Microorganisms in Warming Arctic Environments

Livrables

Understanding of organism response to warming in lab based experiments
Bioinformatics workflow for biotechnology screening
Identification for process-based indicators of C flux changes
Understanding of interactions between organisms and chemicals
Identification of threatened species in the Arctic
Improved conceptual model of chemistry/microbe interactions
Drug discovery-bio-prospecting
Conceptual model of cellular response to warming
Risk assessment pathogenic microbes
Screening anti-microbial compounds
Draft Periodic Report (for the purpose of the meeting)

Draft Periodic Report (for the purpose of the meeting) submitted to the REA

Isolated microbial cultures from Arctic habitats
Information on nutrients inputs to different Arctic habitats
Microbial diversity changes on long-time scale
Recruitment

A report detailing how positions were advertised and candidates were selected will be provided as well as a breakdown of the backgrounds and gender of the recruited researchers.

Mineralogy/weathering index information on long-time scale
Understanding of Paleo-Carbon dynamics

Understanding of Paleo-Carbon dynamics

A microbial biogeography map of the Arctic
Development of a unified non-PCR biased approach for Arctic studies
Progress report

Progress report submitted to the REA

Dedicated website for the consortium

Supervisory board of the network
Outreach – press releases, public lectures
Participation in conferences and paper writing
Mid-term review meeting

Mid-term review meeting Consortium/REA

Data management plan

Publications

Inhibition of anaerobic digestion processes: Applications of molecular tools

Auteurs: Yamrot M. Amha, Muhammad Zohaib Anwar, Andrew Brower, Carsten S. Jacobsen, Lauren B. Stadler, Tara M. Webster, Adam L. Smith
Publié dans: Bioresource Technology, Numéro 247, 2018, Page(s) 999-1014, ISSN 0960-8524
Éditeur: Elsevier BV
DOI: 10.1016/j.biortech.2017.08.210

Ice algal bloom development on the surface of the Greenland Ice Sheet

Auteurs: C J Williamson, A M Anesio, J Cook, A Tedstone, E Poniecka, A Holland, D Fagan, M Tranter, M L Yallop
Publié dans: FEMS Microbiology Ecology, Numéro 94/3, 2018, ISSN 1574-6941
Éditeur: Oxford University Press
DOI: 10.1093/femsec/fiy025

Characterisation of Arctic Bacterial Communities in the Air above Svalbard

Auteurs: Lewis Cuthbertson, Herminia Amores-Arrocha, Lucie Malard, Nora Els, Birgit Sattler, David Pearce
Publié dans: Biology, Numéro 6/4, 2017, Page(s) 29, ISSN 2079-7737
Éditeur: MDPI
DOI: 10.3390/biology6020029

Alpine soil microbial ecology in a changing world

Auteurs: Johanna Donhauser, Beat Frey
Publié dans: FEMS Microbiology Ecology, Numéro 94/9, 2018, ISSN 1574-6941
Éditeur: Oxford University Press
DOI: 10.1093/femsec/fiy099

Metagenomic insights into diazotrophic communities across Arctic glacier forefields

Auteurs: Maisie V Nash, Alexandre M Anesio, Gary Barker, Martyn Tranter, Gilda Varliero, Emiley A Eloe-Fadrosh, Torben Nielsen, Thomas Turpin-Jelfs, Liane G Benning, Patricia Sánchez-Baracaldo
Publié dans: FEMS Microbiology Ecology, Numéro 94/9, 2018, ISSN 1574-6941
Éditeur: Oxford University Press
DOI: 10.1093/femsec/fiy114

Linkages between geochemistry and microbiology in a proglacial terrain in the High Arctic

Auteurs: Robin Wojcik, Johanna Donhauser, Beat Frey, Stine Holm, Alexandra Holland, Alexandre M. Anesio, David A. Pearce, Lucie Malard, Dirk Wagner, Liane G. Benning
Publié dans: Annals of Glaciology, 2019, Page(s) 1-16, ISSN 0260-3055
Éditeur: International Glaciological Society
DOI: 10.1017/aog.2019.1

Beyond the planetary boundary layer: Bacterial and fungal vertical biogeography at Mount Sonnblick, Austria

