Genomic hotspots of adaptation to whole genome duplication

Publications

Polyploidy underlies co-option and diversification of biosynthetic triterpene pathways in the apple tribe.

Auteurs: Su W, Jing Y, Lin S, Yue Z, Yang X, Xu J, Wu J, Zhang Z, Xia R, Zhu J, An N, Chen H, Hong Y, Yuan Y, Long T, Zhang L, Jiang Y, Liu Z, Zhang H, Gao Y, Liu Y, Lin H, Wang H, Yant L, Lin S, and Liu Z,
Publié dans: Proceedings of the National Academy of Sciences, 2021, ISSN 0027-8424
Éditeur: National Academy of Sciences
DOI: 10.1073/pnas.2101767118

Convergent evolution in Arabidopsis halleri and Arabidopsis arenosa on calamine metalliferous soils

Auteurs: Veronica Preite; Christian Sailer; Lara Syllwasschy; Sian Bray; Ute Krämer; Levi Yant
Publié dans: Phil Trans Roy. Soc. B, Numéro 15, 2019, ISSN 0962-8436
Éditeur: Royal Society of London
DOI: 10.1101/459362

Effects of FLOWERING LOCUS T on FD during the transition to flowering at the shoot apical meristem of Arabidopsis thaliana

Auteurs: Collani, Silvio; Neumann, Manuela; Yant, Levi; Schmid, Markus
Publié dans: Plant Physiology, Numéro 1, 2018, ISSN 0032-0889
Éditeur: American Society of Plant Biologists
DOI: 10.1101/483925

A novel allele of ASY3 is associated with greater meiotic stability in autotetraploid Arabidopsis lyrata

Auteurs: Paul J. Seear; Catherine L. Gregory; Darren Heavens; Roswitha Schmickl; Roswitha Schmickl; Levi Yant; James D. Higgins
Publié dans: PLoS Genetics, Numéro 8, 2020, ISSN 1553-7390
Éditeur: Public Library of Science
DOI: 10.1371/journal.pgen.1008900

Genomic novelty and process-level convergence in adaptation to whole genome duplication

Auteurs: Bohutínská, Magdalena; Alston, Mark; Monnahan, Patrick; Bray, Sian; Paajanen, Pirita; Kolář, Filip; Yant, Levi
Publié dans: Molecular Biology and Evolution, Numéro 6, 2021, ISSN 0737-4038
Éditeur: Oxford University Press
DOI: 10.1101/2020.01.31.929109

Interspecific introgression mediates adaptation to whole genome duplication.

Auteurs: Sarah Marburger; Patrick J. Monnahan; Paul J. Seear; Simon H. Martin; Jordan Koch; Pirita Paajanen; Magdalena Bohutínská; Magdalena Bohutínská; James D. Higgins; Roswitha Schmickl; Roswitha Schmickl; Levi Yant; Levi Yant
Publié dans: Nature Communications, Numéro 10, 2019, ISSN 2041-1723
Éditeur: Nature Publishing Group
DOI: 10.1038/s41467-019-13159-5

Evolutionary footprints of a cold relic in a rapidly warming world

Auteurs: Eva Wolf Is a corresponding author, Emmanuel Gaquerel, Mathias Scharmann, Levi Yant, Marcus A Koch
Publié dans: eLife, 2021, ISSN 2050-084X
Éditeur: eLife Sciences Publications
DOI: 10.7554/elife.71572

Adaptation to coastal soils through pleiotropic boosting of ion and stress hormone concentrations in wild Arabidopsis thaliana.

Auteurs: Silvia Busoms; Silvia Busoms; Joana Terés; Levi Yant; Charlotte Poschenrieder; David E. Salt
Publié dans: New Phytologist, Numéro 4, 2021, ISSN 0028-646X
Éditeur: Blackwell Publishing Inc.
DOI: 10.1111/nph.17569

Maintenance of adaptive dynamics in a bottlenecked range edge population that retained outcrossing. Molecular Biology and Evolution,

Auteurs: Takou M, Hämälä T, Steige K, Koch E, Dittberner H, Yant L, Genete M, Sunyaev S, Vekemans X, Savolainen O, and de Meux J
Publié dans: Molecular Biology and Evolution, 2021, ISSN 0737-4038
Éditeur: Oxford University Press
DOI: 10.1093/molbev/msaa322

"The ""Polyploid Hop"": shifting challenges and opportunities over the evolutionary lifespan of genome duplications"

Auteurs: Pierre Baduel; Sian Bray; Mario Vallejo-Marin; Filip Kolář; Filip Kolář; Levi Yant; Levi Yant
Publié dans: Frontiers in Ecology and Evolution, Numéro 2, 2018, ISSN 2296-701X
Éditeur: Frontiers Media S.A.
DOI: 10.3389/fevo.2018.00117

Adaptive introgression: how polyploidy reshapes gene flow landscapes.

