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Identification and analysis of novel mitochondrial proteins encoded by small open reading frames

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Publications

Quantitative high-confidence human mitochondrial proteome and its dynamics in cellular context

Author(s): Marcel Morgenstern, Christian D. Peikert, Philipp Lübbert, Ida Suppanz, Cinzia Klemm, Oliver Alka, Conny Steiert, Nataliia Naumenko, Alexander Schendzielorz, Laura Melchionda, Wignand W.D. Mühlhäuser, Bettina Knapp, Jakob D. Busch, Sebastian B. Stiller, Stefan Dannenmaier, Caroline Lindau, Mariya Licheva, Christopher Eickhorst, Riccardo Galbusera, Ralf M. Zerbes, Michael T. Ryan, Claudine Kraft
Published in: Cell Metabolism, 2021, ISSN 1550-4131
Publisher: Cell Press
DOI: 10.1016/j.cmet.2021.11.001

Definition of a High-Confidence Mitochondrial Proteome at Quantitative Scale

Author(s): Marcel Morgenstern, Sebastian B. Stiller, Philipp Lübbert, Christian D. Peikert, Stefan Dannenmaier, Friedel Drepper, Uri Weill, Philipp Höß, Reinhild Feuerstein, Michael Gebert, Maria Bohnert, Martin van der Laan, Maya Schuldiner, Conny Schütze, Silke Oeljeklaus, Nikolaus Pfanner, Nils Wiedemann, Bettina Warscheid
Published in: Cell Reports, 19/13, 2017, Page(s) 2836-2852, ISSN 2211-1247
Publisher: Cell Press
DOI: 10.1016/j.celrep.2017.06.014

Charting organellar importomes by quantitative mass spectrometry

Author(s): Christian D. Peikert, Jan Mani, Marcel Morgenstern, Sandro Käser, Bettina Knapp, Christoph Wenger, Anke Harsman, Silke Oeljeklaus, André Schneider, Bettina Warscheid
Published in: Nature Communications, 8, 2017, Page(s) 15272, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/ncomms15272

Metabolic profiling of isolated mitochondria and cytoplasm reveals compartment-specific metabolic responses

Author(s): Daqiang Pan, Caroline Lindau, Simon Lagies, Nils Wiedemann, Bernd Kammerer
Published in: Metabolomics, 14/5, 2018, ISSN 1573-3882
Publisher: Springer Verlag
DOI: 10.1007/s11306-018-1352-x

Membrane protein insertion through a mitochondrial β-barrel gate

Author(s): Alexandra I. C. Höhr, Caroline Lindau, Christophe Wirth, Jian Qiu, David A. Stroud, Stephan Kutik, Bernard Guiard, Carola Hunte, Thomas Becker, Nikolaus Pfanner, Nils Wiedemann
Published in: Science, 359/6373, 2018, Page(s) eaah6834, ISSN 0036-8075
Publisher: American Association for the Advancement of Science
DOI: 10.1126/science.aah6834

Identification of new channels by systematic analysis of the mitochondrial outer membrane

Author(s): Vivien Krüger, Thomas Becker, Lars Becker, Malayko Montilla-Martinez, Lars Ellenrieder, F.-Nora Vögtle, Helmut E. Meyer, Michael T. Ryan, Nils Wiedemann, Bettina Warscheid, Nikolaus Pfanner, Richard Wagner, Chris Meisinger
Published in: The Journal of Cell Biology, 216/11, 2017, Page(s) 3485-3495, ISSN 0021-9525
Publisher: Rockefeller University Press
DOI: 10.1083/jcb.201706043

Respiratory chain supercomplexes associate with the cysteine desulfurase complex of the iron–sulfur cluster assembly machinery

Author(s): Lena Böttinger, Christoph U. Mårtensson, Jiyao Song, Nicole Zufall, Nils Wiedemann, Thomas Becker
Published in: Molecular Biology of the Cell, 29/7, 2018, Page(s) 776-785, ISSN 1059-1524
Publisher: American Society for Cell Biology
DOI: 10.1091/mbc.E17-09-0555

INA complex liaises the F1Fo-ATP synthase membrane motor modules

Author(s): Nataliia Naumenko, Marcel Morgenstern, Robert Rucktäschel, Bettina Warscheid, Peter Rehling
Published in: Nature Communications, 8/1, 2017, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-017-01437-z

tRNAs and proteins use the same import channel for translocation across the mitochondrial outer membrane of trypanosomes

Author(s): Moritz Niemann, Anke Harsman, Jan Mani, Christian D. Peikert, Silke Oeljeklaus, Bettina Warscheid, Richard Wagner, André Schneider
Published in: Proceedings of the National Academy of Sciences, 114/37, 2017, Page(s) E7679-E7687, ISSN 0027-8424
Publisher: National Academy of Sciences
DOI: 10.1073/pnas.1711430114

Quantitative proteomics identifies redox switches for global translation modulation by mitochondrially produced reactive oxygen species

Author(s): Ulrike Topf, Ida Suppanz, Lukasz Samluk, Lidia Wrobel, Alexander Böser, Paulina Sakowska, Bettina Knapp, Martyna K. Pietrzyk, Agnieszka Chacinska, Bettina Warscheid
Published in: Nature Communications, 9/1, 2018, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-017-02694-8

The mitochondrial TMEM177 associates with COX20 during COX2 biogenesis

Author(s): Isotta Lorenzi, Silke Oeljeklaus, Abhishek Aich, Christin Ronsör, Sylvie Callegari, Jan Dudek, Bettina Warscheid, Sven Dennerlein, Peter Rehling
Published in: Biochimica et Biophysica Acta (BBA) - Molecular Cell Research, 1865/2, 2018, Page(s) 323-333, ISSN 0167-4889
Publisher: Elsevier BV
DOI: 10.1016/j.bbamcr.2017.11.010