Auteurs: Nora Els, Kathrin Baumann-Stanzer, Catherine Larose, Timothy M. Vogel, Birgit Sattler
Publié dans: Geo: Geography and Environment, Numéro 6/1, 2019, Page(s) e00069, ISSN 2054-4049
Éditeur: Wiley Open Access
DOI: 10.1002/geo2.69

Land cover and landform-based upscaling of soil organic carbon stocks on the Brøgger Peninsula, Svalbard

Auteurs: Robin Wojcik, Juri Palmtag, Gustaf Hugelius, Niels Weiss, Peter Kuhry
Publié dans: Arctic, Antarctic, and Alpine Research, Numéro 51/1, 2019, Page(s) 40-57, ISSN 1523-0430
Éditeur: University of Colorado
DOI: 10.1080/15230430.2019.1570784

Darkening of the Greenland Ice Sheet: Fungal Abundance and Diversity Are Associated With Algal Bloom

Auteurs: Perini, Laura; Gostincar, Cene; Anesio, Alexandre, Magno; Williamson, Christopher; Tranter, Martyn; Gunde-Cimerman, Nina
Publié dans: Frontiers in Microbiology, Numéro 1, 2019, Page(s) Volume 10 | Article 557, ISSN 1664-302X
Éditeur: Frontiers Media
DOI: 10.3389/fmicb.2019.00557

Spatial Variability of Antarctic Surface Snow Bacterial Communities

Auteurs: Lucie A. Malard, Marie Šabacká, Iordanis Magiopoulos, Matt Mowlem, Andy Hodson, Martyn Tranter, Martin J. Siegert, David A. Pearce
Publié dans: Frontiers in Microbiology, Numéro 10, 2019, ISSN 1664-302X
Éditeur: Frontiers Media
DOI: 10.3389/fmicb.2019.00461

Bacterial Dynamics in Supraglacial Habitats of the Greenland Ice Sheet

Auteurs: Nicholes, Miranda Jane; Williamson, Christopher James; Tranter, Martyn; Holland, Alexandra; Poniecka, Ewa; Yallop, Marian Louise; The Black & Bloom Group; Anesio, Alexandre
Publié dans: Frontiers in Microbiology, Numéro 1, 2019, ISSN 1664-302X
Éditeur: Frontiers Media
DOI: 10.3389/fmicb.2019.01366

Dissolved organic nutrients dominate melting surface ice of the Dark Zone (Greenland Ice Sheet)

Auteurs: Alexandra T. Holland, Christopher J. Williamson, Fotis Sgouridis, Andrew J. Tedstone, Jenine McCutcheon, Joseph M. Cook, Ewa Poniecka, Marian L. Yallop, Martyn Tranter, Alexandre M. Anesio
Publié dans: Biogeosciences, Numéro 16/16, 2019, Page(s) 3283-3296, ISSN 1726-4189
Éditeur: European Geosciences Union
DOI: 10.5194/bg-16-3283-2019

Biogeographical patterns in soil bacterial communities across the Arctic region

Auteurs: Lucie A Malard, Muhammad Z Anwar, Carsten S Jacobsen, David A Pearce
Publié dans: FEMS Microbiology Ecology, Numéro 95/9, 2019, Page(s) Volume 95, Numéro 9, ISSN 1574-6941
Éditeur: Oxford University Press
DOI: 10.1093/femsec/fiz128

Microbial composition in seasonal time series of free tropospheric air and precipitation reveals community separation

Auteurs: Nora Els, Catherine Larose, Kathrin Baumann-Stanzer, Romie Tignat-Perrier, Christoph Keuschnig, Timothy M. Vogel, Birgit Sattler
Publié dans: Aerobiologia, 2019, Page(s) 1-31, ISSN 0393-5965
Éditeur: Pergamon Press Ltd.
DOI: 10.1007/s10453-019-09606-x

High-throughput sequencing of fungal communities across the perennial ice block of Scărișoara Ice Cave

Auteurs: Antonio Mondini, Johanna Donhauser, Corina Itcus, Constantin Marin, Aurel Perșoiu, Paris Lavin, Beat Frey, Cristina Purcarea
Publié dans: Annals of Glaciology, Numéro 59/77, 2018, Page(s) 134-146, ISSN 0260-3055
Éditeur: International Glaciological Society
DOI: 10.1017/aog.2019.6

