Methods in Research on Research

Informations projet

MIROR

N° de convention de subvention: 676207

DOI

10.3030/676207

Projet clôturé

Date de signature de la CE 16 Février 2016

Date de début 1 Mars 2016

Date de fin 29 Février 2020

Financé au titre de

• EXCELLENT SCIENCE - Marie Skłodowska-Curie Actions

Coût total

€ 3 864 090,24

Contribution de l’UE

€ 3 864 090,24

Coordonné par

UNIVERSITE PARIS CITE
France

CORDIS fournit des liens vers les livrables publics et les publications des projets HORIZON.

Les liens vers les livrables et les publications des projets du 7e PC, ainsi que les liens vers certains types de résultats spécifiques tels que les jeux de données et les logiciels, sont récupérés dynamiquement sur OpenAIRE .

Livrables

Open Research Data Pilot (1)

ORDP

ORDP: Open Research Data Pilot

Documents, reports (27)

Guidance by UPC

Guidance for research and practice to improve adherence to reporting guidelines

Guidance by UPD

Guidance on the account of risk of bias in meta-analysis

Integrity tool measuring paper integrity

Tool measuring paper integrity

Manual of interventions

Manual describing interventions to improve adherence of reporting guidelines during the peer-review process

Automated tool

Automated tool to identify diagnostic studies

Final communication report

Reporting of the communication and dissemination activities

Mapping of the themes addressed in peer-reviewers comments

Content analysis to identify themes addressed by peer-reviewers in their comments

Guidance for research

Guidance on how to involve collective intelligence

Database of strategies to avoid spin

Database of active strategies to prevent, eliminate or limit spin in clinical research spin

Guidance by UG

Guidance on integration of results obtained from different causal inference in a meta-analysis approach

Newsletter

Newsletter on the network activities every 4 months

Challenge

Team working of the 15 PhD students

Guidance on methods for causal inferences

Guidance document defining adequate methods for causal inferences

Methods for integrating bias

Comparison of different methods for integrating bias in meta-analysis

Guidance for alternative strategies

Comparison of alternative strategies for developing innovative medical tests and development of guidance

Mapping of recruitment practices and methods

Mapping of practices and methods of recruitment and monitoring in trials

Mid-term communication report

Reporting of the communication and dissemination activities

Mapping of the power relationship in communication

Results of the discourse analysis and the use of language implying power-relations in peer-reviewers comments and answers to peer-reviewers

Guidance for patients involvement

Guidance for patients involvement in core outcome set

Final report

Reporting of all the programme progress

Mapping of methods to involve collective intelligence

Systematic review and qualitative study to define how collective intelligence should be involved

Automated tool of spin

Automated tool to identify spin in reports

Guidance by US

Guidance on future research and implementation of the intervention according to the results of its evaluation

Mapping of metrics properties

Analysis of metric properties of reporting guidelines and quality tools

Online tool

Creation of an online tool using visualisation methods with an automatic updating feature to identify new trials as they become available

Guidance by UL

Guidance through a software with a web-based interface

Guidance by AMC

Guidance for reporting results and making conclusions

Other (9)

Data Management Plan

Formulation of a Data Management Plan

Courses

10 network courses

Workshops

5 advanced research network workshops

Journal club webinar

Letter to the editors

Network training certificates

Awarding training certificates to 15 students

Doctoral degree

Awarding doctoral degrees to 15 students

Website

Launch of the network website

Supervisory Board of the network

Creation of the supervisory board of the network

Seminar

1 seminar with visiting researchers

Publications

Other (7)

Contribution of Natural Language Processing in Predicting Rehospitalization Risk

Auteurs: Christopher Norman, Thu Van Nguyen, Aurélie Névéol
Publié dans: Medical Care, Numéro 55/8, 2017, Page(s) 781, ISSN 0025-7079
Éditeur: Lippincott Williams & Wilkins Ltd.
DOI: 10.1097/MLR.0000000000000750