Structural Basis of Membrane Protein Chaperoning through the Mitochondrial Intermembrane Space

Author(s): Katharina Weinhäupl, Caroline Lindau, Audrey Hessel, Yong Wang, Conny Schütze, Tobias Jores, Laura Melchionda, Birgit Schönfisch, Hubert Kalbacher, Beate Bersch, Doron Rapaport, Martha Brennich, Kresten Lindorff-Larsen, Nils Wiedemann, Paul Schanda
Published in: Cell, 175/5, 2018, Page(s) 1365-1379.e25, ISSN 0092-8674
Publisher: Cell Press
DOI: 10.1016/j.cell.2018.10.039

Complete Native Stable Isotope Labeling by Amino Acids of Saccharomyces cerevisiae for Global Proteomic Analysis

Author(s): Stefan Dannenmaier, Sebastian B. Stiller, Marcel Morgenstern, Philipp Lübbert, Silke Oeljeklaus, Nils Wiedemann, Bettina Warscheid
Published in: Analytical Chemistry, 90/17, 2018, Page(s) 10501-10509, ISSN 0003-2700
Publisher: American Chemical Society
DOI: 10.1021/acs.analchem.8b02557

Separating mitochondrial protein assembly and endoplasmic reticulum tethering by selective coupling of Mdm10

Author(s): Lars Ellenrieder, Łukasz Opaliński, Lars Becker, Vivien Krüger, Oliver Mirus, Sebastian P. Straub, Katharina Ebell, Nadine Flinner, Sebastian B. Stiller, Bernard Guiard, Chris Meisinger, Nils Wiedemann, Enrico Schleiff, Richard Wagner, Nikolaus Pfanner, Thomas Becker
Published in: Nature Communications, 7, 2016, Page(s) 13021, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/ncomms13021

Dynamic organization of the mitochondrial protein import machinery

Author(s): Sebastian P. Straub, Sebastian B. Stiller, Nils Wiedemann, Nikolaus Pfanner
Published in: Biological Chemistry, 397/11, 2016, ISSN 1431-6730
Publisher: Walter de Gruyter GmbH & Co. KG
DOI: 10.1515/hsz-2016-0145

Mitochondrial Machineries for Protein Import and Assembly

Author(s): Nils Wiedemann, Nikolaus Pfanner
Published in: Annual Review of Biochemistry, 86/1, 2016, ISSN 0066-4154
Publisher: Annual Reviews, Inc.
DOI: 10.1146/annurev-biochem-060815-014352

Heat Stress-Induced Metabolic Remodeling in Saccharomyces cerevisiae

Author(s): Daqiang Pan, Nils Wiedemann, Bernd Kammerer
Published in: Metabolites, 9/11, 2019, Page(s) 266, ISSN 2218-1989
Publisher: Springer
DOI: 10.3390/metabo9110266

The mitochondrial carrier pathway transports non-canonical substrates with an odd number of transmembrane segments

Author(s): Heike Rampelt, Iva Sucec, Beate Bersch, Patrick Horten, Inge Perschil, Jean-Claude Martinou, Martin van der Laan, Nils Wiedemann, Paul Schanda, Nikolaus Pfanner
Published in: BMC Biology, 18/1, 2020, ISSN 1741-7007
Publisher: BioMed Central
DOI: 10.1186/s12915-019-0733-6

Mitochondrial proteins: from biogenesis to functional networks

Author(s): Nikolaus Pfanner, Bettina Warscheid, Nils Wiedemann
Published in: Nature Reviews Molecular Cell Biology, 20/5, 2019, Page(s) 267-284, ISSN 1471-0072
Publisher: Nature Publishing Group
DOI: 10.1038/s41580-018-0092-0

The mitochondrial transporter SLC25A25 links ciliary TRPP2 signaling and cellular metabolism

Author(s): Alexis Hofherr, Claudia Seger, Fiona Fitzpatrick, Tilman Busch, Elisabeth Michel, Jingting Luan, Lea Osterried, Frieder Linden, Albrecht Kramer-Zucker, Barbara Wakimoto, Conny Schütze, Nils Wiedemann, Anna Artati, Jerzy Adamski, Gerd Walz, Edmund R. S. Kunji, Craig Montell, Terry Watnick, Michael Köttgen
Published in: PLOS Biology, 16/8, 2018, Page(s) e2005651, ISSN 1545-7885
Publisher: PLOS
DOI: 10.1371/journal.pbio.2005651

Mitochondrial OXA Translocase Plays a Major Role in Biogenesis of Inner-Membrane Proteins

Author(s): Sebastian B. Stiller, Jan Höpker, Silke Oeljeklaus, Conny Schütze, Sandra G. Schrempp, Jens Vent-Schmidt, Susanne E. Horvath, Ann E. Frazier, Natalia Gebert, Martin van der Laan, Maria Bohnert, Bettina Warscheid, Nikolaus Pfanner, Nils Wiedemann
Published in: Cell Metabolism, 23/5, 2016, Page(s) 901-908, ISSN 1550-4131
Publisher: Cell Press
DOI: 10.1016/j.cmet.2016.04.005

One library to make them all: streamlining the creation of yeast libraries via a SWAp-Tag strategy

Author(s): Ido Yofe, Uri Weill, Matthias Meurer, Silvia Chuartzman, Einat Zalckvar, Omer Goldman, Shifra Ben-Dor, Conny Schütze, Nils Wiedemann, Michael Knop, Anton Khmelinskii, Maya Schuldiner
Published in: Nature Methods, 13/4, 2016, Page(s) 371-378, ISSN 1548-7091
Publisher: Nature Publishing Group
DOI: 10.1038/nmeth.3795