Data-driven cancer genome interpretation for personalised cancer treatment

Informations projet

CGI-Clinics

N° de convention de subvention: 101057509

DOI

10.3030/101057509

Date de signature de la CE 20 Mai 2022

Date de début 1 Novembre 2022

Date de fin 31 Octobre 2027

Financé au titre de

• Health

Coût total

€ 9 584 298,00

Contribution de l’UE

€ 9 584 298,00

Coordonné par

FUNDACIO INSTITUT DE RECERCA BIOMEDICA (IRB BARCELONA)
Spain

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Les liens vers les livrables et les publications des projets du 7e PC, ainsi que les liens vers certains types de résultats spécifiques tels que les jeux de données et les logiciels, sont récupérés dynamiquement sur OpenAIRE .

Livrables

Websites, patent fillings, videos etc. (1)

Visual identity, website and social media

Project branding, logo are available, website is published and social media accounts operative.

Documents, reports (2)

CGI-Clinics Data Sharing Policy

The CGI-Clinics Data Sharing Policy will describe which data will be shared among CGI-partners or beyond and will indicate which terms and procedures will have to be followed. The Data Sharing Policy will have to be approved by all partners.

MTB and GTB guidelines

This document will serve as a guideline for the MTB and GTB experts. Several versions of the document are expected, based on updates and modifications during the course of implementation. This deliverable will also work as a frame to prepare D3.2.

Publications

Peer reviewed articles (4)

Five latent factors underlie response to immunotherapy

Auteurs: Joseph Usset, Axel Rosendahl Huber, Maria A. Andrianova, Eduard Batlle, Joan Carles, Edwin Cuppen, Elena Elez, Enriqueta Felip, Marina Gómez-Rey, Deborah Lo Giacco, Francisco Martinez-Jimenez, Eva Mu
Publié dans: Nature genetics, 2024, ISSN 1546-1718
Éditeur: Nature
DOI: 10.1038/S41588-024-01899-0

Identification of Clonal Hematopoiesis Driver Mutations through In Silico Saturation Mutagenesis

Auteurs: Santiago Demajo, Joan Enric Ramis-Zaldivar, Ferran Muinos, Miguel L. Grau, Maria Andrianova, Nuria Lopez-Bigas, Abel Gonzalez-Perez
Publié dans: Cancer discovey, 2024, ISSN 2159-8290
Éditeur: American Association for Cancer Research
DOI: 10.1158/2159-8290.CD-23-1416

Oncodrive3D: Fast and accurate detection of structural clusters of somatic mutations under positive selection

Auteurs: Stefano Pellegrini, Olivia Dove Estrella, Ferran Muiños, Nuria Lopez-Bigas, Abel Gonzalez-Perez
Publié dans: Nucleic Acids Research, 2025, ISSN 1362-4962
Éditeur: Oxford University Press
DOI: 10.1093/NAR/GKAF776

OpenVariant: a toolkit to parse and operate multiple input file formats

Auteurs: Martınez-Millan D, Brando F, Grau ML, Sanchez-Guixe M, Lopez-Elorduy C, Reyes-Salazar I, Deu-Pons J, Lopez-Bigas N, Gonzalez-Perez A
Publié dans: Bioinformatics, 2024, ISSN 1367-4811
Éditeur: Oxford University Press
DOI: 10.1093/BIOINFORMATICS/BTAE714