Modern Approaches to the Monitoring of BiOdiversity

Información del proyecto

MAMBO

Identificador del acuerdo de subvención: 101060639

DOI

10.3030/101060639

Fecha de la firma de la CE 2 Junio 2022

Fecha de inicio 1 Septiembre 2022

Fecha de finalización 31 Agosto 2026

Financiado con arreglo a

• Food, Bioeconomy Natural Resources, Agriculture and Environment

Coste total

€ 3 703 783,75

Aportación de la UE

€ 3 703 783,00

Coordinado por

AARHUS UNIVERSITET
Denmark

CORDIS proporciona enlaces a los documentos públicos y las publicaciones de los proyectos de los programas marco HORIZONTE.

Los enlaces a los documentos y las publicaciones de los proyectos del Séptimo Programa Marco, así como los enlaces a algunos tipos de resultados específicos, como conjuntos de datos y «software», se obtienen dinámicamente de OpenAIRE .

Resultado final

Documents, reports (9)

Project identity, promotional materials pack and website running

(Project identity, promotional materials pack and website running)

Review of habitat condition metrics used across the EU, suitable for RS

(Review of habitat condition metrics used across the EU, suitable for RS)

Guidelines for data standards and technical specifications of MAMBO tools

(Guidelines for data standards and technical specifications of MAMBO tools )

Risk Management Plan

(Risk Management Plan)

Report on stakeholder mapping and network analysis

(Report on stakeholder mapping and network analysis)

Report on optimal positioning and linkage of MAMBO tools to KCBD and RI landscape

(Report on optimal positioning and linkage of MAMBO tools to KCBD and RI landscape )

Report on stakeholder needs

(Report on stakeholder needs)

Assessment of interoperability and maturity for upscaling habitat condition metrics

(Assessment of interoperability and maturity for upscaling habitat condition metrics )

Project Management and Quality Assurance Plan (Updated each reporting period)

(Project Management and Quality Assurance Plan (Updated each reporting period))

Other (1)

Open-source deep learning framework for habitat extent mapping - version 1.0

(Open-source deep learning framework for habitat extent mapping - version 1.0)

Publicaciones

Other (2)

The GeoLifeCLEF 2023 Dataset to evaluate plant species distribution models at high spatial resolution across Europe

Autores: Christophe Botella, Benjamin Deneu, Diego Marcos, Maximilien Servajean, Joaquim Estopinan, et al..
Publicado en: ArXiv preprint - Populations and Evolution, 2023, ISSN 2331-8422
Editor: ArXiv.org
DOI: 10.48550/arXiv.2308.05121

A General Method for Detection and Segmentation of Terrestrial Arthropods in Images

Autores: Asger Svenning, Guillaume Mougeot, Jamie Alison, Daphne Chevalier, Nisa Luise Chavez Molina, Song-Quan Ong, Kim Bjerge, Juli Carrillo, Toke Thomas Hoeye, Quentin Geissmann
Publicado en: 2025
Editor: Cold Spring Harbor Laboratory
DOI: 10.1101/2025.04.08.647223

Peer reviewed articles (12)

Modern Approaches to the Monitoring of Biоdiversity (MAMBO)

Autores: Høye TT, August T, Balzan MV, Biesmeijer K, Bonnet P, Breeze TD, Dominik C, Gerard F, Joly A, Kalkman V, Kissling WD, Metodiev T, Moeslund J, Potts S, Roy DB, Schweiger O, Senapathi D, Settele J, Stoev P, Stowell D
Publicado en: Research Ideas and Outcomes, Edición 9, 2023, ISSN 2367-7163
Editor: Pensoft Publishers
DOI: 10.3897/RIO.COLL.223

Towards edge processing of images from insect camera traps

Autores: Kim Bjerge, Henrik Karstoft, Toke T. Høye
Publicado en: Remote Sensing in Ecology and Conservation, 2025, ISSN 2056-3485
Editor: Wiley
DOI: 10.1002/RSE2.70007

Data from three camera trapping pilots in the Amsterdam Water Supply Dunes of the Netherlands

