SWEEPICS: SWEPT LASERS FOR NON-INVASIVE DIAGNOSTICS

Project Information

SWEEPICS

Grant agreement ID: 101135053

DOI

10.3030/101135053

EC signature date 15 November 2023

Start date 1 December 2023

End date 31 August 2027

Funded under

• Digital, Industry and Space

Total cost

No data

EU contribution

€ 4 823 332,90

Coordinated by

UNIVERSITAET zu LUEBECK
Germany

CORDIS provides links to public deliverables and publications of HORIZON projects.

Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Deliverables

Websites, patent fillings, videos etc. (1)

Website

SWEEPICS website online

Publications

Peer reviewed articles (14)

Probe set selection for targeted spatial transcriptomics

Author(s): Louis B. Kuemmerle, Malte D. Luecken, Alexandra B. Firsova, Lisa Barros de Andrade e Sousa, Lena Straßer, Ilhem Isra Mekki, Francesco Campi, Lukas Heumos, Maiia Shulman, Valentina Beliaeva, Soroor Hediyeh-Zadeh, Anna C. Schaar, Krishnaa T. Mahbubani, Alexandros Sountoulidis, Tamás Balassa, Ferenc Kovacs, Peter Horvath, Marie Piraud, Ali Ertürk, Christos Samakovlis, Fabian J. Theis
Published in: Nature Methods, Issue 21, 2025, ISSN 1548-7091
Publisher: Springer Science and Business Media LLC
DOI: 10.1038/S41592-024-02496-Z

Single-cell light-sheet fluorescence 3D images of tumour-stroma spheroid multicultures

Author(s): Akos Diosdi, Filippo Piccinini, Timea Boroczky, Gabriella Dobra, Gastone Castellani, Krisztina Buzas, Peter Horvath, Maria Harmati
Published in: Scientific Data, Issue 12, 2025, ISSN 2052-4463
Publisher: Springer Science and Business Media LLC
DOI: 10.1038/S41597-025-04832-0

Molecular Systems Biology

Author(s): Peter Horvath; Fabian Coscia
Published in: Molecular Systems Biology, 2025, ISSN 1744-4292
Publisher: EMBO Press & Wiley-VCH
DOI: 10.1038/S44320-025-00101-9

Synergistic integration of materials in medical microrobots for advanced imaging and actuation

Author(s): Paul Wrede; Eva Remlova; Yi Chen; Xosé Luís Deán-Ben; Metin Sitti; Daniel Razansky
Published in: Nature Reviews Materials, 2025, ISSN 2058-8437
Publisher: Nature Portfolio
DOI: 10.1038/S41578-025-00811-4

Optics Express

Author(s): Tonio F. Kutscher; Christian Stock; Florian Sommer; Jonas Jurkevicius; Stefan Meyer; Moritz Wiggert; Philipp Lamminger; Sebastian Karpf
Published in: Optics Express, 2025, ISSN 1094-4087
Publisher: Optical Society of America
DOI: 10.1364/OE.541976

SuperCUT, an unsupervised multimodal image registration with deep learning for biomedical microscopy

Author(s): Istvan Grexa, Zsanett Zsófia Iván, Ede Migh, Ferenc Kovács, Hella A Bolck, Xiang Zheng, Andreas Mund, Nikita Moshkov, Vivien Miczán, Krisztian Koos, Peter Horvath
Published in: Briefings in Bioinformatics, Issue 25, 2024, ISSN 1467-5463
Publisher: Oxford University Press (OUP)
DOI: 10.1093/BIB/BBAE029

HCS-3DX, a next-generation AI-driven automated 3D-oid high-content screening system

Author(s): Akos Diosdi, Timea Toth, Maria Harmati, Grexa Istvan, Bálint Schrettner, Nora Hapek, Ferenc Kovacs, Andras Kriston, Krisztina Buzas, Francesco Pampaloni, Filippo Piccinini, Peter Horvath
Published in: Nature Communications, Issue 16, 2025, ISSN 2041-1723
Publisher: Springer Science and Business Media LLC
DOI: 10.1038/S41467-025-63955-5

Learning representations for image-based profiling of perturbations

Author(s): Nikita Moshkov, Michael Bornholdt, Santiago Benoit, Matthew Smith, Claire McQuin, Allen Goodman, Rebecca A. Senft, Yu Han, Mehrtash Babadi, Peter Horvath, Beth A. Cimini, Anne E. Carpenter, Shantanu Singh, Juan C. Caicedo
Published in: Nature Communications, Issue 15, 2024, ISSN 2041-1723
Publisher: Springer Science and Business Media LLC
DOI: 10.1038/S41467-024-45999-1

Spatial proteomics in translational and clinical research

Author(s): Peter Horvath, Fabian Coscia
Published in: Molecular Systems Biology, Issue 21, 2025, ISSN 1744-4292
Publisher: Springer Science and Business Media LLC
DOI: 10.1038/S44320-025-00101-9

Optics Express

Author(s): Tonio F. Kutscher; Christian Stock; Florian Sommer; Jonas Jurkevicius; Stefan Meyer; Moritz Wiggert; Philipp Lamminger; Sebastian Karpf
Published in: Optics Express, 2025, ISSN 1094-4087
Publisher: Optica
DOI: 10.1364/OE.541976