From the Theoretical to the Practical: How to Evaluate the Ethical and Scientific Justifications of Randomized Clinical Trials

Auteurs: Maria Olsen, Melissa K. Sharp, Patrick M. Bossuyt
Publié dans: Journal of Clinical Epidemiology, 2018, ISSN 0895-4356
Éditeur: Elsevier BV
DOI: 10.1016/j.jclinepi.2018.03.008

Different Pediatric Survival After Cardiac Arrest

Auteurs: Camila Olarte Parra, Linda Nyanchoka, Els Goetghebeur
Publié dans: Jama Pediatrics, 2017, Page(s) 708, ISSN 2168-6203
Éditeur: American Medical Association

DIABRISK-SL trial: further consideration of age and impact of imputations

Auteurs: Efstathia Gkioni, Ketevan Glonti, Susanna Dodd, Carrol Gamble
Publié dans: BMC Medicine, Numéro 17/1, 2019, ISSN 1741-7015
Éditeur: BioMed Central
DOI: 10.1186/s12916-019-1361-2

2-Year outcome from two parallel randomized controlled trials. Reporting considerations

Auteurs: Van Thu Nguyen, Cecilia Superchi, Isabelle Boutron
Publié dans: Osteoarthritis and Cartilage, Numéro Volume 27, Numéro 3, 2019, Page(s) e3-e4, ISSN 1063-4584
Éditeur: Elsevier

Evaluating an editorial intervention to reduce spin in the abstract conclusion of manuscripts: a randomized controlled trial

Auteurs: Ghannad, M., Yang, B., Leeflang, M., Aldcroft, A., Bossuyt, P., Schroter, S., & Boutron, I.
Publié dans: OSF registries, 2019
Éditeur: Center for Open Science

Every ROSE has its thorns

Auteurs: Melissa K. Sharp, Linda Nyanchoka, Darko Hren
Publié dans: Environmental Evidence, Numéro 7/1, 2018, ISSN 2047-2382
Éditeur: BMC
DOI: 10.1186/s13750-018-0132-4

Peer reviewed articles (32)

A scoping review protocol on the roles and tasks of peer reviewers in the manuscript review process in biomedical journals

Auteurs: Ketevan Glonti, Daniel Cauchi, Erik Cobo, Isabelle Boutron, David Moher, Darko Hren
Publié dans: BMJ Open, Numéro 7/10, 2017, Page(s) e017468, ISSN 2044-6055
Éditeur: BMJ Publishing Group
DOI: 10.1136/bmjopen-2017-017468

Are CONSORT checklists submitted by authors adequately reflecting what information is actually reported in published papers?

Auteurs: David Blanco, Alice M. Biggane, Erik Cobo
Publié dans: Trials, Numéro 19/1, 2018, ISSN 1745-6215
Éditeur: BioMed Central
DOI: 10.1186/s13063-018-2475-0

Survey indicated that core outcome set development is increasingly including patients, being conducted internationally and using Delphi surveys

Auteurs: Alice M. Biggane, Lucy Brading, Philippe Ravaud, Bridget Young, Paula R. Williamson
Publié dans: Trials, Numéro 19/1, 2018, ISSN 1745-6215
Éditeur: BioMed Central
DOI: 10.1186/s13063-018-2493-y

Interventions to improve adherence to reporting guidelines in health research: a scoping review protocol

Auteurs: David Blanco, Jamie J Kirkham, Douglas G Altman, David Moher, Isabelle Boutron, Erik Cobo
Publié dans: BMJ Open, Numéro 7/11, 2017, Page(s) e017551, ISSN 2044-6055
Éditeur: BMJ Publishing Group
DOI: 10.1136/bmjopen-2017-017551

The STROBE extensions: protocol for a qualitative assessment of content and a survey of endorsement

