Data-driven cancer genome interpretation for personalised cancer treatment

Project Information

CGI-Clinics

Grant agreement ID: 101057509

DOI

10.3030/101057509

EC signature date 20 May 2022

Start date 1 November 2022

End date 31 October 2027

Funded under

• Health

Total cost

€ 9 584 298,00

EU contribution

€ 9 584 298,00

Coordinated by

FUNDACIO INSTITUT DE RECERCA BIOMEDICA (IRB BARCELONA)
Spain

CORDIS provides links to public deliverables and publications of HORIZON projects.

Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Deliverables

Websites, patent fillings, videos etc. (2)

Educational material and videos

These materials will have a focus on improving the communication skills of clinicians and complement the deployment of eduCGI. They will relate to the eduCGI report (D2.2). And a video on Artificial Intelligence in Personalised Medicine (related to task 9.5)

Visual identity, website and social media

Project branding, logo are available, website is published and social media accounts operative.

Documents, reports (4)

eduCGI report including the design and content

This report will contain the patient feedback formed to determine the content of the eduCGI.

MTB and GTB guidelines

This document will serve as a guideline for the MTB and GTB experts. Several versions of the document are expected, based on updates and modifications during the course of implementation. This deliverable will also work as a frame to prepare D3.2.

Updated CGI-Clinics Data Sharing Policy

The CGI-Clinics Data Sharing Policy update the first version and will describe which data will be shared among CGI- partners or beyond and will indicate which terms and procedures will have to be followed. The update of the Data Sharing Policy will have to be approved by all partners.

CGI-Clinics Data Sharing Policy

The CGI-Clinics Data Sharing Policy will describe which data will be shared among CGI-partners or beyond and will indicate which terms and procedures will have to be followed. The Data Sharing Policy will have to be approved by all partners.

Publications

Peer reviewed articles (4)

Five latent factors underlie response to immunotherapy

Author(s): Joseph Usset, Axel Rosendahl Huber, Maria A. Andrianova, Eduard Batlle, Joan Carles, Edwin Cuppen, Elena Elez, Enriqueta Felip, Marina Gómez-Rey, Deborah Lo Giacco, Francisco Martinez-Jimenez, Eva Mu
Published in: Nature genetics, 2024, ISSN 1546-1718
Publisher: Nature
DOI: 10.1038/S41588-024-01899-0

Identification of Clonal Hematopoiesis Driver Mutations through In Silico Saturation Mutagenesis

Author(s): Santiago Demajo, Joan Enric Ramis-Zaldivar, Ferran Muinos, Miguel L. Grau, Maria Andrianova, Nuria Lopez-Bigas, Abel Gonzalez-Perez
Published in: Cancer discovey, 2024, ISSN 2159-8290
Publisher: American Association for Cancer Research
DOI: 10.1158/2159-8290.CD-23-1416

Oncodrive3D: Fast and accurate detection of structural clusters of somatic mutations under positive selection

Author(s): Stefano Pellegrini, Olivia Dove Estrella, Ferran Muiños, Nuria Lopez-Bigas, Abel Gonzalez-Perez
Published in: Nucleic Acids Research, 2025, ISSN 1362-4962
Publisher: Oxford University Press
DOI: 10.1093/NAR/GKAF776

OpenVariant: a toolkit to parse and operate multiple input file formats

Author(s): Martınez-Millan D, Brando F, Grau ML, Sanchez-Guixe M, Lopez-Elorduy C, Reyes-Salazar I, Deu-Pons J, Lopez-Bigas N, Gonzalez-Perez A
Published in: Bioinformatics, 2024, ISSN 1367-4811
Publisher: Oxford University Press
DOI: 10.1093/BIOINFORMATICS/BTAE714