Autores: Julian C. Evans, Rotem Zilber, W. Daniel Kissling
Publicado en: Data in Brief, Edición 54, 2025, ISSN 2352-3409
Editor: Elsevier BV
DOI: 10.1016/J.DIB.2024.110544

Laserfarm – A high-throughput workflow for generating geospatial data products of ecosystem structure from airborne laser scanning point clouds

Autores: Kissling, W.D.; Shi, Y.; Koma, Z.; Meijer, C.; Ku, O.; Nattino, F.; Seijmonsbergen, A.C.; Grootes, M.W.
Publicado en: Ecological Informatics, Edición v.72, 2022, ISSN 1574-9541
Editor: Elsevier
DOI: 10.1016/J.ECOINF.2022.101836

Diversity and Distributions

Autores: W. Daniel Kissling, Yifang Shi
Publicado en: Diversity and Distributions, Edición v. 29, 2023, ISSN 1366-9516
Editor: Wiley
DOI: 10.1111/ddi.13760

Hierarchical classification of insects with multitask learning and anomaly detection

Autores: Bjerge, Kim; Geissmann, Quentin; Alison, Jamie; Mann, Hjalte M.R.; Høye, Toke Thomas; Dyrmann, Mads; Karstoft, Henrik
Publicado en: Ecological Informatics, Edición v.77, 2023, ISSN 1574-9541
Editor: Elsevier BV
DOI: 10.1016/J.ECOINF.2023.102278

Accurate detection and identification of insects from camera trap images with deep learning

Autores: Kim Bjerge; Jamie Alison; Mads Dyrmann; Carsten Eie Frigaard; Hjalte M. R. Mann; Toke Thomas Høye
Publicado en: PLOS Sustainability and Transformation, 2023, ISSN 2767-3197
Editor: Public Library of Science
DOI: 10.1101/2022.10.25.513484

A deep learning pipeline for time-lapse camera monitoring of insects and their floral environments

Autores: Kim Bjerge, Henrik Karstoft, Hjalte M.R. Mann, Toke T. Høye
Publicado en: Ecological Informatics, Edición 84, 2024, ISSN 1574-9541
Editor: Elsevier BV
DOI: 10.1016/J.ECOINF.2024.102861

Adapting a global plant identification model to detect invasive alien plant species in high-resolution road side images

Autores: Vincent Espitalier, Jean-Christophe Lombardo, Hervé Goëau, Christophe Botella, Toke Thomas Høye, Mads Dyrmann, Pierre Bonnet, Alexis Joly
Publicado en: Ecological Informatics, Edición 89, 2025, ISSN 1574-9541
Editor: Elsevier BV
DOI: 10.1016/J.ECOINF.2025.103129

AI Species Identification Using Image and Sound Recognition for Citizen Science, Collection Management and Biomonitoring: From Training Pipeline to Large-Scale Models

Autores: Laurens Hogeweg, Ni Yan, Django Brunink, Khadija Ezzaki-Chokri, Wilfred Gerritsen, Rita Pucci, Burooj Ghani, Dan Stowell, Vincent Kalkman
Publicado en: Biodiversity Information Science and Standards, Edición 8, 2024, ISSN 2535-0897
Editor: Pensoft Publishers
DOI: 10.3897/BISS.8.136839

A workflow for extracting ungulate trails in wetlands using 3D point clouds obtained from airborne laser scanning

Autores: Jinhu Wang, Perry Cornelissen, W. Daniel Kissling
Publicado en: Frontiers in Remote Sensing, Edición 6, 2025, ISSN 2673-6187
Editor: Frontiers Media SA
DOI: 10.3389/FRSEN.2025.1599128

Performance of Computer Vision Algorithms for Fine‐Grained Classification Using Crowdsourced Insect Images

Autores: Rita Pucci, Vincent J. Kalkman, Dan Stowell
Publicado en: IET Computer Vision, Edición 19, 2025, ISSN 1751-9632
Editor: Institution of Engineering and Technology (IET)
DOI: 10.1049/CVI2.70006

