: The MACCS Platform

Author(s): Wiebke Duettmann, Marcel G. Naik, Danilo Schmidt, Matthias Pfefferkorn, Matthias Kurz, Verena Graf, Andrea Kreichgauer, Severin Hoegl, Max Haenska, Tim Gielsdorf, Tillmann Breitenstein, Bilgin Osmanodja, Petra Glander, Jannis Bakker, Manuel Mayrdorfer, Carolin J. Gethmann, Friederike Bachmann, Mira Choi, Eva Schrezenmeier, Bianca Zukunft, Fabian Halleck, Klemens Budde
Published in: Journal of Visualized Experiments, 170, 2021, ISSN 1940-087X
Publisher: MYJoVE Corporation
DOI: 10.3791/61899

Acute kidney injury in heart failure: a population study

Author(s): Jose Luis Holgado, Cristina Lopez, Antonio Fernandez, Inmaculada Sauri, Ruth Uso, Jose Luis Trillo, Sara Vela, Julio Nuñez, Josep Redon, Adrian Ruiz
Published in: ESC Heart Failure, 2020, ISSN 2055-5822
Publisher: John Wiley & Sons Ltd on behalf of the European Society of Cardiology
DOI: 10.1002/ehf2.12595

Radiomics for predicting response to neoadjuvant chemotherapy treatment in breast cancer

Author(s): Simona Rabinovici-Cohen, Tal Tlusty, Ami Abutbul, Kari Antila, Xose Fernandez, Beatriz Grandal Rejo, Efrat Hexter, Oliver Hijano-Cubelos, Abed Khateeb, Juha Pajula, Shaked Perek
Published in: Medical Imaging 2020: Imaging Informatics for Healthcare, Research, and Applications, 2020, Page(s) 45, ISBN 9781510634046
Publisher: SPIE
DOI: 10.1117/12.2551374

Fuzzy Inference System for Risk Evaluation in Gestational Diabetes Mellitus

Author(s): Carlos Salort Sanchez, Suzanne Smyth, Elizabeth Tully, Joanna Griffin, Luke Heaphy, Niamh Redmond, Fionnuala Breathnach, Jan Baumbach, Cristian Axenie
Published in: 2019 IEEE 19th International Conference on Bioinformatics and Bioengineering (BIBE), 2019, Page(s) 947-952, ISBN 978-1-7281-4617-1
Publisher: IEEE
DOI: 10.1109/bibe.2019.00177

Exploring Diachronic Changes of Biomedical Knowledge using Distributed Concept Representations

Author(s): Gaurav Vashisth, Jan-Niklas Voigt-Antons, Michael Mikhailov, Roland Roller
Published in: Proceedings of the 18th BioNLP Workshop and Shared Task, 2019, Page(s) 348-358
Publisher: Association for Computational Linguistics
DOI: 10.18653/v1/w19-5037

MoRTy: Unsupervised Learning of Task-specialized Word Embeddings by Autoencoding

Author(s): Nils Rethmeier, Barbara Plank
Published in: Proceedings of the 4th Workshop on Representation Learning for NLP (RepL4NLP-2019), 2019, Page(s) 49-54
Publisher: Association for Computational Linguistics
DOI: 10.18653/v1/w19-4307

Enabling analytics on sensitive medical data with secure multi-party computation

Author(s): Veeningen, Meilof; Chatterjea, Supriyo; Horváth, Anna Zsófia; Spindler, Gerald; Boersma, Eric; Spek, Peter; Galiën, Onno; Gutteling, Job; Kraaij, Wessel; Veugen, Thijs
Published in: 2, 2018
Publisher: European Federation for Medical Informatics (EFMI) and IOS Press
DOI: 10.3233/978-1-61499-852-5-76

Deep Learning in Information Security

Author(s): Thaler, Stefan; Menkovski, Vlado; Petkovic, Milan
Published in: 1, 2018
Publisher: ICLR 2019

Coping with the general data protection regulation; anonymization through multi-party computation technology

Author(s): Wouter van Haaften / Alex Sangers / Tom van Engers / Somayeh Djafari
Published in: International Legal Informatics Symposium 2020 (IRIS2020), 29 February 2020, 2020
Publisher: International Legal Informatics Symposium

From Witch's Shot to Music Making Bones -- Resources for Medical Laymen to Technical Language and Vice Versa

Author(s): Seiffe, Laura; Marten, Oliver; Mikhailov, Michael; Schmeier, Sven; Möller, Sebastian; Roller, Roland
Published in: 1, 2020
Publisher: European Language Resources Association

Information Extraction Models for German Clinical Text

Author(s): Roland Roller, Laura Seiffe, Ammer Ayach, Sebastian Moller, Oliver Marten, Michael Mikhailov, Christoph Alt, Danilo Schmidt, Fabian Halleck, Marcel Naik, Wiebke Duettmann, Klemens Budde
Published in: 2020 IEEE International Conference on Healthcare Informatics (ICHI), 2020, Page(s) 1-2, ISBN 978-1-7281-5382-7
Publisher: IEEE
DOI: 10.1109/ichi48887.2020.9374385