Auteurs: Melissa K Sharp, Ana Utrobičić, Guadalupe Gómez, Erik Cobo, Elizabeth Wager, Darko Hren
Publié dans: BMJ Open, Numéro 7/10, 2017, Page(s) e019043, ISSN 2044-6055
Éditeur: BMJ Publishing Group
DOI: 10.1136/bmjopen-2017-019043

Tools used to assess the quality of peer review reports: a methodological systematic review

Auteurs: Cecilia Superchi, José Antonio González, Ivan Solà, Erik Cobo, Darko Hren, Isabelle Boutron
Publié dans: BMC Medical Research Methodology, Numéro 19/1, 2019, ISSN 1471-2288
Éditeur: BioMed Central
DOI: 10.1186/s12874-019-0688-x

Disagreements in risk of bias assessment for randomised controlled trials included in more than one Cochrane systematic reviews: a research on research study using cross-sectional design

Auteurs: Lorenzo Bertizzolo, Patrick Bossuyt, Ignacio Atal, Philippe Ravaud, Agnes Dechartres
Publié dans: BMJ Open, Numéro 9/4, 2019, Page(s) e028382, ISSN 2044-6055
Éditeur: BMJ Publishing Group
DOI: 10.1136/bmjopen-2018-028382

A scoping review provided a framework for new ways of doing research through mobilizing collective intelligence

Auteurs: Van Thu Nguyen, Mehdi Benchoufi, Bridget Young, Lina Ghosn, Philippe Ravaud, Isabelle Boutron
Publié dans: Journal of Clinical Epidemiology, Numéro 110, 2019, Page(s) 1-11, ISSN 0895-4356
Éditeur: Elsevier BV
DOI: 10.1016/j.jclinepi.2019.02.007

A scoping review describes methods used to identify, prioritize and display gaps in health research

Auteurs: Linda Nyanchoka, Catrin Tudur-Smith, Van Nguyen Thu, Valentia Iversen, Andrea C. Tricco, Raphaël Porcher
Publié dans: Journal of Clinical Epidemiology, Numéro 109, 2019, Page(s) 99-110, ISSN 0895-4356
Éditeur: Elsevier BV
DOI: 10.1016/j.jclinepi.2019.01.005

Overcoming Barriers to Mobilizing Collective Intelligence in Research: Qualitative Study of Researchers With Experience of Collective Intelligence

Auteurs: Van Thu Nguyen, Bridget Young, Philippe Ravaud, Nivantha Naidoo, Mehdi Benchoufi, Isabelle Boutron
Publié dans: Journal of Medical Internet Research, Numéro 21/7, 2019, Page(s) e13792, ISSN 1438-8871
Éditeur: Journal of medical Internet Research
DOI: 10.2196/13792

Key stakeholders’ perspectives and experiences with defining, identifying and displaying gaps in health research: a qualitative study protocol

Auteurs: Linda Nyanchoka, Catrin Tudur-Smith, Raphaël Porcher, Darko Hren
Publié dans: BMJ Open, Numéro 9/8, 2019, Page(s) e027926, ISSN 2044-6055
Éditeur: BMJ Publishing Group
DOI: 10.1136/bmjopen-2018-027926

A survey exploring biomedical editors’ perceptions of editorial interventions to improve adherence to reporting guidelines

Auteurs: David Blanco, Darko Hren, Jamie J. Kirkham, Erik Cobo, Sara Schroter
Publié dans: F1000Research, Numéro 8, 2019, Page(s) 1682, ISSN 2046-1402
Éditeur: F1000 Research Ltd.
DOI: 10.12688/f1000research.20556.3

Scoping review on interventions to improve adherence to reporting guidelines in health research

Auteurs: David Blanco, Doug Altman, David Moher, Isabelle Boutron, Jamie J Kirkham, Erik Cobo
Publié dans: BMJ Open, Numéro 9/5, 2019, Page(s) e026589, ISSN 2044-6055
Éditeur: BMJ Publishing Group
DOI: 10.1136/bmjopen-2018-026589

