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Fast Assay for Pathogen Identification and Characterisation

Deliverables

Clinical advice on relevant targets, samples, patient populations

Clinical advice on relevant targets, samples, patient populations.

Analysis of bacteremia pilot study teport

Analysis of bacteremia pilot study report.

Project handbook

Project handbook.

Sample collection B

Sample collection from known positive environmental samples and prescreen using method.

Randomized and blinded panels

Preparation of randomised and blinded panels for analysis of two extraction methods.

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Publications

Emergence of multidrug-resistant Proteus mirabilis in a long-term care facility in Croatia

Author(s): Branka Bedenić, Nataša Firis, Vesna Elveđi-Gašparović, Marija Krilanović, Krešimir Matanović, Iva Štimac, Josefa Luxner, Jasmina Vraneš, Tomislav Meštrović, Gernot Zarfel, Andrea Grisold
Published in: Wiener klinische Wochenschrift, Issue 128/11-12, 2016, Page(s) 404-413, ISSN 0043-5325
DOI: 10.1007/s00508-016-1005-x

Molecular characterization of class b carbapenemases in advanced stage of dissemination and emergence of class d carbapenemases in Enterobacteriaceae from Croatia

Author(s): Branka Bedenić, Sanda Sardelić, Josefa Luxner, Zrinka Bošnjak, Dijana Varda-Brkić, Amarela Lukić-Grlić, Ivana Mareković, Sonja Frančula-Zaninović, Marija Krilanović, Dorotea Šijak, Andrea Grisold, Gernot Zarfel
Published in: Infection, Genetics and Evolution, Issue 43, 2016, Page(s) 74-82, ISSN 1567-1348
DOI: 10.1016/j.meegid.2016.05.011

Oli2go: an automated multiplex oligonucleotide design tool

Author(s): Michaela Hendling, Stephan Pabinger, Konrad Peters, Noa Wolff, Rick Conzemius, Ivan Barišić
Published in: Nucleic Acids Research, Issue 46/W1, 2018, Page(s) W252-W256, ISSN 0305-1048
DOI: 10.1093/nar/gky319

Arrival of carbapenem-hydrolyzing-oxacillinases in Acinetobacter baumannii in Bosnia and Herzegovina

Author(s): Tanja Petrović, Selma Uzunović, Ivan Barišić, Josefa Luxner, Andrea Grisold, Gernot Zarfel, Amir Ibrahimagić, Sanja Jakovac, Domagoj Slaćanac, Branka Bedenić
Published in: Infection, Genetics and Evolution, Issue 58, 2018, Page(s) 192-198, ISSN 1567-1348
DOI: 10.1016/j.meegid.2017.12.021

Epidemic spread of OXA-48 beta-lactamase in Croatia

Author(s): Branka Bedenić, Mia Slade, Lidija Žele Starčević, Sanda Sardelić, Mirna Vranić-Ladavac, Ana Benčić, Vlasta Zujić Atalić, Maja Bogdan, Marina Bubonja-Šonje, Maja Tomić-Paradžik, Tatjana Tot, Amarela Lukić-Grlić, Domagoj Drenjančević, Dijana Varda-Brkić, Daniela Bandić-Pavlović, Slobodan Mihaljević, Gernot Zarfel, Marija Gužvinec, Rick Conzemius, Ivan Barišić, Arjana Tambić-
Published in: Journal of Medical Microbiology, Issue 67/8, 2018, Page(s) 1031-1041, ISSN 0022-2615
DOI: 10.1099/jmm.0.000777

Boron Doped Diamond as a Low Biofouling Material in Aquatic Environments: Assessment of Pseudomonas aeruginosa Biofilm Formation

Author(s): Lee J. Simcox, Rui P. A. Pereira, Elizabeth M. H. Wellington, Julie V. Macpherson
Published in: ACS Applied Materials & Interfaces, Issue 11/28, 2019, Page(s) 25024-25033, ISSN 1944-8244
DOI: 10.1021/acsami.9b07245