To assemble or not to resemble—A validated Comparative Metatranscriptomics Workflow (CoMW)

Auteurs: Muhammad Zohaib Anwar, Anders Lanzen, Toke Bang-Andreasen, Carsten Suhr Jacobsen
Publié dans: GigaScience, Numéro 8/8, 2019, ISSN 2047-217X
Éditeur: Oxford University Press Giga Science
DOI: 10.1093/gigascience/giz096

The microbiome of glaciers and ice sheets

Auteurs: Alexandre M. Anesio, Stefanie Lutz, Nathan A. M. Chrismas, Liane G. Benning
Publié dans: npj Biofilms and Microbiomes, Numéro 3/1, 2017, ISSN 2055-5008
Éditeur: Nature Partner Journals - Nature Springer
DOI: 10.1038/s41522-017-0019-0

Assessment of Artificial and Natural Transport Mechanisms of Ice Nucleating Particles in an Alpine Ski Resort in Obergurgl, Austria

Auteurs: Philipp Baloh, Nora Els, Robert O. David, Catherine Larose, Karin Whitmore, Birgit Sattler, Hinrich Grothe
Publié dans: Frontiers in Microbiology, Numéro 10, 2019, ISSN 1664-302X
Éditeur: Frontiers Media
DOI: 10.3389/fmicb.2019.02278

Do Organic Substrates Drive Microbial Community Interactions in Arctic Snow?

Auteurs: Benoît Bergk Pinto, Lorrie Maccario, Aurélien Dommergue, Timothy M. Vogel, Catherine Larose
Publié dans: Frontiers in Microbiology, Numéro 10, 2019, ISSN 1664-302X
Éditeur: Frontiers Media
DOI: 10.3389/fmicb.2019.02492

Entirely Off-Grid and Solar-Powered DNA Sequencing of Microbial Communities during an Ice Cap Traverse Expedition

Auteurs: Glen-Oliver. F. Gowers, Oliver Vince, John-Henry Charles, Ingeborg Klarenberg, Tom Ellis, Arwyn Edwards
Publié dans: Genes, Numéro 10/11, 2019, Page(s) 902, ISSN 2073-4425
Éditeur: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/genes10110902

Phenotypes Associated with Pathogenicity: Their Expression in Arctic Fungal Isolates

Auteurs: Laura Perini, Diana C. Mogrovejo, Rok Tomazin, Cene Gostinčar, Florian H. H. Brill, Nina Gunde-Cimerman
Publié dans: Microorganisms, Numéro 7/12, 2019, Page(s) 600, ISSN 2076-2607
Éditeur: MDPI
DOI: 10.3390/microorganisms7120600

Complete Genome and Plasmid Sequences of Salmonella enterica subsp. enterica Serovar Enteritidis PT1, Obtained from the Salmonella Reference Laboratory at Public Health England, Colindale, United Kingdom

Auteurs: Muhammad Zohaib Anwar, Athanasios Zervas, Lars Hestbjerg Hansen, Gary Barker, Alexandre Magno Anesio, Carsten Suhr Jacobsen
Publié dans: Microbiology Resource Announcements, Numéro 9/2, 2020, ISSN 2576-098X
Éditeur: American Society for Microbiology
DOI: 10.1128/MRA.01064-19

Fungal and bacterial diversity of Svalbard subglacial ice

Auteurs: L. Perini, C. Gostinčar, N. Gunde-Cimerman
Publié dans: Scientific Reports, Numéro 9/1, 2019, ISSN 2045-2322
Éditeur: Nature Publishing Group
DOI: 10.1038/s41598-019-56290-5

Potentially pathogenic bacteria isolated from diverse habitats in Spitsbergen, Svalbard

Auteurs: Diana C. Mogrovejo-Arias, Florian H. H. Brill, Dirk Wagner
Publié dans: Environmental Earth Sciences, Numéro 79/5, 2020, ISSN 1866-6280
Éditeur: Springer Verlag
DOI: 10.1007/s12665-020-8853-4

Microbial diversity and biogeography in Arctic soils

Auteurs: Lucie A. Malard, David A. Pearce
Publié dans: Environmental Microbiology Reports, Numéro 10/6, 2018, Page(s) 611-625, ISSN 1758-2229
Éditeur: Wiley-Blackwell
DOI: 10.1111/1758-2229.12680

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