HPC for Energy

Resultado final

Report of the Implementation of computing Kernels in accelerator based architectures
Report on statistical downscaling strategies
Report on geophysical uncertainty developments in the era of exascale
Report on industrial evaluation of the deployed techniques
Report on dynamical downscaling strategies
Report of Performance Evaluation for different applications in WP4, WP5, WP6
Space-time adaptivity report

• Implementation of libMesh in the target machines • Implementation of time adaptivity in libMesh • Scalability tests on problems specified in WP6 • Scalability tests with advanced linear solvers of task 3.3

Report on forecasting strategies
Analysis of the dynamics, stability, thermal power and pollutant formation in industrial combustors
Report on scalable high order numerical schemes on massive parallel architectures

• Reports on finite difference mimetic method • Reports on the finite element MHM methods

Benchmark of the geophysical algorithms using tests on D6.3
Dissemination Plan

This deliverable will set out the dissemination strategy and the activities to be undertaken to achieve this. Results of the dissemination work will be reported in the periodic and final reports.

Development of detailed, reduced and tabulated chemical kinetic schemes for biomass combustion
Report on the dynamics and stability of biomass-derived synthetic gas flames in portable hydrogen reformers
Report on advances in FD/FE strategies for geophysical wave propagation in 3D
Report on the impact of novel HPC technologies in the O&G industry (outreach)
Report on wind farm modelling comparing RANS and LES models
Scalable sparse linear solvers report

Reports on scalable sparse linear solvers Integration and testing of scalable sparse linear solvers in libMesh Integration and testing of scalable sparse linear solvers in applications from WP4 to WP6

Report of the Implementation of computing Kernels in symmetric multicore-based architectures
Industrial guidelines for the use and operation of biomass-derived fuels.
Video

BSC will produce a final video to disseminate the results of the project

Project Management and Quality Guidelines

This deliverable will describe the project’s internal management procedures, detailing the project’s Quality assurance process as well as a detailed Risk evaluation and internal communication tools and mechanisms.

Report on performance of ABL-CFD models under HPC
Big Data management and analysis of numerical simulations report

Report on the data management support for pre and post processing of numerical simulation. Implementation of SimDB and UpsilonDB giving support for numerical simulation data Report on Chiron use to support Uncertainty Quantification in numerical simulations for the applications in WP6 Implementation of user interaction support in Chiron Report on user interaction support in Chiron for WP6 applications

Final Dissemination and Exploitation Report

This deliverable will report on the dissemination and exploitation activities of the project

Report on multilevel programming and I/O optimizations

Website deploying a suite of geophysical tests for wave propagation problems on extreme scale machines

Publicaciones

Analysis of GPU Power Consumption Using Internal Sensors

Autores: Mariza Ferro; André Yokoyama; Vinícius Klôh; Gabrieli Silva; Rodrigo Gandra; Ricardo Bragança; André Bulcão; Bruno Schulze
Publicado en: XXXVII Congresso da Sociedade Brasileira de Computação, Edición 5, 2017
Editor: XXXVII Congresso da Sociedade Brasileira de Computação
DOI: 10.5281/zenodo.833347

Three-Dimensional CSEM Modelling on Unstructured Tetrahedral Meshes Using Edge Finite Elements

Autores: Octavio Castillo-Reyes, Josep de la Puente, José María Cela
Publicado en: High Performance Computing. CARLA 2016. Communications in Computer and Information Science, 2017, Página(s) 247-256
Editor: Springer International Publishing
DOI: 10.1007/978-3-319-57972-6_18

Estudo de Abordagens de Monitoramento de Desempenho e Energia para Computação Científica

Autores: Gabrieli Dutra Silva; Mariza Ferro; Victor Dias Oliveira; Vinícius Prata Klôh; André Yokoyama; Bruno Shulze
Publicado en: XVII Simpósio em Sistemas Computacionais de Alto Desempenho - WSCAD-WIC-2017, Edición 3, 2017
Editor: Simpósio em Sistemas Computacionais de Alto Desempenho
DOI: 10.5281/zenodo.1035164

Evaluating directive-based programming models on Wave Propagation Kernels

Autores: S. Rodriguez
Publicado en: 79th EAGE Conference and Exhibition 2017 - Workshops, 2017, ISBN 978-94-6282-219-1
Editor: EAGE Publications BV
DOI: 10.3997/2214-4609.201701763

Optimizing Fully Anisotropic Elastic Propagation on 2nd Generation Intel Xeon Phi Processors

Autores: A. Farres, A. Duran, C. Rosas, M. Hanzich, C. Yount, S. Fernández
Publicado en: 79th EAGE Conference and Exhibition 2017, 2017, ISBN 978-94-6282-217-7
Editor: EAGE Publications BV
DOI: 10.3997/2214-4609.201700497

