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Tracing somatic evolution in corals with multi-omics: implications for longevity and adaptation

Project description

Somatic evolution and longevity in corals

How do corals maintain genome integrity and extreme longevity? Supported by the Marie Skłodowska-Curie Actions programme, the CORALOMICS project will answer this question. It is testing the role of multipotent progenitor cells, spatial cell lineage organisation and tissue turnover in shaping somatic mutation patterns. It will also use DNA methylation as a marker of cellular ageing and fate. To do this, the study will combine spatially resolved genome and methylome sequencing, single-cell sequencing to assess mutational load and gene expression states, and computational modelling to integrate these datasets. This approach will map somatic evolution processes across coral colonies. Project work will reveal principles of ageing and genome maintenance in modular organisms and improve understanding of coral resilience under environmental change.

Objective

Corals are foundation species that build reef ecosystems, supporting vast marine biodiversity, yet the cellular mechanisms underlying their extreme longevity remain poorly understood. As colonial, modular organisms, corals are capable of indeterminate size and lifespan, raising fundamental questions about how genome integrity is maintained. In unitary animals, somatic mutations drive age-associated decline and malignancy, but in corals, modularity allows deleterious mutations to be compartmentalized, and beneficial variants to spread or even enter the germline. This challenges canonical germline–soma separation and positions corals as a powerful system to study somatic evolution.
I hypothesize that intra-organismal genetic diversity in corals is shaped by persistent multipotent progenitors, spatial patterning of cell lineages, and turnover dynamics. DNA methylation, a robust biomarker of cellular age and fate, provides an additional layer of information.
I will deploy a multi-pronged genomics strategy: (i) genome and methylome sequencing of spatially mapped samples to respectively infer mutational landscapes and epigenetic aging signatures, (ii) single-cell sequencing to quantify mutational load and transcriptional states, and (iii) integrative computational modeling. This integrative approach will establish how somatic evolution operates in modular animals, linking cellular mechanisms to colony longevity, potential for somatic inheritance, and adaptive capacity under environmental change.

Fields of science (EuroSciVoc)

Keywords

Programme(s)

Topic(s)

Funding Scheme

HORIZON-TMA-MSCA-PF-EF - HORIZON TMA MSCA Postdoctoral Fellowships - European Fellowships

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Call for proposal

(opens in new window) HORIZON-MSCA-2025-PF

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Coordinator

ALFRED-WEGENER-INSTITUT HELMHOLTZ-ZENTRUM FUR POLAR- UND MEERESFORSCHUNG
Net EU contribution
€ 252 656,40
Address
AM HANDELSHAFEN 12
27570 Bremerhaven
Germany
Region
Bremen Bremen Bremerhaven, Kreisfreie Stadt
Activity type
Research Organisations
Links
Total cost
No data

Partners (2)