PPI in research: a reflection from early stage researchers

Auteurs: Alice M. Biggane, Maria Olsen, Paula R. Williamson
Publié dans: Research Involvement and Engagement, Numéro 5/1, 2019, ISSN 2056-7529
Éditeur: BMC
DOI: 10.1186/s40900-019-0170-2

A systematic review describes models for recruitment prediction at the design stage of a clinical trial

Auteurs: Efstathia Gkioni, Roser Rius, Susanna Dodd, Carrol Gamble
Publié dans: Journal of Clinical Epidemiology, Numéro 115, 2019, Page(s) 141-149, ISSN 0895-4356
Éditeur: Elsevier BV
DOI: 10.1016/j.jclinepi.2019.07.002

Participating in core outcome set development via Delphi surveys: qualitative interviews provide pointers to inform guidance

Auteurs: Alice M Biggane, Paula R Williamson, Philippe Ravaud, Bridget Young
Publié dans: BMJ Open, Numéro 9/11, 2019, Page(s) e032338, ISSN 2044-6055
Éditeur: BMJ Publishing Group
DOI: 10.1136/bmjopen-2019-032338

The STROBE Extensions

Auteurs: Melissa K. Sharp, Darko Hren, Douglas G. Altman
Publié dans: Epidemiology, Numéro 29/6, 2018, Page(s) e53-e56, ISSN 1044-3983
Éditeur: Lippincott Williams & Wilkins Ltd.
DOI: 10.1097/EDE.0000000000000899

Using the STROBE statement: survey findings emphasized the role of journals in enforcing reporting guidelines

Auteurs: Melissa K. Sharp, Lorenzo Bertizzolo, Roser Rius, Elizabeth Wager, Guadalupe Gómez, Darko Hren
Publié dans: Journal of Clinical Epidemiology, Numéro 116, 2019, Page(s) 26-35, ISSN 0895-4356
Éditeur: Elsevier BV
DOI: 10.1016/j.jclinepi.2019.07.019

Editors’ perspectives on the peer-review process in biomedical journals: protocol for a qualitative study

Auteurs: Ketevan Glonti, Darko Hren
Publié dans: BMJ Open, Numéro 8/10, 2018, Page(s) e020568, ISSN 2044-6055
Éditeur: BMJ Publishing Group
DOI: 10.1136/bmjopen-2017-020568

Journal editors’ perspectives on the roles and tasks of peer reviewers in biomedical journals: a qualitative study

Auteurs: Ketevan Glonti, Isabelle Boutron, David Moher, Darko Hren
Publié dans: BMJ Open, Numéro 9/11, 2019, Page(s) e033421, ISSN 2044-6055
Éditeur: BMJ Publishing Group
DOI: 10.1136/bmjopen-2019-033421

A cross-sectional bibliometric study showed suboptimal journal endorsement rates of STROBE and its extensions

Auteurs: Melissa K. Sharp, Ružica Tokalić, Guadalupe Gómez, Elizabeth Wager, Douglas G. Altman, Darko Hren
Publié dans: Journal of Clinical Epidemiology, Numéro 107, 2019, Page(s) 42-50, ISSN 0895-4356
Éditeur: Elsevier BV
DOI: 10.1016/j.jclinepi.2018.11.006

A scoping review on the roles and tasks of peer reviewers in the manuscript review process in biomedical journals

Auteurs: Ketevan Glonti, Daniel Cauchi, Erik Cobo, Isabelle Boutron, David Moher, Darko Hren
Publié dans: BMC Medicine, Numéro 17/1, 2019, ISSN 1741-7015
Éditeur: BioMed Central
DOI: 10.1186/s12916-019-1347-0

A systematic review finds that spin or interpretation bias is abundant in evaluations of ovarian cancer biomarkers