Spark Scalability Analysis in a Scientific Workflow

Autores: Souza, Renan; Silva, Vitor; Miranda, Pedro; Lima, Alexandre; Valduriez, Patrick; Mattoso, Marta
Publicado en: Simpósio Brasileiro de Banco de Dados, 2017, Uberlândia. 32º SBBD, Edición 2, 2017
Editor: Simpósio Brasileiro de Banco de Dados

Data mining the memory access stream to detect anomalous application behavior

Autores: Francis B. Moreira, Matthias Diener, Philippe O. A. Navaux, Israel Koren
Publicado en: Proceedings of the Computing Frontiers Conference on ZZZ - CF'17, 2017, Página(s) 45-52, ISBN 9781-450344876
Editor: ACM Press
DOI: 10.1145/3075564.3075578

Experimental and analytical study of Xeon Phi reliability

Autores: Daniel Oliveira, Laércio Pilla, Nathan DeBardeleben, Sean Blanchard, Heather Quinn, Israel Koren, Philippe Navaux, Paolo Rech
Publicado en: Proceedings of the International Conference for High Performance Computing, Networking, Storage and Analysis on - SC '17, 2017, Página(s) 1-12, ISBN 9781-450351140
Editor: ACM Press
DOI: 10.1145/3126908.3126960

Experimentos no uso do modelo de atores para simulações numéricas distribuídas baseadas em elementos finitos

Autores: Gomes, A. T. A., Zillmer, F.
Publicado en: Workshop de Computação em Clouds e Aplicações (WCGA), 2017, Belém-PA, Brazil. Anais do XV Workshop de Computação em Clouds e Aplicações (WCGA 2017), 2017
Editor: Workshop de Computação em Clouds e Aplicações

High Performance I/O for Seismic Wave Propagation Simulations

Autores: Francieli Zanon Boito, Jean Luca Bez, Fabrice Dupros, Mario A. R. Dantas, Philippe O. A. Navaux, Hideo Aochi
Publicado en: 2017 25th Euromicro International Conference on Parallel, Distributed and Network-based Processing (PDP), 2017, Página(s) 31-38, ISBN 978-1-5090-6058-0
Editor: IEEE
DOI: 10.1109/PDP.2017.92

Performance analysis of the MHM simulator in a petascale machine

Autores: Antonio Tadeu Azevedo Gomes, Diego Paredes, Weslley da Silva Pereira, Roberto Pinto Souto, Frédéric Valentin
Publicado en: Proceedings of the XXXVIII Iberian Latin American Congress on Computational Methods in Engineering, 2017
Editor: ABMEC Brazilian Association of Computational Methods in Engineering
DOI: 10.20906/cps/cilamce2017-0381

Residual-based variational multiscale simulation of erosion using libMesh

Autores: Malú Grave, José J. Camata, Alvaro L. G A. Coutinho
Publicado en: Proceedings of the XXXVIII Iberian Latin American Congress on Computational Methods in Engineering, 2017
Editor: ABMEC Brazilian Association of Computational Methods in Engineering
DOI: 10.20906/CPS/CILAMCE2017-0370

Leveraging cloud heterogeneity of cost-efficient execution of parallel applications

Autores: Eduardo Roloff, Matthias Diener, Emmanuell Diaz Carreño, Luciano Paschoal Gaspary, Philippe O. A. Navaux
Publicado en: 2017, Página(s) 399-411
Editor: Springer International Publishing
DOI: 10.1007/978-3-319-64203-1_29

Simulation of a collapsing column for dense granular flows

Autores: Linda G. Gesenhues, José J. Camata, Alvaro L.G.A. Coutinho
Publicado en: Proceedings of the XXXVIII Iberian Latin American Congress on Computational Methods in Engineering, 2017
Editor: ABMEC Brazilian Association of Computational Methods in Engineering
DOI: 10.20906/CPS/CILAMCE2017-0778

Strategies to Improve the Performance of a Geophysics Model for Different Manycore Systems

Autores: Matheus S. Serpa, Eduardo H.M. Cruz, Matthias Diener, Arthur M. Krause, Albert Farres, Claudia Rosas, Jairo Panetta, Mauricio Hanzich, Philippe O.A. Navaux
Publicado en: 2017 International Symposium on Computer Architecture and High Performance Computing Workshops (SBAC-PADW), 2017, Página(s) 49-54, ISBN 978-1-5386-4819-3
Editor: IEEE
DOI: 10.1109/SBAC-PADW.2017.17