Conference proceedings (7)

Insect Identification in the Wild: The AMI Dataset

Autores: Aditya Jain, Fagner Cunha, Michael James Bunsen, Juan Sebastián Cañas, Léonard Pasi, Nathan Pinoy, Flemming Helsing, JoAnne Russo, Marc Botham, Michael Sabourin, Jonathan Fréchette, Alexandre Anctil, Yacksecari Lopez, Eduardo Navarro, Filonila Perez Pimentel, Ana Cecilia Zamora, José Alejandro Ramirez Silva, Jonathan Gagnon, Tom August, Kim Bjerge, Alba Gomez Segura, Marc Bélisle, Yves Basset, Kent P. McFarland, David Roy, Toke Thomas Høye, Maxim Larrivée, David Rolnick
Publicado en: Lecture Notes in Computer Science, Computer Vision – ECCV 2024, 2024
Editor: Springer Nature Switzerland
DOI: 10.1007/978-3-031-72913-3_4

Synergizing Digital, Biological, and Participatory Sciences for Global Plant Species Identification: Enabling access to a worldwide identification service

Autores: Pierre Bonnet , Antoine A.A. Affouard, Jean-Christophe J.-C. Lombardo , Mathias Chouet , Hugo Gresse , Vanessa Hequet , Remi Palard , Maxime Fromholtz , Vincent Espitalier , Hervé H.G. Goëau , Benjamin Deneu , Christophe Botella , Joaquim Estopinan , Césa
Publicado en: Biodiversity Information Science and Standards, 2023, ISSN 2535-0897
Editor: Pensoft Publishers
DOI: 10.3897/BISS.7.112545

Lecture Notes in Computer Science

Autores: Alexis Joly, Hervé Goëau, Stefan Kahl, Lukáš Picek, Christophe Botella, Diego Marcos, Milan Šulc, Marek Hrúz, Titouan Lorieul, Sara Si Moussi, Maximilien Servajean, Benjamin Kellenberger, Elijah Cole, Andrew Durso, Hervé Glotin, Robert Planqué, Willem-Pie
Publicado en: ECIR 2023 LNCS proceedings, 2023, ISSN 0302-9743
Editor: Springer
DOI: 10.1007/978-3-031-28241-6_65

Overview of GeoLifeCLEF 2023: Species composition prediction with high spatial resolution at continental scale using remote sensing

Autores: Christophe Botella, Benjamin Deneu, Diego Marcos, Maximilien Servajean, Théo Larcher, César Leblanc, Joaquim Estopinan, Pierre Bonnet, Alexis Joly
Publicado en: Working Notes of the Conference and Labs of the Evaluation Forum, 2023, ISSN 1613-0073
Editor: CEUR-WS

Overview of PlantCLEF 2023: Image-based Plant Identification at Global Scale

Autores: Hervé Goëau, Pierre Bonnet, Alexis Joly
Publicado en: Working Notes of the Conference and Labs of the Evaluation Forum, 2023, ISSN 1613-0073
Editor: CEUR-WS

Lecture Notes in Computer Science

Autores: Alexis Joly, Hervé Goëau, Stefan Kahl, Lukáš Picek, Christophe Botella, Diego Marcos, Milan Šulc, Marek Hrúz, Titouan Lorieul, Sara Si Moussi, Maximilien Servajean, Benjamin Kellenberger, Elijah Cole, Andrew Durso, Hervé Glotin, Robert Planqué, Willem-Pie
Publicado en: Experimental IR Meets Multilinguality, Multimodality, and Interaction, 2023, ISSN 0302-9743
Editor: Springer
DOI: 10.1007/978-3-031-42448-9_27

Comparison between transformers and convolutional models for fine-grained classification of insects

Autores: Rita Pucci, Vincent J. Kalkman, Dan Stowell
Publicado en: Workshop Camera Traps, AI and Ecology, 2023
Editor: Computer Vision Group Jena
DOI: 10.48550/arXiv.2307.11112