The STRING database in 2023: protein–protein association networks and functional enrichment analyses for any sequenced genome of interest
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Auteurs:
Damian Szklarczyk 1,2, Rebecca Kirsch 3, Mikaela Koutrouli 3, Katerina Nastou 3,
Farrokh Mehryary 4, Radja Hachilif 1,2, Annika L. Gable 1,2, Tao Fang 1,2,
Nadezhda T. Doncheva 3, Sampo Pyysalo 4, Peer Bork 5,6,7,8,*, Lars J. Jensen 3,* and
Christian von Mering 1,2,*
1 Department of Molecular Life Sciences, University of Zurich, 8057 Zurich, Switzerland,
2 SIB Swiss Institute of Bioinformatics, 1
Publié dans:
Nucleic Acids Research, Numéro 2023, Vol. 51, Database issue, 2023, Page(s) D638–D646, ISSN 0305-1048
Éditeur:
Oxford University Press
DOI:
10.1093/nar/gkac1000
S1000: a better taxonomic name corpus for biomedical information extraction
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Auteurs:
Jouni Luoma 1,† , Katerina Nastou 2,† , Tomoko Ohta 3 , Harttu Toivonen 1 , Evangelos Pafilis4 ,
Lars Juhl Jensen 2, *, Sampo Pyysalo 1, *
1 TurkuNLP Group, Department of Computing, University of Turku, Turku 20014, Finland
2 Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Blegdamsvej 3, Copenhagen 2200, Denmark
3 Textimi, Tokyo, Japan
4 Hellenic Centre for Mari
Publié dans:
Bioinformatics, Numéro Volume 39, Numéro 6, June 2023, 2023, ISSN 1367-4803
Éditeur:
Oxford University Press
DOI:
10.1093/bioinformatics/btad369