Scientific Reports

Author(s): Sundar, Shruti; Jin, Tian; id_orcid0000-0002-4358-3184; Liu, Yu-Hang; Chen, Zhenyue; Reiss, Michael; Kurnikov, Alexey; Subochev, Pavel; Razansky, Daniel; id_orcid0000-0001-8676-0964
Published in: Scientific Reports, 2025, ISSN 2045-2322
Publisher: Nature Portfolio
DOI: 10.3929/ETHZ-B-000744284

Coordinated Two‐Photon Fluorescence and Optoacoustic Microscopy of Neural, Vascular, and Cellular Dynamics in the Mouse Brain

Author(s): Tian Jin, Shruti Sundar, Yu‐Hang Liu, Chaim Glück, Quanyu Zhou, Zhenyue Chen, Michael Reiss, Lin Tang, Bruno Weber, Daniel Razansky
Published in: Laser & Photonics Reviews, Issue 19, 2025, ISSN 1863-8880
Publisher: Wiley
DOI: 10.1002/LPOR.202500102

Establishment of an imaging-based screening pipeline for the identification of human ribosome biogenesis inhibitors

Author(s): Claudia Gafko, Réka Hollandi, Kerstin Dörner, Matteo Rosellini, Ivo Zemp, Peter Horvath, Ulrike Kutay
Published in: BMC Biology, Issue 23, 2025, ISSN 1741-7007
Publisher: Springer Science and Business Media LLC
DOI: 10.1186/S12915-025-02425-2

Spatial single-cell atlas reveals regional variations in healthy and diseased human lung

Author(s): Alexandra B. Firsova, Sergio Marco Salas, Louis B. Kuemmerle, Xesús M. Abalo, Alexandros Sountoulidis, Ludvig Larsson, Krishnaa T. Mahbubani, Jonas Theelke, Zaneta Andrusivova, Leire Alonso Galicia, Andreas Liontos, Tamás Balassa, Ferenc Kovacs, Peter Horvath, Yuexin Chen, Janine Gote-Schniering, Mircea-Gabriel Stoleriu, Jürgen Behr, Kerstin B. Meyer, Wim Timens, Herbert B. Schiller, Malte D. Luecken, Fabian J. Theis, Joakim Lundeberg, Mats Nilsson, Martijn C. Nawijn, Christos Samakovlis
Published in: Nature Communications, Issue 16, 2025, ISSN 2041-1723
Publisher: Springer Science and Business Media LLC
DOI: 10.1038/S41467-025-65704-0

Conference proceedings (7)

976 nm Swept-Source FDML-MOPA Laser for Multiphoton Microscopy

Author(s): Stefan Meyer, Tonio Kutscher, Kimberley Goodwin, Jan Wenzel, Sebastian Karpf
Published in: 2025 Conference on Lasers and Electro-Optics Europe & European Quantum Electronics Conference (CLEO/Europe-EQEC), 2025
Publisher: IEEE
DOI: 10.1109/CLEO/EUROPE-EQEC65582.2025.11109978

Virtual Histology of Brain Aspirate Using Kilohertz Two-Photon SLIDE Microscopy

Author(s): Gregory Berg, Matthea Thielking, Sebastian Karpf
Published in: European Conferences on Biomedical Optics 2025, 2025
Publisher: Optica Publishing Group
DOI: 10.1364/ECBO.2025.M5C.5

Label Free 775nm SLIDE Autofluorescence Images of NADH and FAD

Author(s): Tonio F. Kutscher, Christian Stock, Florian Sommer, Jonas Jurkevicius, Stefan Meyer, Philipp Lamminger, Stefanie Köhler, Moritz Wiggert, Sebastian ‘Nino’ Karpf
Published in: European Conferences on Biomedical Optics 2025, 2025
Publisher: Optica Publishing Group
DOI: 10.1364/ECBO.2025.M5C.3

Tomographic Flow Cytometry of Organoids using Ultra-Fast 3D Two-Photon SLIDE Microscopy

Author(s): Matthea Thielking, Gregory Berg, Christian Stock, Florian Sommer, Sebastian Karpf
Published in: European Conferences on Biomedical Optics 2025, 2025
Publisher: Optica Publishing Group
DOI: 10.1364/ECBO.2025.M4C.1

SLIDE Multiphoton Microscopy of Green Fluorescent Dyes with 640 frames per second

Author(s): Stefan Meyer, Kimberley Goodwin, Tonio Kutscher, Sebastian Karpf
Published in: European Conferences on Biomedical Optics 2025, 2025
Publisher: Optica Publishing Group
DOI: 10.1364/ECBO.2025.S1A.4

Kilohertz Fluorescence Imaging Flow Cytometry

Author(s): Christian Stock, Matthea Thielking, Sebastian Karpf
Published in: European Conferences on Biomedical Optics 2025, 2025
Publisher: Optica Publishing Group
DOI: 10.1364/ECBO.2025.S4C.2

On Site Brain Tumour Detection Using Flow Histology via High Speed Multiphoton SLIDE Microscopy during Ultrasonic Tissue Dissection

Author(s): Theisen-Kunde Dirk, Thielking Matthea, Berg Gregory, Kren Jessica, E. Neumann Julia, Bonsanto Matteo Mario, Karpf Sebastian
Published in: European Conferences on Biomedical Optics 2025, 2025
Publisher: Optica Publishing Group
DOI: 10.1364/ECBO.2025.TU3A.2