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Synthetic Oligonucleotide Quality Control Software

Project description

A novel quality control tool will ensure synthetic DNA building blocks are up to par

In the 16 years since the human genome was sequenced in its entirety, methods to synthesise DNA and manipulate gene expression have advanced tremendously bringing about progress in medical science and biology, biotechnology, agriculture and consumer goods. A glaring gap in this area is the lack of rigorous quality control procedures for assessing synthetic DNA and its products. SOLQC is planning to fill the gap by optimising a software tool it has already tested in several other projects. In addition to improving the technology, the team is developing a sustainable business plan to make the tool broadly available.

Objective

DNA synthesis technology has greatly developed over recent years, serving a growing multi-billion synthetic DNA market. Synthetic DNA is used in projects that optimize reagents, chemicals, crops and other organisms, in projects seeking to increase the manufacturing efficiency for the above, as well as in studies of molecular regulation and other cellular processes. The latter is the focus of the MRG-GRammar H2020 FET project.
As the market and application range for synthetic DNA expand a need arises to test and quality control raw synthetic nucleic acids as well as products built upon such reagents. We have developed a prototype software tool for assessing quality parameters in synthetic DNA libraries and used it in several projects in the framework of MRG-GRammar
We propose to productize this prototype into a stable version that will be availed to a broader synthetic biology community. Our proposed product, SOLQC, is a software system that enables management, control and feedback in projects based on synthetic DNA and its applications.
Requested funding will be used to improve usability and user interface, to expand the implementation of analysis and statistical tools, to produce a stable version available to the scientific community and to commercial entities and, finally, to investigate potential sustainable mechanisms for supporting continued service, including commercial or service models

Fields of science (EuroSciVoc)

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Topic(s)

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Funding Scheme

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CSA - Coordination and support action

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Call for proposal

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(opens in new window) H2020-FETOPEN-2018-2020

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Coordinator

TECHNION - ISRAEL INSTITUTE OF TECHNOLOGY
Net EU contribution

Net EU financial contribution. The sum of money that the participant receives, deducted by the EU contribution to its linked third party. It considers the distribution of the EU financial contribution between direct beneficiaries of the project and other types of participants, like third-party participants.

€ 43 750,00
Address
SENATE BUILDING TECHNION CITY
32000 Haifa
Israel

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Activity type
Higher or Secondary Education Establishments
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Total cost

The total costs incurred by this organisation to participate in the project, including direct and indirect costs. This amount is a subset of the overall project budget.

€ 43 750,00

Participants (1)

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