Linking Infectious disease Front-liners’ control Efforts with central public health authorities in The African Great Lakes Region

Informations projet

GREAT-LIFE

N° de convention de subvention: 101103059

DOI

10.3030/101103059

Date de signature de la CE 13 Juin 2023

Date de début 1 Juillet 2023

Date de fin 30 Juin 2028

Financé au titre de

• Health

Coût total

€ 5 207 500,00

Contribution de l’UE

€ 5 207 500,00

Coordonné par

DANMARKS TEKNISKE UNIVERSITET
Denmark

CORDIS fournit des liens vers les livrables publics et les publications des projets HORIZON.

Les liens vers les livrables et les publications des projets du 7e PC, ainsi que les liens vers certains types de résultats spécifiques tels que les jeux de données et les logiciels, sont récupérés dynamiquement sur OpenAIRE .

Livrables

Documents, reports (2)

Data Management Plan

Initial and updated Data Management Plan to be executed. Reviews and any updates to the DMP will be done in Months 24 and 48.

Collaboration Agreement

Collaboration Agreement between projects

Other (2)

Tailored bioinformatic workflow created

The bioinfomratic workflow to be used in the frontline will be made publicly available on Github

Training in frontline sequencing and bioinformatics

Training conduced for project participants in nanopore sequencing and simple frontline bioinformatics

Publications

Peer reviewed articles (9)

Monkeypox Clade Ib virus introduction into Burundi: first findings, July to mid-August 2024

Auteurs: Néhémie Nzoyikorera, Cassien Nduwimana, Leonard Schuele, David F Nieuwenhuijse, Marion Koopmans, Saria Otani, Frank M Aarestrup, Théogène Ihorimbere, Denis Niyomwungere, Armstrong Ndihokubwayo, Idrissa Diawara, Alexis Niyomwungere, Dionis Nizigiyimana, Marie Noelle Uwineza, Bas B Oude Munnink, Joseph Nyandwi
Publié dans: Eurosurveillance, Numéro 29, 2024, ISSN 1560-7917
Éditeur: European Centre for Disease Control and Prevention (ECDC)
DOI: 10.2807/1560-7917.ES.2024.29.42.2400666

Real-time PCR assay to detect the novel Clade Ib monkeypox virus, September 2023 to May 2024

Auteurs: Leonard Schuele, Leandre Murhula Masirika, Jean Claude Udahemuka, Freddy Belesi Siangoli, Justin Bengehya Mbiribindi, Pacifique Ndishimye, Frank M Aarestrup, Marion Koopmans, Bas B Oude Munnink, Richard Molenkamp, null null
Publié dans: Eurosurveillance, Numéro 29, 2024, ISSN 1560-7917
Éditeur: European Centre for Disease Control and Prevention (ECDC)
DOI: 10.2807/1560-7917.ES.2024.29.32.2400486

Ongoing mpox outbreak in Kamituga, South Kivu province, associated with monkeypox virus of a novel Clade I sub-lineage, Democratic Republic of the Congo, 2024

Auteurs: Leandre Murhula Masirika, Jean Claude Udahemuka, Leonard Schuele, Pacifique Ndishimye, Saria Otani, Justin Bengehya Mbiribindi, Jean M. Marekani, Léandre Mutimbwa Mambo, Nadine Malyamungu Bubala, Marjan Boter, David F. Nieuwenhuijse, Trudie Lang, Ernest Balyahamwabo Kalalizi, Jean Pierre Musabyimana, Frank M. Aarestrup, Marion Koopmans, Bas B. Oude Munnink, Freddy Belesi Siangoli
Publié dans: Eurosurveillance, Numéro 29, 2024, ISSN 1560-7917
Éditeur: European Centre for Disease Control and Prevention (ECDC)
DOI: 10.2807/1560-7917.ES.2024.29.11.2400106

Improved ability to utilize lactose and grow in milk as a potential explanation for emergence of the novel bovine Staphylococcus aureus ST5477

Auteurs: Frank M. Aarestrup, Egon B. Hansen, Happiness H. Kumburu, Tutu Mzee, Saria Otani
Publié dans: International Journal of Medical Microbiology, Numéro 317, 2024, ISSN 1438-4221
Éditeur: Elsevier BV
DOI: 10.1016/j.ijmm.2024.151637

