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Formation and Characterization of Protein Post-Translational Modifications and Assessment of Cellular Responses by Application of Metals in Biological Systems

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SuperQuant-assisted comparative proteome analysis of glioblastoma subpopulations allows for identification of potential novel therapeutic targets and cell markers

Author(s): Thiago Verano-Braga, Vladimir Gorshkov, Sune Munthe, Mia D. Sørensen, Bjarne W. Kristensen, Frank Kjeldsen
Published in: Oncotarget, Issue 9/10, 2018, ISSN 1949-2553
DOI: 10.18632/oncotarget.24321

Comparative proteomics as a tool for identifying specific alterations within interferon response pathways in human glioblastoma multiforme cells

Author(s): Irina A Tarasova, Alesya V Tereshkova, Anna A Lobas, Elizaveta M Solovyeva, Alena S Sidorenko, Vladimir Gorshkov, Frank Kjeldsen, Julia A Bubis, Mark V Ivanov, Irina Y Ilina, Sergei A Moshkovskii, Peter M Chumakov, Mikhail V Gorshkov
Published in: Oncotarget, Issue 9/2, 2018, ISSN 1949-2553
DOI: 10.18632/oncotarget.22751

Peptide de novo sequencing of mixture tandem mass spectra

Published in: ISSN 1615-9853
DOI: 10.1002/pmic.201500549

Co-exposure to silver nanoparticles and cadmium induce metabolic adaptation in HepG2 cells

Author(s): Renata Rank Miranda, Vladimir Gorshkov, Barbara Korzeniowska, Stefan J. Kempf, Francisco Filipak Neto, Frank Kjeldsen
Published in: Nanotoxicology, Issue 12/7, 2018, Page(s) 781-795, ISSN 1743-5390
DOI: 10.1080/17435390.2018.1489987

Toxicological interactions of silver nanoparticles and non-essential metals in human hepatocarcinoma cell line

Author(s): Renata Rank Miranda, Arandi Ginane Bezerra Jr, Ciro Alberto Oliveira Ribeiro, Marco Antônio Ferreira Randi, Carmen Lúcia Voigt, Lilian Skytte, Kaare Lund Rasmussen, Frank Kjeldsen, Francisco Filipak Neto
Published in: Toxicology in Vitro, Issue 40, 2017, Page(s) 134-143, ISSN 0887-2333
DOI: 10.1016/j.tiv.2017.01.003

Assessment of protein extraction and digestion efficiency of well-established shotgun protocols for heart proteomics

Author(s): Lucas Rodrigues-Ribeiro, Marcella Nunes Melo-Braga, Frank Kjeldsen, Diana Paola Gómez-Mendoza, Thiago Verano-Braga
Published in: Analytical Biochemistry, Issue 578, 2019, Page(s) 51-59, ISSN 0003-2697
DOI: 10.1016/j.ab.2019.05.006

Ocular penetration of fluorometholone-loaded PEG-PLGA nanoparticles functionalized with cell-penetrating peptides

Author(s): Roberto Gonzalez-Pizarro, Graziella Parrotta, Rodrigo Vera, Elena Sánchez-López, Ruth Galindo, Frank Kjeldsen, Josefa Badia, Laura Baldoma, Marta Espina, María L García
Published in: Nanomedicine, Issue 14/23, 2019, Page(s) 3089-3104, ISSN 1743-5889
DOI: 10.2217/nnm-2019-0201

DirectMS1: MS/MS-Free Identification of 1000 Proteins of Cellular Proteomes in 5 Minutes

Author(s): Mark V. Ivanov, Julia A. Bubis, Vladimir Gorshkov, Irina A. Tarasova, Lev I. Levitsky, Anna A. Lobas, Elizaveta M. Solovyeva, Marina L. Pridatchenko, Frank Kjeldsen, Mikhail V. Gorshkov
Published in: Analytical Chemistry, 2020, ISSN 0003-2700
DOI: 10.1021/acs.analchem.9b05095

Silver nanoparticle-induced expression of proteins related to oxidative stress and neurodegeneration in an in vitro human blood-brain barrier model

Author(s): Asif Manzoor Khan, Barbara Korzeniowska, Vladimir Gorshkov, Muhammad Tahir, Henrik Schrøder, Lilian Skytte, Kaare Lund Rasmussen, Surabhi Khandige, Jakob Møller-Jensen, Frank Kjeldsen
Published in: Nanotoxicology, Issue 13/2, 2019, Page(s) 221-239, ISSN 1743-5390
DOI: 10.1080/17435390.2018.1540728

Protein corona formed on silver nanoparticles in blood plasma is highly selective and resistant to physicochemical changes of the solution

Author(s): Vladimir Gorshkov, Julia A. Bubis, Elizaveta M. Solovyeva, Mikhail V. Gorshkov, Frank Kjeldsen
Published in: Environmental Science: Nano, Issue 6/4, 2019, Page(s) 1089-1098, ISSN 2051-8153
DOI: 10.1039/c8en01054d

Angiotensin-(1-7) oral treatment after experimental myocardial infarction leads to downregulation of CXCR4

Author(s): Diana Paola Gómez-Mendoza, Fúlvia Dias Marques, Marcella Nunes Melo-Braga, Richard R. Sprenger, Rubén Dario Sinisterra, Frank Kjeldsen, Robson Augusto Santos, Thiago Verano-Braga
Published in: Journal of Proteomics, Issue 208, 2019, Page(s) 103486, ISSN 1874-3919
DOI: 10.1016/j.jprot.2019.103486

Fast and Robust Proteome Screening Platform Identifies Neutrophil Extracellular Trap Formation in the Lung in Response to Cobalt Ferrite Nanoparticles

Author(s): Anja M. Billing, Kristina B. Knudsen, Andrew J. Chetwynd, Laura-Jayne A. Ellis, Selina V.Y. Tang, Trine Berthing, Håkan Wallin, Iseult Lynch, Ulla Vogel, Frank Kjeldsen
Published in: ACS Nano, 2020, ISSN 1936-0851
DOI: 10.1021/acsnano.9b08818

Rpn4 and proteasome-mediated yeast resistance to ethanol includes regulation of autophagy

Author(s): Julia A. Bubis, Daria S. Spasskaya, Vladimir A. Gorshkov, Frank Kjeldsen, Aleksandra M. Kofanova, Dmitry S. Lekanov, Mikhail V. Gorshkov, Vadim L. Karpov, Irina A. Tarasova, Dmitry S. Karpov
Published in: Applied Microbiology and Biotechnology, 2020, ISSN 0175-7598
DOI: 10.1007/s00253-020-10518-x