X-chromosome driven speciation through testes-expressed genes: comparative population genomics meets scRNA analysis in primates

Project Information

Xspect

Grant agreement ID: 101054718

DOI

10.3030/101054718

EC signature date 9 August 2022

Start date 1 October 2022

End date 30 September 2027

Funded under

• European Research Council (ERC)

Total cost

€ 2 499 369,00

EU contribution

€ 2 499 369,00

Coordinated by

AARHUS UNIVERSITET
Denmark

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Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Deliverables

Documents, reports (1)

Data Management Plan

Publications

Peer reviewed articles (7)

Identification of constrained sequence elements across 239 primate genomes

Author(s): Lukas F. K. Kuderna, Jacob C. Ulirsch, Sabrina Rashid, Mohamed Ameen, Laksshman Sundaram, Glenn Hickey, Anthony J. Cox, Hong Gao, Arvind Kumar, Francois Aguet, Matthew J. Christmas, Hiram Clawson, Maximilian Haeussler, Mareike C. Janiak, Martin Kuhlwilm,
Published in: Nature, 2024, ISSN 1476-4687
Publisher: Springer Nature
DOI: 10.1038/S41586-023-06798-8

Extraordinary selection on the human X chromosome associated with archaic admixture

Author(s): Laurits Skov, Moise` s Coll Macia` , Elise Anne Lucotte, Maria Izabel Alves Cavassim, David Castellano, Mikkel Heide Schierup, Kasper Munch
Published in: Cell genomics, 2023, ISSN 2666-979X
Publisher: Cell Press
DOI: 10.1016/J.XGEN.2023.100274

Estimating gene conversion tract length and rate from PacBio HiFi data

Author(s): Anders Poulsen Charmouh; Peter Sørud Porsborg; Lasse Thorup Hansen; Søren Besenbacher; Sofia Boeg Winge; Kristian Almstrup; Asger Hobolth; Thomas Bataillon; Mikkel Heide Schierup
Published in: Molecular Biology and Evolution, 2024, ISSN 1537-1719
Publisher: Oxford Academic
DOI: 10.1093/MOLBEV/MSAF019

Eighty million years of rapid evolution of the primate Y chromosome

Author(s): Yang Zhou  1 , Xiaoyu Zhan1 , Jiazheng Jin1 , Long Zhou  2,3, Juraj Bergman  4,5, Xuemei Li1,6, Marjolaine Marie C. Rousselle5 , Meritxell Riera Belles5 , Lan Zhao7 , Miaoquan Fang1 , Jiawei Chen1 , Qi Fang  1 , Lukas Kuderna  8 , Tomas Marques-Bonet  8,9
Published in: nature ecology & evolution, 2023, ISSN 2397-334X
Publisher: Springer Nature
DOI: 10.1038/S41559-022-01974-X

TRAILS: Tree reconstruction of ancestry usingincomplete lineage sorting

Author(s): Iker Rivas-González ,Mikkel H. Schierup,John Wakeley,Asger Hobolth
Published in: PLOS Genetics, 2024, ISSN 1932-6203
Publisher: Public Library of Science
DOI: 10.1371/JOURNAL.PGEN.1010836

Characterizing the evolution and phenotypic impact of ampliconic Y chromosome regions

Author(s): Elise A. Lucotte 1,2 , Valdís Björt Guðmundsdóttir3,4, Jacob M. Jensen1 , Laurits Skov1 , Moisès Coll Macià 1 , Kristian Almstrup 5 , Mikkel H. Schierup 1 , Agnar Helgason 3,4 & Kari Stefansson
Published in: Nature communications, 2023, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/S41467-023-39644-6

Genome-wide coancestry reveals details of ancient and recent male-driven reticulation in baboons

Author(s): Erik F Sørensen, R Alan Harris, Liye Zhang, Muthuswamy Raveendran, Lukas FK Kuderna, Jerilyn A Walker, Jessica M Storer, Martin Kuhlwilm, Claudia Fontsere, Lakshmi Seshadri, Christina M Bergey, Andrew S Burrell, Juraj Bergman, Jane E Phillips-Conroy, Feka
Published in: Science, 2023, ISSN 0036-8075
Publisher: American Association for the Advancement of Science
DOI: 10.1126/SCIENCE.ABN815