A Data-Driven Approach for Analyzing Healthcare Services Extracted from Clinical Records

Author(s): Dimitrios Vogiatzis; Ernestina Menasalvas Ruiz; Mariano Provencio; Maria-Esther Vidal; Maria Torrente; Alejandro Rodríguez González; George Paliouras; Manuel Scurti
Published in: CBMS, 4, 2020, ISSN 2372-9198
Publisher: IEEE
DOI: 10.5281/zenodo.3862243

Prediction of Five-Year Breast Cancer Recurrence in Women Treated with Neoadjuvant Chemotherapy

Author(s): Rabinovici-Cohen S., Fernandez X., Grandal Rejo B., Hexter E., Hijano Cubelos O., Pajula J., Polonen H., Reyal F., Rosen-Zvi M.
Published in: 2021
Publisher: AMIA Annual Symposium

Big Data im Gesundheitswesen – Regulierung und Herausforderungen in acht europäischen Ländern (Big Data in healthcare – regulation and challenges in eight European countries)

Author(s): Rik Wehrens, Johanna Kostenzer
Published in: ÖGPH-Newsletter Juni 2019, 2019, Page(s) 2-3, ISSN 2309-2246
Publisher: ÖGPH, Österreichische Gesellschaft für Public Health (Austrian Association of Public Health)

Self-contained Information Retention Format (SIRF)

Author(s): Simona Rabinovici-Cohen, Philip Viana, Sam Fineberg
Published in: 2019, Page(s) 1-37
Publisher: ISO

Supervised Analysis for Phenotype Identification: The Case of Heart Failure Ejection Fraction Class

Author(s): Cristina Lopez, Jose Luis Holgado, Raquel Cortes, Inma Sauri, Antonio Fernandez, Jose Miguel Calderon, Julio Nuñez, Josep Redon
Published in: Bioengineering, 8/6, 2021, Page(s) 85, ISSN 2306-5354
Publisher: Bioengineering
DOI: 10.3390/bioengineering8060085

Data Science in Healthcare: Benefits, Challenges and Opportunities

Author(s): Ziawasch Abedjan, Nozha Boujemaa, Stuart Campbell, Patricia Casla, Supriyo Chatterjea, Sergio Consoli, Cristobal Costa-Soria, Paul Czech, Marija Despenic, Chiara Garattini, Dirk Hamelinck, Adrienne Heinrich, Wessel Kraaij, Jacek Kustra, Aizea Lojo, Marga Martin Sanchez, Miguel A. Mayer, Matteo Melideo, Ernestina Menasalvas, Frank Moller Aarestrup, Elvira Narro Artigot, Milan Petković, Diego Refor
Published in: Data Science for Healthcare - Methodologies and Applications, 2019, Page(s) 3-38, ISBN 978-3-030-05248-5
Publisher: Springer International Publishing
DOI: 10.1007/978-3-030-05249-2_1

Deep Metric Learning for Sequential Data Using Approximate Information

Author(s): Stefan Thaler, Vlado Menkovski, Milan Petkovic
Published in: Machine Learning and Data Mining in Pattern Recognition - 14th International Conference, MLDM 2018, New York, NY, USA, July 15-19, 2018, Proceedings, Part I, 10934, 2018, Page(s) 269-282, ISBN 978-3-319-96135-4
Publisher: Springer International Publishing
DOI: 10.1007/978-3-319-96136-1_22

External Validation of a “Black-Box” Clinical Predictive Model in Nephrology: Can Interpretability Methods Help Illuminate Performance Differences?

Author(s): Harry F. da Cruz, Boris Pfahringer, Frederic Schneider, Alexander Meyer, Matthieu-P. Schapranow
Published in: Artificial Intelligence in Medicine - 17th Conference on Artificial Intelligence in Medicine, AIME 2019, Poznan, Poland, June 26–29, 2019, Proceedings, 11526, 2019, Page(s) 191-201, ISBN 978-3-030-21641-2
Publisher: Springer International Publishing
DOI: 10.1007/978-3-030-21642-9_25

Multimodal Prediction of Breast Cancer Relapse Prior to Neoadjuvant Chemotherapy Treatment

Author(s): Simona Rabinovici-Cohen, Ami Abutbul, Xosé M. Fernández, Oliver Hijano Cubelos, Shaked Perek, Tal Tlusty
Published in: Predictive Intelligence in Medicine - Third International Workshop, PRIME 2020, Held in Conjunction with MICCAI 2020, Lima, Peru, October 8, 2020, Proceedings, 12329, 2020, Page(s) 188-199, ISBN 978-3-030-59353-7
Publisher: Springer International Publishing
DOI: 10.1007/978-3-030-59354-4_18