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CORDIS

Deep learning-based text mining for interpretation of omics data

CORDIS provides links to public deliverables and publications of HORIZON projects.

Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Publications

The STRING database in 2023: protein–protein association networks and functional enrichment analyses for any sequenced genome of interest (opens in new window)

Author(s): Damian Szklarczyk 1,2, Rebecca Kirsch 3, Mikaela Koutrouli 3, Katerina Nastou 3, Farrokh Mehryary 4, Radja Hachilif 1,2, Annika L. Gable 1,2, Tao Fang 1,2, Nadezhda T. Doncheva 3, Sampo Pyysalo 4, Peer Bork 5,6,7,8,*, Lars J. Jensen 3,* and Christian von Mering 1,2,* 1 Department of Molecular Life Sciences, University of Zurich, 8057 Zurich, Switzerland, 2 SIB Swiss Institute of Bioinformatics, 1
Published in: Nucleic Acids Research, Issue 2023, Vol. 51, Database issue, 2023, Page(s) D638–D646, ISSN 0305-1048
Publisher: Oxford University Press
DOI: 10.1093/nar/gkac1000

S1000: a better taxonomic name corpus for biomedical information extraction (opens in new window)

Author(s): Jouni Luoma 1,† , Katerina Nastou 2,† , Tomoko Ohta 3 , Harttu Toivonen 1 , Evangelos Pafilis4 , Lars Juhl Jensen 2, *, Sampo Pyysalo 1, * 1 TurkuNLP Group, Department of Computing, University of Turku, Turku 20014, Finland 2 Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Blegdamsvej 3, Copenhagen 2200, Denmark 3 Textimi, Tokyo, Japan 4 Hellenic Centre for Mari
Published in: Bioinformatics, Issue Volume 39, Issue 6, June 2023, 2023, ISSN 1367-4803
Publisher: Oxford University Press
DOI: 10.1093/bioinformatics/btad369

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