Data-driven control and prioritisation of non-EU-regulated contagious animal diseases

Informations projet

DECIDE

N° de convention de subvention: 101000494

DOI

10.3030/101000494

Date de signature de la CE 7 Mai 2021

Date de début 1 Juillet 2021

Date de fin 30 Juin 2026

Financé au titre de

• SOCIETAL CHALLENGES - Food security, sustainable agriculture and forestry, marine, maritime and inland water research, and the bioeconomy

Coût total

€ 9 998 805,00

Contribution de l’UE

€ 9 998 805,00

Coordonné par

UNIVERSITEIT UTRECHT
Netherlands

CORDIS fournit des liens vers les livrables publics et les publications des projets HORIZON.

Les liens vers les livrables et les publications des projets du 7e PC, ainsi que les liens vers certains types de résultats spécifiques tels que les jeux de données et les logiciels, sont récupérés dynamiquement sur OpenAIRE .

Livrables

Websites, patent fillings, videos etc. (1)

DECIDE website

with dedicated areas for different stakeholder groups

Other (2)

Open-source inference algorithm adaptable to specific cases

Open-source inference algorithm adaptable to specific cases.

Open-source software tools to perform multi-level monitoring of time series data

Open-source software tools to perform multi-level monitoring of time series data.

Documents, reports (5)

First set of practice abstracts

"The resulting innovative knowledge and easy accessible end-user material from this project will feed into the EIP-AGRI (The agricultural European Innovation Partnership) website for broad dissemination. The end-user material to be produced contains a substantial number of summaries for practitioners in the EIP common format (""practice abstracts""), including the characteristics of the project (e.g. contact details of partners, etc.). A full package of practice abstracts will be produced by the project, containing all the outcomes/recommendations which are ready for practice.A practice abstract is a short summary of around 1000-1500 characters (word count no spaces) which describes the main information/recommendation/practice that can serve the end-users in their daily practice. Guidance and templates for these practice abstracts are available on the EIP-AGRI web site:http://ec.europa.eu/eip/agriculture/en/content/eip-agri-common-format"

First intermediary report on communication and dissemination activities

Report on the implementation and assessment of communication and dissemination activities.

Generic framework for determining the economic burden of animal disease

A report describing the framework and its application to the pilot implementations

Status quo regarding psychological and social preconditions of the use of data tools

This report describes the preconditions of the use of data tools and highlights the most important barriers and drivers of technology adoption It will enable the other WPs to consider and incorporate the stakeholders viewpoint

Case-specific reports on potential of different data tools from WP3

This report describes the evaluation of various case-specific data tools. It will highlight difficulties and serve as a proof of concept for the data tools.

Publications

Peer reviewed articles (26)

Monitoring monthly mortality of maricultured Atlantic salmon (Salmo salar L.) in Scotland I. Dynamic linear models at production cycle level

Auteurs: Carolina Merca, Annette Simone Boerlage, Anders Ringgaard Kristensen, Dan Børge Jensen
Publié dans: Frontiers in Marine Science, Numéro 11, 2024, ISSN 2296-7745
Éditeur: Frontiers Media SA
DOI: 10.3389/fmars.2024.1436755

The DECIDE project: from surveillance data to decision-support for farmers and veterinarians

Auteurs: Gerdien van Schaik, Miel Hostens, Céline Faverjon, Dan B. Jensen, Anders R. Kristensen, Pauline Ezanno, Jenny Frössling, Fernanda Dórea, Britt-Bang Jensen, Luis Pedro Carmo, Wilma Steeneveld, Jonathan Rushton, William Gilbert, Angela Bearth, Michael Siegrist, Jasmeet Kaler, Johannes Ripperger, Jamuna Siehler, Sjaak de Wit, Beatriz Garcia-Morante, Joaquim Segalés, Bart Pardon, Jade Bokma, Mirja
Publié dans: Open Research Europe, Numéro 3, 2024, Page(s) 82, ISSN 2732-5121
Éditeur: Open Research Europe
DOI: 10.12688/openreseurope.15988.1

Learning and strategic imitation in modelling farmers’ dynamic decisions on bovine viral diarrhoea vaccination

