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The Plasmidome: a Driving Force of Rumen Microbial Evolution from Birth to Adulthood

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Heritable Bovine Rumen Bacteria Are Phylogenetically Related and Correlated with the Cow’s Capacity To Harvest Energy from Its Feed

Author(s): Goor Sasson, Sheerli Kruger Ben-Shabat, Eyal Seroussi, Adi Doron-Faigenboim, Naama Shterzer, Shamay Yaacoby, Margret E. Berg Miller, Bryan A. White, Eran Halperin, Itzhak Mizrahi
Published in: mBio, Issue 8/4, 2017, ISSN 2150-7511
DOI: 10.1128/mBio.00703-17

Insights Into Culturomics of the Rumen Microbiome

Author(s): Tamar Zehavi, Maraike Probst, Itzhak Mizrahi
Published in: Frontiers in Microbiology, Issue 9, 2018, ISSN 1664-302X
DOI: 10.3389/fmicb.2018.01999

Review: The compositional variation of the rumen microbiome and its effect on host performance and methane emission

Author(s): I. Mizrahi, E. Jami
Published in: animal, 2018, Page(s) 1-13, ISSN 1751-7311
DOI: 10.1017/S1751731118001957

Recycler: an algorithm for detecting plasmids from de novo assembly graphs

Author(s): Roye Rozov, Aya Brown Kav, David Bogumil, Naama Shterzer, Eran Halperin, Itzhak Mizrahi, Ron Shamir
Published in: Bioinformatics, 2016, Page(s) btw651, ISSN 1367-4803
DOI: 10.1093/bioinformatics/btw651

Specific microbiome-dependent mechanisms underlie the energy harvest efficiency of ruminants

Author(s): Sheerli Kruger Ben Shabat, Goor Sasson, Adi Doron-Faigenboim, Thomer Durman, Shamay Yaacoby, Margret E Berg Miller, Bryan A White, Naama Shterzer, Itzhak Mizrahi
Published in: The ISME Journal, Issue 10/12, 2016, Page(s) 2958-2972, ISSN 1751-7362
DOI: 10.1038/ismej.2016.62

Assembly of Synthetic Functional Cellulosomal Structures onto the Cell Surface of Lactobacillus plantarum , a Potent Member of the Gut Microbiome

Author(s): Johanna Stern, Sarah Moraïs, Yonit Ben-David, Rachel Salama, Melina Shamshoum, Raphael Lamed, Yuval Shoham, Edward A. Bayer, Itzhak Mizrahi
Published in: Applied and Environmental Microbiology, Issue 84/8, 2018, ISSN 0099-2240
DOI: 10.1128/AEM.00282-18

Microbiome niche modification drives diurnal rumen community assembly, overpowering individual variability and diet effects

Author(s): Yoav Shaani, Tamar Zehavi, Stav Eyal, Joshuah Miron, Itzhak Mizrahi
Published in: The ISME Journal, Issue 12/10, 2018, Page(s) 2446-2457, ISSN 1751-7362
DOI: 10.1038/s41396-018-0203-0

Addressing Global Ruminant Agricultural Challenges Through Understanding the Rumen Microbiome: Past, Present, and Future

Author(s): Sharon A. Huws, Christopher J. Creevey, Linda B. Oyama, Itzhak Mizrahi, Stuart E. Denman, Milka Popova, Rafael Muñoz-Tamayo, Evelyne Forano, Sinead M. Waters, Matthias Hess, Ilma Tapio, Hauke Smidt, Sophie J. Krizsan, David R. Yáñez-Ruiz, Alejandro Belanche, Leluo Guan, Robert J. Gruninger, Tim A. McAllister, C. Jamie Newbold, Rainer Roehe, Richard J. Dewhurst, Tim J. Snelling, Mick Watson, Gar
Published in: Frontiers in Microbiology, Issue 9, 2018, ISSN 1664-302X
DOI: 10.3389/fmicb.2018.02161

Compositional and functional dynamics of the bovine rumen methanogenic community across different developmental stages

Author(s): Nir Friedman, Elie Jami, Itzhak Mizrahi
Published in: Environmental Microbiology, Issue 19/8, 2017, Page(s) 3365-3373, ISSN 1462-2912
DOI: 10.1111/1462-2920.13846

Diet-induced changes of redox potential underlie compositional shifts in the rumen archaeal community

Author(s): Nir Friedman, Eran Shriker, Ben Gold, Thomer Durman, Raphy Zarecki, Eytan Ruppin, Itzhak Mizrahi
Published in: Environmental Microbiology, Issue 19/1, 2017, Page(s) 174-184, ISSN 1462-2912
DOI: 10.1111/1462-2920.13551

Host genetic selection for cold tolerance shapes microbiome composition and modulates its response to temperature

Author(s): Fotini Kokou, Goor Sasson, Tali Nitzan, Adi Doron-Faigenboim, Sheenan Harpaz, Avner Cnaani, Itzhak Mizrahi
Published in: eLife, Issue 7, 2018, ISSN 2050-084X
DOI: 10.7554/eLife.36398

The Road Not Taken: The Rumen Microbiome, Functional Groups, and Community States

Author(s): Sarah Moraïs, Itzhak Mizrahi
Published in: Trends in Microbiology, 2019, ISSN 0966-842X
DOI: 10.1016/j.tim.2018.12.011