Epidemiological and genomic evolution of the ongoing outbreak of clade Ib mpox virus in the eastern Democratic Republic of the Congo

Auteurs: Leandre Murhula Masirika, Jean Claude Udahemuka, Leonard Schuele, David F. Nieuwenhuijse, Pacifique Ndishimye, Marjan Boter, Justin Bengehya Mbiribindi, Cris Kacita, Trudie Lang, Christian Gortázar, Jean Pierre Musabyimana, Saria Otani, Frank M. Aarestrup, Freddy Belesi Siangoli, Bas B. Oude Munnink, Marion Koopmans
Publié dans: Nature Medicine, 2025, ISSN 1078-8956
Éditeur: Springer Science and Business Media LLC
DOI: 10.1038/S41591-025-03582-1

Prevalence, Etiology, and Treatment of Diarrheal Diseases in Kenya: A Scoping Review

Auteurs: Fredrick Ogumbo, Latifah Benta, Brian Kimutai, Joseph Mugah, Eddy Johnson, Vanessa Onyonyi, Caroline Dande, Lillian Musila, Steve Wandiga
Publié dans: American Journal of Epidemiology and Infectious Disease, Numéro 12, 2024, ISSN 2333-116X
Éditeur: Science and Education Publishing Co., Ltd.
DOI: 10.12691/ajeid-12-4-1

Rift Valley Fever outbreaks in the East African Community: insights from ProMed data (2010–2024)

Auteurs: Pacifique Ndishimye; Pacifique Ndishimye; Pacifique Ndishimye; Therese Umuhoza; Therese Umuhoza; Therese Umuhoza; Brigitte Umutoni; Brigitte Umutoni; Fathiah Zakham; Fathiah Zakham; Matin Ndayambaje; Matin Ndayambaje; Benjamin Hewins; Methode Ngabo Gasana; Ali Toloue Ostadgavahi; Gustavo Sganzerla; Fabrice Ndayisenga; David Kelvin; Jean Claude Udahemuka; Jean Claude Udahemuka; Jean Claude Udahemuka
Publié dans: Frontiers in Public Health, 2024, ISSN 2296-2565
Éditeur: Frontiers
DOI: 10.3389/FPUBH.2024.1298594

Nature Communications

Auteurs: Leandre Murhula Masirika; Luca M. Zaeck; Pacifique Ndishimye; Jean Claude Udahemuka; Saria Otani; Frank M. Aarestrup; Leonard Schuele; Babs E. Verstrepen; Scott Jones; Ashley Otter; Corine H. GeurtsvanKessel; Jean Pierre Musabyimana; Justin Bengehya Mbiribindi; Jules Minega Ndoli; Bas B. Oude Munnink; Freddy Siangoli Belesi; Marion P. G. Koopmans; Rory D. de Vries
Publié dans: Nature Communications, 2025, ISSN 2041-1723
Éditeur: Spring Nature
DOI: 10.1038/S41467-025-62064-7

Metagenomic sequencing of mpox virus clade Ib lesions identifies possible bacterial and viral co-infections in hospitalized patients in eastern DRC

Auteurs: Leonard Schuele; Leandre Murhula Masirika; Hayley Cassidy; Philip T. L. C. Clausen; Luca M. Zaeck; Marjan Boter; Pacifique Ndishimye; Jean Claude Udahemuka; Rory D. de Vries; Saria Otani; Richard Molenkamp; David F. Nieuwenhuijse; Justin Bengehya Mbiribindi; Freddy Belesi Siangoli; Marion Koopmans; Frank M. Aarestrup; Bas B. Oude Munnink
Publié dans: Microbiology Spectrum, 2025, ISSN 2165-0497
Éditeur: ASM Journals
DOI: 10.1128/SPECTRUM.00512-25

Other (1)

Trends and seasonal variation in gastrointestinal infections in Tanzania: Analysis of 5-year DHIS2 data toward implementing the sampling cycles and metagenomic analyses

Auteurs: Gerald Phares Mwing’a; Patrick A. Kimu; Melkiory Beti; Mariana Shayo; Davis Kuchaka; Zaina Mchome; Masoud Mahundi; Claud Kumalija; Calvin Sindato; Tolbert Sonda; Paul E. Kazyoba
Publié dans: IJID Regions, 2025
Éditeur: Science Direct
DOI: 10.1016/J.IJREGI.2025.100661