Auteurs: Lina Cristancho-Fajardo, Elisabeta Vergu, Gaël Beaunée, Sandie Arnoux, Pauline Ezanno
Publié dans: Veterinary Research, Numéro 53, 2022, ISSN 1297-9716
Éditeur: BMC, part of Springer Nature
DOI: 10.1186/s13567-022-01112-2

How do pig veterinarians view technology-assisted data utilisation for pig health and welfare management? A qualitative study in Spain, the Netherlands, and Ireland

Auteurs: Xiao Zhou, Beatriz Garcia-Morante, Alison Burrell, Carla Correia-Gomes, Lucia Dieste-Pérez, Karlijn Eenink, Joaquim Segalés, Marina Sibila, Michael Siegrist, Tijs Tobias, Carles Vilalta, Angela Bearth
Publié dans: Porcine Health Management, Numéro 10, 2024, ISSN 2055-5660
Éditeur: Springer Science and Business Media LLC
DOI: 10.1186/s40813-024-00389-3

Harnessing uncertainty: A deep mechanistic approach for cautious diagnostic and forecast of Bovine Respiratory Disease

Auteurs: Théophile Ghislain Loïc Eyango Tabi, Maud Rouault, Victoria Potdevin, Xavier L’hostis, Sébastien Assié, Sébastien Picault, Nicolas Parisey
Publié dans: Preventive Veterinary Medicine, Numéro 233, 2024, Page(s) 106354, ISSN 0167-5877
Éditeur: Elsevier BV
DOI: 10.1016/j.prevetmed.2024.106354

Social and ethical implications of data and technology use on farms: a qualitative study of Swedish dairy and pig farmers

Auteurs: Charlotte Doidge, Jenny Frössling, Fernanda C. Dórea, Anna Ordell, Gema Vidal, Jasmeet Kaler
Publié dans: Frontiers in Veterinary Science, Numéro 10, 2023, ISSN 2297-1769
Éditeur: Frontiers Media
DOI: 10.3389/fvets.2023.1171107

Predicting footpad lesion scores of Dutch broiler flocks using routinely collected data

Auteurs: Yara Slegers, Miel Hostens, Sjaak de Wit, Arjan Stegeman, Dan B Jensen
Publié dans: Smart Agricultural Technology, Numéro 12, 2025, Page(s) 101080, ISSN 2772-3755
Éditeur: Elsevier BV
DOI: 10.1016/j.atech.2025.101080

Reusability challenges of livestock production data to improve animal health

Auteurs: Camille Delavenne, Gerdien van Schaik, Jenny Frössling, Angus Cameron, Céline Faverjon
Publié dans: Scientific Data, Numéro 12, 2025, ISSN 2052-4463
Éditeur: Springer Science and Business Media LLC
DOI: 10.1038/s41597-025-04785-4

Industry stakeholders attitudes and beliefs about tail biting and docking in pigs – A case study in Switzerland and Spain

Auteurs: Andrea Knörr, Xiao Zhou, Angela Bearth, Beatriz Garcia-Morante, Carla Correia-Gomes, Joaquim Segalés, Thomas Echtermann, Michael Siegrist
Publié dans: Preventive Veterinary Medicine, Numéro 237, 2025, Page(s) 106444, ISSN 0167-5877
Éditeur: Elsevier BV
DOI: 10.1016/j.prevetmed.2025.106444

Data recording and use of data tools for pig health management: perspectives of stakeholders in pig farming

Auteurs: Xiao Zhou, Andrea Knörr, Beatriz Garcia Morante, Carla Correia-Gomes, Lucia Dieste Pérez, Joaquim Segalés, Marina Sibila, Carles Vilalta, Alison Burrell, Tijs Tobias, Michael Siegrist, Angela Bearth
Publié dans: Frontiers in Veterinary Science, Numéro 11, 2025, ISSN 2297-1769
Éditeur: Frontiers Media SA
DOI: 10.3389/fvets.2024.1490770

A dynamic framework for calculating the biomass of fattening pigs with an application in estimating the burden of porcine reproductive and respiratory syndrome in the Netherlands