Auteurs: Mona Ghannad, Maria Olsen, Isabelle Boutron, Patrick M. Bossuyt
Publié dans: Journal of Clinical Epidemiology, Numéro 116, 2019, Page(s) 9-17, ISSN 0895-4356
Éditeur: Elsevier BV
DOI: 10.1016/j.jclinepi.2019.07.011

Use of test accuracy study design labels in NICE’s diagnostic guidance

Auteurs: M. Olsen, Z. Zhelev, H. Hunt, J. L. Peters, P. Bossuyt, C. Hyde
Publié dans: Diagnostic and Prognostic Research, Numéro 3/1, 2019, ISSN 2397-7523
Éditeur: BMC
DOI: 10.1186/s41512-019-0062-9

Evaluation of an automatic article selection method for timelier updates of the Comet Core Outcome Set database

Auteurs: Christopher R Norman, Elizabeth Gargon, Mariska M G Leeflang, Aurélie Névéol, Paula R Williamson
Publié dans: Database, Numéro 2019, 2019, ISSN 1758-0463
Éditeur: Oxford University Press
DOI: 10.1093/database/baz109

Measuring the impact of screening automation on meta-analyses of diagnostic test accuracy

Auteurs: Christopher R. Norman, Mariska M. G. Leeflang, Raphaël Porcher, Aurélie Névéol
Publié dans: Systematic Reviews, Numéro 8/1, 2019, ISSN 2046-4053
Éditeur: BioMed Central
DOI: 10.1186/s13643-019-1162-x

On improving the implementation of automatic updating of systematic reviews

Auteurs: Anna Koroleva, Camila Olarte Parra, Patrick Paroubek
Publié dans: JAMIA Open, Numéro 2/4, 2019, Page(s) 400-401, ISSN 2574-2531
Éditeur: Oxford University Press
DOI: 10.1093/jamiaopen/ooz044

Shortcomings in the evaluation of biomarkers in ovarian cancer: a systematic review

Auteurs: Maria Olsen, Mona Ghannad, Christianne Lok, Patrick M. Bossuyt
Publié dans: Clinical Chemistry and Laboratory Medicine (CCLM), Numéro 58/1, 2019, Page(s) 3-10, ISSN 1434-6621
Éditeur: Walter de Gruyter GmbH & Co. KG
DOI: 10.1515/cclm-2019-0038

The conduct and reporting of mediation analysis in recently published randomized controlled trials: results from a methodological systematic review

Auteurs: Tat-Thang Vo, Cecilia Superchi, Isabelle Boutron, Stijn Vansteelandt
Publié dans: Journal of Clinical Epidemiology, Numéro 117, 2020, Page(s) 78-88, ISSN 0895-4356
Éditeur: Elsevier BV
DOI: 10.1016/j.jclinepi.2019.10.001

Pre-emptive versus non pre-emptive kidney transplantation for end-stage kidney disease

Auteurs: Camila Olarte Parra, Cedric Van de Bruaene, Laurens Weynants, Evi V Nagler, Alexandra McAleenan, Roy G Elbers, Julian P T Higgins, Els Goetghebeur
Publié dans: Cochrane Database of Systematic Reviews, Numéro Numéro 12. Art. No.: CD0130, 2018, ISSN 1465-1858
Éditeur: John Wiley & Sons, Ltd
DOI: 10.1002/14651858.cd013073

A novel approach for identifying and addressing case‐mix heterogeneity in individual participant data meta‐analysis

Auteurs: Tat‐Thang Vo, Raphael Porcher, Anna Chaimani, Stijn Vansteelandt
Publié dans: Research Synthesis Methods, Numéro 10/4, 2019, Page(s) 582-596, ISSN 1759-2887
Éditeur: John Wiley & Sons Ltd
DOI: 10.1002/jrsm.1382

Measuring semantic similarity of clinical trial outcomes using deep pre-trained language representations