Auteurs: Roswitha Schmickl; Roswitha Schmickl; Levi Yant
Publié dans: New Phytologist, Numéro 1, 2020, ISSN 0028-646X
Éditeur: Blackwell Publishing Inc.
DOI: 10.1111/nph.17204

Help or hinderance? Investigating the evolutionary impact of whole genome duplication on immunogenetic diversity and parasite load in Corydoras catfishes

Auteurs: Bell EA, Cable J, Oliveira C, Richardson DS, Yant L, Taylor MI
Publié dans: Ecology and Evolution, 2020, ISSN 2045-7758
Éditeur: John Wiley and Sons Ltd
DOI: 10.1002/ece3.6987

Serpentine adaptation in autopolyploid Arabidopsis arenosa is dominated by repeated recruitment of shared alleles.

Auteurs: Konečná V, Bray S, Vlček J, Bohutínská M, Požárová D, Choudhury R, Bollmann A, Flis P, Salt D, Parisod C, *Yant L, *Kolář F
Publié dans: Nature Communications, 2021, ISSN 2041-1723
Éditeur: Nature Publishing Group
DOI: 10.1038/s41467-021-25256-5

Borrowed alleles and convergence in serpentine adaptation

Auteurs: Brian J. Arnold, Brett Lahner, Jeffrey M. DaCosta, Caroline M. Weisman, Jesse D. Hollister, David E. Salt, Kirsten Bomblies, Levi Yant
Publié dans: Proceedings of the National Academy of Sciences, Numéro 113/29, 2016, Page(s) 8320-8325, ISSN 0027-8424
Éditeur: National Academy of Sciences
DOI: 10.1073/pnas.1600405113

The genome-wide impact of cadmium on microRNA and mRNA expression in contrasting Cd responsive wheat genotypes

Auteurs: Min Zhou; Shigang Zheng; Rong Liu; Lu Lu; Chihong Zhang; Lei Zhang; Levi Yant; Yu Wu
Publié dans: BMC Genomics, Numéro 2, 2019, ISSN 1471-2164
Éditeur: BioMed Central
DOI: 10.1186/s12864-019-5939-z

Fluctuating selection on migrant adaptive sodium transporter alleles in coastal Arabidopsis thaliana.

Auteurs: Busoms, Silvia; Paajanen, Pirita; Marburger, Sarah; Bray, Sian; Huang, Xin-Yuan; Poschenrieder, Charlotte; Yant, Levi; Salt, David E.
Publié dans: Proceedings of the National Academy of Sciences, Numéro 21, 2018, ISSN 0027-8424
Éditeur: National Academy of Sciences
DOI: 10.1073/pnas.1816964115

Genome-wide identification, phylogenetic and expression analysis of the heat shock transcription factor family in bread wheat ( Triticum aestivum L.)

Auteurs: Zhou, Min; Zheng, Shigang; Liu, Rong; Lu, Jing; Lu, Lu; Zhang, Chihong; Liu, Zehou; Luo, Congpei; Zhang, Lei; Yant, Levi; Wu, Yu
Publié dans: BMC Genomics, Numéro 2, 2019, ISSN 1471-2164
Éditeur: BioMed Central
DOI: 10.1186/s12864-019-5876-x

Polyploidy breaks speciation barriers in Australian burrowing frogs Neobatrachus.

Auteurs: Polina Yu. Novikova; Ian G. Brennan; William W Booker; Michael Mahony; Paul Doughty; Alan R. Lemmon; Emily Moriarty Lemmon; J. Dale Roberts; Levi Yant; Yves Van de Peer; J. Scott Keogh; Stephen C. Donnellan; Stephen C. Donnellan
Publié dans: PLOS Genetics, Numéro 16, 2020, ISSN 1553-7390
Éditeur: Public Library of Science
DOI: 10.1371/journal.pgen.1008769

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