Auteurs: Marloes Boeters, Wilma Steeneveld, Beatriz Garcia-Morante, Jonathan Rushton, Gerdien van Schaik
Publié dans: Preventive Veterinary Medicine, Numéro 234, 2024, Page(s) 106383, ISSN 0167-5877
Éditeur: Elsevier BV
DOI: 10.1016/j.prevetmed.2024.106383

Sea lice management in marine-based salmon farming: Public perceptions and acceptance in England and Scotland

Auteurs: Xiao Zhou, Angela Bearth, Michael Siegrist
Publié dans: Aquaculture, Numéro 593, 2024, Page(s) 741267, ISSN 0044-8486
Éditeur: Elsevier BV
DOI: 10.1016/j.aquaculture.2024.741267

Broiler flocks in production systems with slower-growing breeds and reduced stocking density receive fewer antibiotic treatments and have lower mortality

Auteurs: Y. Slegers, M. Hostens, M.G.R. Matthijs, J.A. Stegeman, J.J. de Wit
Publié dans: Poultry Science, Numéro 103, 2024, Page(s) 104197, ISSN 0032-5791
Éditeur: Poultry Science Association Inc.
DOI: 10.1016/j.psj.2024.104197

A Living Lab approach to understanding dairy farmers' technology and data needs to improve herd health: Focus groups from 6 European countries

Auteurs: C. Doidge, L.M. Ånestad, A. Burrell, J. Frössling, L. Palczynski, B. Pardon, A. Veldhuis, J. Bokma, L.P. Carmo, P. Hopp, M. Guelbenzu-Gonzalo, N.V. Meunier, A. Ordell, I. Santman-Berends, G. van Schaik, J. Kaler
Publié dans: Journal of Dairy Science, Numéro 107, 2024, Page(s) 5754-5778, ISSN 0022-0302
Éditeur: American Dairy Science Association
DOI: 10.3168/jds.2024-24155

How delousing affect the short-term growth of Atlantic salmon (Salmo salar)

Auteurs: Cecilie Sviland Walde; Marit Stormoen; Jostein Mulder Pettersen; David Persson; Magnus Vikan Røsæg
Publié dans: AQUACULTURE, Numéro 561, 738720, 2022, ISSN 0044-8486
Éditeur: Elsevier BV
DOI: 10.1016/j.aquaculture.2022.738720

Exploring the data divide through a social practice lens: A qualitative study of UK cattle farmers

Auteurs: C. Doidge, L. Palczynski, X. Zhou, A. Bearth, G. van Schaik, J. Kaler
Publié dans: Preventive Veterinary Medicine, Numéro 220, 2024, Page(s) 106030, ISSN 0167-5877
Éditeur: Elsevier BV
DOI: 10.1016/j.prevetmed.2023.106030

The economic impact of endemic respiratory disease in pigs and related interventions - a systematic review

Auteurs: Marloes Boeters, Beatriz Garcia-Morante, Gerdien van Schaik, Joaquim Segalés, Jonathan Rushton, Wilma Steeneveld
Publié dans: Porcine Health Management, Numéro 9, 2023, ISSN 2055-5660
Éditeur: BMC, part of Springer Nature
DOI: 10.1186/s40813-023-00342-w

Dairy farmers’ intention to use calf management technologies in four European countries: A QCA and PLS-SEM approach

Auteurs: Charlotte Doidge, Jade Bokma, Noëlle ten Brinke, Luis Pedro Carmo, Petter Hopp, Inge Santman-Berends, Anouk Veldhuis, Jasmeet Kaler
Publié dans: Preventive Veterinary Medicine, Numéro 236, 2025, Page(s) 106417, ISSN 0167-5877
Éditeur: Elsevier BV
DOI: 10.1016/j.prevetmed.2025.106417

Exploring Options for Syndromic Surveillance in Aquaculture: Outbreak Detection of Salmon Pancreas Disease Using Production Data from Norwegian Farms

Auteurs: Victor H. S. Oliveira, Fernanda C. Dórea, Katharine R. Dean, Britt Bang Jensen
Publié dans: Transboundary and Emerging Diseases, Numéro 2024, 2024, Page(s) 1-12, ISSN 1865-1674
Éditeur: Blackwell-Wiss.-Verl
DOI: 10.1155/2024/9861677

