Fast Assay for Pathogen Identification and Characterisation

Resultado final

Clinical advice on relevant targets, samples, patient populations

Clinical advice on relevant targets, samples, patient populations.

Analysis of bacteremia pilot study teport

Analysis of bacteremia pilot study report.

Project handbook

Project handbook.

Sample collection B

Sample collection from known positive environmental samples and prescreen using method.

Randomized and blinded panels

Preparation of randomised and blinded panels for analysis of two extraction methods.

Publicaciones

Extended-spectrum beta-lactamases and plasmid diversity in urinary isolates of Escherichia coli in Croatia: a nation-wide, multicentric, retrospective study

Autores: Marija Krilanović, Maja Tomić-Paradžik, Tomislav Meštrović, Nataša Beader, Zoran Herljević, Rick Conzemius, Ivan Barišić, Jasmina Vraneš, Vesna Elveđi-Gašparović, Branka Bedenić
Publicado en: Folia Microbiologica, Edición 65/4, 2020, Página(s) 649-667, ISSN 0015-5632
Editor: Academy of Sciences of the Czech Republic
DOI: 10.1007/s12223-019-00769-1

Epidemiology of colistin-resistant, carbapenemase-producing Enterobacteriaceae and Acinetobacter baumannii in Croatia

Autores: Valentino D’Onofrio, Rick Conzemius, Dijana Varda-Brkić, Maja Bogdan, Andrea Grisold, Inge C. Gyssens, Branka Bedenić, Ivan Barišić
Publicado en: Infection, Genetics and Evolution, Edición 81, 2020, Página(s) 104263, ISSN 1567-1348
Editor: Elsevier BV
DOI: 10.1016/j.meegid.2020.104263

Audit of empirical antibiotic therapy for sepsis and the effect of multidisciplinary consultation on early antibiotic therapy changes and patient outcomes

Autores: Valentino D’Onofrio, Agnes Meersman, Koen Magerman, Luc Waumans, Karlijn Van Halem, Jeroen Van der Hilst, Reinoud Cartuyvels, Peter Messiaen, Inge C Gyssens
Publicado en: International Journal of Antimicrobial Agents, Edición Submitted, 2021, Página(s) Submitted, ISSN 0000-0000
Editor: Elsevier

In-silico Design of DNA Oligonucleotides: Challenges and Approaches

Autores: Ivan Barisic
Publicado en: Computational and Structural Biotechnology Journal, Vol 17, Iss , Pp 1056-1065 (2019), Edición 1, 2019, Página(s) 1056-1065, ISSN 2001-0370
Editor: Elsevier BV
DOI: 10.1016/j.csbj.2019.07.008

The Clinical Impact of Rapid Molecular Microbiological Diagnostics for Pathogen and Resistance Gene Identification in Patients With Sepsis: A Systematic Review

Autores: Valentino D’Onofrio, Lene Salimans, Branka Bedenić, Reinoud Cartuyvels, Ivan Barišić, Inge C Gyssens
Publicado en: Open Forum Infectious Diseases, Edición 7/10, 2020, ISSN 2328-8957
Editor: Open Forum Infectious Diseases
DOI: 10.1093/ofid/ofaa352

Risk factors for mortality, ICU admission and bacteremia in patients suspected of sepsis at the Emergency department. A prospective cohort study

Autores: Valentino D’Onofrio, Agnes Meersman, Sara Vijgen, Reinoud Cartuyvels, Peter Messiaen, Inge C Gyssens
Publicado en: Open Forum Infectious Diseases, 2020, ISSN 2328-8957
Editor: Oxford academic
DOI: 10.1093/ofid/ofaa594

PRIMEval: Optimization and screening of multiplex oligonucleotide assays

Autores: Rick Conzemius, Michaela Hendling, Stephan Pabinger, Ivan Barišić
Publicado en: Scientific Reports, Edición 9/1, 2019, ISSN 2045-2322
Editor: Nature Publishing Group
DOI: 10.1038/s41598-019-55883-4

Gram-negative bacteria as causative agents of ventilator-associated pneumonia and their respective resistance mechanisms

Autores: Daniela Bandić-Pavlović, Tajana Zah-Bogović, Marta Žižek, Luka Bielen, Vesna Bratić, Pero Hrabač, Domagoj Slačanac, Slobodan Mihaljević, Branka Bedenić
Publicado en: Journal of Chemotherapy, Edición 32/7, 2020, Página(s) 344-358, ISSN 1120-009X
Editor: Maney Publishing
DOI: 10.1080/1120009x.2020.1793594