Auteurs: Anna Koroleva, Sanjay Kamath, Patrick Paroubek
Publié dans: Journal of Biomedical Informatics: X, Numéro 4, 2019, Page(s) 100058, ISSN 2590-177X
Éditeur: Elsevier
DOI: 10.1016/j.yjbinx.2019.100058

Conference proceedings (10)

Extracting relations between outcomes and significance levels in Randomized Controlled Trials (RCTs) publications

Auteurs: Anna Koroleva, Patrick Paroubek
Publié dans: Proceedings of the 18th BioNLP Workshop and Shared Task, 2019, Page(s) 359-369
Éditeur: Association for Computational Linguistics
DOI: 10.18653/v1/W19-5038

Annotating Spin in Biomedical Scientific Publications : the case of Random Controlled Trials (RCTs)

Auteurs: Anna Koroleva and Patrick Paroubek
Publié dans: Proceedings of the Eleventh International Conference on Language Resources and Evaluation (LREC 2018), 2018, ISBN 979-10-95546-00-9
Éditeur: European Language Resources Association (ELRA)

Data Extraction and Synthesis in Systematic Reviews of Diagnostic Test Accuracy: A Corpus for Automating and Evaluating the Process

Auteurs: Norman, Christopher; Leeflang, Mariska; Névéol, Aurélie;
Publié dans: Amia ... Annual Symposium proceedings 2018, 2018, Page(s) 817–826
Éditeur: N/A

Automating Document Discovery in the Systematic Review Process: How to Use Chaff to Extract Wheat

Auteurs: Norman, Christopher; Leeflang, Mariska; Zweigenbaum, Pierre; Névéol, Aurélie
Publié dans: International Conference on Language Resources and Evaluation, May 2018, Miyazaki, Japan, Numéro 1, 2018
Éditeur: HAL CCSD
DOI: 10.5281/zenodo.1173076

A distantly supervised dataset for automated data extraction from diagnostic studies

Auteurs: Norman, Christopher; Leeflang, Mariska; Spijker, René; Kanoulas, Evangelos; Névéol, Aurélie
Publié dans: Proceedings of the 18th BioNLP Workshop and Shared Task, Numéro 7, 2019, Page(s) 105–114
Éditeur: Association for Computational Linguistics
DOI: 10.5281/zenodo.3678084

Automatic detection of inadequate claims in biomedical articles: first steps

Auteurs: Anna, Koroleva; Patrick, Paroubek
Publié dans: WORKSHOP on Curative Power of MEdical DAta, 2017
Éditeur: N/A
DOI: 10.5281/zenodo.1164160

Tri Automatique de la Littérature pour les Revues Systématiques

Auteurs: Norman, Christopher; Leeflang, Mariska; Zweigenbaum, Pierre; Névéol, Aurélie
Publié dans: Actes de TALN 2017, volume 2: articles courts, 2017, Page(s) 234-241
Éditeur: N/A
DOI: 10.5281/zenodo.887605

Vers la détection automatique des affirmations inappropriées dans les articles scientifiques

Auteurs: Koroleva Anna
Publié dans: 19e Rencontres des Étudiants Chercheurs en Informatique pour le Traitement Automatique des Langues (RECITAL),, 2017
Éditeur: N/A
DOI: 10.5281/zenodo.887673

Demonstrating ConstruKT, a text annotation toolkit for generalized linguistic contructions applied to communication spin

Auteurs: Koroleva Anna; Paroubek Patrick
Publié dans: Conference proceedings of the 9th Language and Technology Conference (LTC 2019), 2019
Éditeur: Wydawnictwo Nauka i Innowacje sp. z o.o.
DOI: 10.5281/zenodo.3608725

Analysing clinical trial outcomes in trial registries: towards creating an ontology of clinical trial outcomes

Auteurs: Koroleva Anna; Masson Corentin; Paroubek Patrick
Publié dans: TOTh 2020 Terminology & Ontology: Theories and applications, 2019
Éditeur: N/A
DOI: 10.5281/zenodo.3608733