Skip to main content

SIngle Molecule DEtection and Quantification (SIMDEQ): A new platform for genetic and epigenetic analysis

Objective

The purpose of the proposed project is to investigate the commercialisation potential of an innovative technology that has been developed in my lab with ERC funding. For over 15 years, our laboratory at the Ecole Normale Supérieure of the Centre Nationale de la Recherche Scientifique (CNRS) has been developing an instrument called a ‘magnetic trap’. Initially developed in order to study the mechanisms of DNA replication and repair, we have discovered in the past few years that this instrument can also be used to extract both genetic and epigenetic information from single molecules of DNA. The highly novel approach we have developed is called SIMDEQTM (short for ‘SIngle-molecule Magnetic DEtection and Quantification’). We have shown that it can be used to rapidly identify, map, quantify, and fully sequence DNA fragments present in a genetic sample. In addition, a unique feature of the technology is that it can detect and locate the naturally-occurring biochemical modifications to DNA’s four bases (e.g. methylation). There is substantial commercial interest in reading these ‘epigenetic’ modifications as they are important in areas such as developmental biology, cancer, and microbial virulence.
The SIMDEQTM approach to genetic analysis is simple, elegant, and combines the DNA mapping and sequencing abilities of current instruments with the revolutionary ability to directly detect a wide range of DNA modifications at single base resolution. We believe SIMDEQTM could be a disruptive technology across a wide range of research and diagnostics sectors, but recognize that this is a dynamic field with many competitors and specialized niches. We therefore hope to investigate the market potential of this technology and identify the most promising applications through the work described in this proposal.

Field of science

  • /social sciences/economics and business/business and management/commerce
  • /natural sciences/biological sciences/developmental biology
  • /medical and health sciences/clinical medicine/oncology/cancer

Call for proposal

ERC-2014-PoC
See other projects for this call

Funding Scheme

ERC-POC - Proof of Concept Grant

Host institution

CENTRE NATIONAL DE LA RECHERCHE SCIENTIFIQUE CNRS
Address
Rue Michel Ange 3
75794 Paris
France
Activity type
Research Organisations
EU contribution
€ 148 500

Beneficiaries (1)

CENTRE NATIONAL DE LA RECHERCHE SCIENTIFIQUE CNRS
France
EU contribution
€ 148 500
Address
Rue Michel Ange 3
75794 Paris
Activity type
Research Organisations