Emergence of multidrug-resistant Proteus mirabilis in a long-term care facility in Croatia

Autores: Branka Bedenić, Nataša Firis, Vesna Elveđi-Gašparović, Marija Krilanović, Krešimir Matanović, Iva Štimac, Josefa Luxner, Jasmina Vraneš, Tomislav Meštrović, Gernot Zarfel, Andrea Grisold
Publicado en: Wiener klinische Wochenschrift, Edición 128/11-12, 2016, Página(s) 404-413, ISSN 0043-5325
Editor: Springer Verlag
DOI: 10.1007/s00508-016-1005-x

Molecular characterization of class b carbapenemases in advanced stage of dissemination and emergence of class d carbapenemases in Enterobacteriaceae from Croatia

Autores: Branka Bedenić, Sanda Sardelić, Josefa Luxner, Zrinka Bošnjak, Dijana Varda-Brkić, Amarela Lukić-Grlić, Ivana Mareković, Sonja Frančula-Zaninović, Marija Krilanović, Dorotea Šijak, Andrea Grisold, Gernot Zarfel
Publicado en: Infection, Genetics and Evolution, Edición 43, 2016, Página(s) 74-82, ISSN 1567-1348
Editor: Elsevier BV
DOI: 10.1016/j.meegid.2016.05.011

Oli2go: an automated multiplex oligonucleotide design tool

Autores: Michaela Hendling, Stephan Pabinger, Konrad Peters, Noa Wolff, Rick Conzemius, Ivan Barišić
Publicado en: Nucleic Acids Research, Edición 46/W1, 2018, Página(s) W252-W256, ISSN 0305-1048
Editor: Oxford University Press
DOI: 10.1093/nar/gky319

Arrival of carbapenem-hydrolyzing-oxacillinases in Acinetobacter baumannii in Bosnia and Herzegovina

Autores: Tanja Petrović, Selma Uzunović, Ivan Barišić, Josefa Luxner, Andrea Grisold, Gernot Zarfel, Amir Ibrahimagić, Sanja Jakovac, Domagoj Slaćanac, Branka Bedenić
Publicado en: Infection, Genetics and Evolution, Edición 58, 2018, Página(s) 192-198, ISSN 1567-1348
Editor: Elsevier BV
DOI: 10.1016/j.meegid.2017.12.021

Epidemic spread of OXA-48 beta-lactamase in Croatia

Autores: Branka Bedenić, Mia Slade, Lidija Žele Starčević, Sanda Sardelić, Mirna Vranić-Ladavac, Ana Benčić, Vlasta Zujić Atalić, Maja Bogdan, Marina Bubonja-Šonje, Maja Tomić-Paradžik, Tatjana Tot, Amarela Lukić-Grlić, Domagoj Drenjančević, Dijana Varda-Brkić, Daniela Bandić-Pavlović, Slobodan Mihaljević, Gernot Zarfel, Marija Gužvinec, Rick Conzemius, Ivan Barišić, Arjana Tambić-
Publicado en: Journal of Medical Microbiology, Edición 67/8, 2018, Página(s) 1031-1041, ISSN 0022-2615
Editor: Society for General Microbiology
DOI: 10.1099/jmm.0.000777

Boron Doped Diamond as a Low Biofouling Material in Aquatic Environments: Assessment of Pseudomonas aeruginosa Biofilm Formation

Autores: Lee J. Simcox, Rui P. A. Pereira, Elizabeth M. H. Wellington, Julie V. Macpherson
Publicado en: ACS Applied Materials & Interfaces, Edición 11/28, 2019, Página(s) 25024-25033, ISSN 1944-8244
Editor: American Chemical Society
DOI: 10.1021/acsami.9b07245

Differentiating influenza from COVID-19 in patients presenting with suspected sepsis

Autores: Valentino D’Onofrio, Eveline Van Steenkiste, Agnes Meersman, Luc Waumans, Reinoud Cartuyvels, Karlijn Van Halem, Peter Messiaen, Inge C. Gyssens
Publicado en: European Journal of Clinical Microbiology & Infectious Diseases, 2020, ISSN 0934-9723
Editor: Springer Verlag
DOI: 10.1007/s10096-020-04109-x

Resultado final

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