The economic impact of decreased mortality and increased growth associated with preventing, replacing or improving current methods for delousing farmed Atlantic salmon in Norway

Auteurs: Cecilie Sviland Walde, Britt Bang Jensen, Marit Stormoen, Frank Asche, Bård Misund, Jostein Mulder Pettersen
Publié dans: Preventive Veterinary Medicine, Numéro 221, 2023, Page(s) 106062, ISSN 0167-5877
Éditeur: Elsevier BV
DOI: 10.1016/j.prevetmed.2023.106062

Leveraging artificial intelligence and software engineering methods in epidemiology for the co-creation of decision-support tools based on mechanistic models

Auteurs: Sébastien Picault, Guita Niang, Vianney Sicard, Baptiste Sorin-Dupont, Sébastien Assié, Pauline Ezanno
Publié dans: Preventive Veterinary Medicine, Numéro 228, 2024, Page(s) 106233, ISSN 0167-5877
Éditeur: Elsevier BV
DOI: 10.1016/j.prevetmed.2024.106233

Modelling the effects of antimicrobial metaphylaxis and pen size on bovine respiratory disease in high and low risk fattening cattle

Auteurs: Sébastien Picault, Pauline Ezanno, Kristen Smith, David Amrine, Brad White, Sébastien Assié
Publié dans: Veterinary Research, Numéro 53, 7, 2022, ISSN 0928-4249
Éditeur: BioMed Central
DOI: 10.1186/s13567-022-01094-1

A qualitative survey approach to investigating beef and dairy veterinarians’ needs in relation to technologies on farms

Auteurs: C. Doidge, A. Burrell, G. van Schaik, J. Kaler
Publié dans: animal, Numéro 18, 2024, Page(s) 101124, ISSN 1751-7311
Éditeur: Cambridge University Press
DOI: 10.1016/j.animal.2024.101124

Monitoring monthly mortality of maricultured Atlantic salmon (Salmo salar L.) in Scotland II. A hierarchical dynamic linear model

Auteurs: Carolina Merca, Annette Simone Boerlage, Anders Ringgaard Kristensen, Dan Børge Jensen
Publié dans: Frontiers in Marine Science, Numéro 11, 2024, ISSN 2296-7745
Éditeur: Frontiers Media SA
DOI: 10.3389/fmars.2024.1483796

The use of data for health and welfare management of farmed salmons in Norway, Scotland, and Ireland

Auteurs: Xiao Zhou, Annette S. Boerlage, Britt Bang Jensen, Kristine Gismervik, Victor H.S. Oliveira, Ian Hutchinson, Alison Burrell, David A. Graham, Charlotte Doidge, Jasmeet Kaler, Gerdien van Schaik, Michael Siegrist, Angela Bearth
Publié dans: Preventive Veterinary Medicine, Numéro 239, 2025, Page(s) 106512, ISSN 0167-5877
Éditeur: Elsevier BV
DOI: 10.1016/j.prevetmed.2025.106512

The Irish cattle population structured by enterprise type: overview, trade & trends

Auteurs: Jonas Brock, Martin Lange, Jamie A. Tratalos, Natascha Meunier, Maria Guelbenzu-Gonzalo, Simon J. More, Hans-Hermann Thulke, David A. Graham
Publié dans: Irish Veterinary Journal, 2022, ISSN 2046-0481
Éditeur: BioMed Central Ltd (BMC, part of Springer Nature)
DOI: 10.1186/s13620-022-00212-x

Book chapters (1)

Agri Semantics: developments to improve data interoperability to support farm information management and decision support systems in agriculture

Auteurs: null null, Saba Noor, Jade Bokma, null null, Bart Pardon, null null, Gerdien van Schaik, null null, Miels Hostens, null null
Publié dans: Burleigh Dodds Series in Agricultural Science, Smart farms: Improving data-driven decision making in agriculture, Numéro Part 1, Chapter 4, 2024, Page(s) 75-96
Éditeur: Burleigh Dodds Science Publishing Limited
DOI: 10.19103/as.2023.0132.05