TARS: An Array Model with Rich Semantics for Multidimensional Data

Autores: Gaspar D., Porto F., Akbarinia R., Pacitti E.
Publicado en: ER FORUM 2017: Conceptual Modeling : Research In Progress, 2017
Editor: ER FORUM

Tracking of Online Parameter Fine-tuning in Scientific Workflows

Autores: Souza R., Silva V., Camata J.J., Coutinho A.L.G.A., Valduriez P., Mattoso M.
Publicado en: Workflows in Support of Large-Scale Science, 2017, Denver, CO. Supercomputing Workshops, SC17, 12th WORKS, 2017., 2017
Editor: Workflows in Support of Large-Scale Science

Analyzing Dynamic Task-Based Applications on Hybrid Platforms: An Agile Scripting Approach

Autores: Garcia Pinto, Vinicius; Thibault, Samuel; Legrand, Arnaud; Danjean, Vincent; Mello Schnorr, Lucas; Stanisic, Luka
Publicado en: 3rd Workshop on Visual Performance Analysis (VPA), 2016
Editor: CEDMAV

Database System Support of Simulation Data

Autores: Blanco, Pablo; Valduriez, Patrick; Lustosa, Hermano; Porto, Fabio
Publicado en: Proceedings of the VLDB Endowment (PVLDB), Edición N 13, Vol. 9, 2016, Página(s) 1329-1340, ISSN 2150-8097
Editor: VLDB Endowment

Resolution strategy for the Hybridizable Discontinuous Galerkin system for solving Helmholtz elastic wave equations

Autores: Calandra, Henri; Diaz, Julien; Lanteri, Stephane; Bonnasse-Gahot, Marie
Publicado en: Face-to-face meeting HPC4E Brazilian-European project, Sep 2016, Gramado, Brazil, 2016
Editor: HAL-Inria

Scientific Workflow Execution with Multiple Objectives in Multisite Clouds

Autores: Valduriez, Patrick; Oliveira, Daniel; Liu, Ji; Pacitti, Esther; Mattoso, Marta
Publicado en: Proceedings of the BDA 2016 Conference., 2016
Editor: 32eme Conference sur la Gestion de Donnees - Principes, Technologies et Applications

Comparison of solvers performance when solving the 3D Helmholtz elastic wave equations over the Hybridizable Discontinuous Galerkin method

Autores: Calandra, Henri; Diaz, Julien; Bonnasse-Gahot, Marie; Lanteri, Stephane
Publicado en: MATHIAS – TOTAL Symposium on Mathematics, 2016
Editor: MATHIAS – TOTAL Symposium on Mathematics

Mimetic Operators for Seismic Exploration

Autores: Ferrer, Miguel; Rojas, Otilio; Kormann, Jean; de la Puente, Josep
Publicado en: 78th EAGE Conference and Exhibition 2016 - Workshops, 2016
Editor: European Association of Geoscientists and Engineers
DOI: 10.3997/2214-4609.201601663

Applying future Exascale HPC methodologies in the energy sector

Autores: Coutinho, Alvaro LGA; Costa, Danilo; Moríñigo, José A.; Camata, José J.; Kourdioumov, Vadim; Oliveira, Daniel; Navarro, Jose; Souza, Renan; Jiménez, Carmen; Fernández-Galisteo, Daniel; Rodríguez-Pascual, Manuel; Mattoso, Marta; Valduriez, Patrick; Miras, Thomas; Silva, Vítor; Mayo-García, Rafael; José M. Cela
Publicado en: Russian Supercomputing Days, Edición 3, 2016, Página(s) 9-19
Editor: Russian Supercomputing Days

Multiscale Hybrid-Mixed Method for the Stokes and Brinkman Equations – The Method

Autores: Valentin, Frédéric; Harder, Christopher; Poza, Abner,; Araya, Rodolfo
Publicado en: XXXVI Congresso Nacional de Matemática Aplicada e Computacional (CNMAC), 2016
Editor: CNMAC

Online Input Data Reduction in Scientific Workflows

Autores: Souza, Renan; Valduriez, Patrick; Coutinho, Alvaro,; Mattoso, Marta; Silva, Vítor
Publicado en: WORKS: Workflows in Support of Large-scale Science, 2016
Editor: ACM SIGHPC; IEEE

Impacto da Arquitetura de Memória de GPGPUs na Velocidade da Computaçâo de Estênceis

Autores: Nasciutti, T.C., Panetta, J.
Publicado en: XVII Simpósio em Sistemas Computacionais de Alto Desempenho (WSCAD 2016), 2016, ISSN 2316-9915
Editor: Comissão Especial de Arquitetura de Computadores e Processamento de Alto Desempenho (CEACPAD)

Enhancing Energy Production with Exascale HPC Methods.

Autores: José J. Camata, José M. Cela, Danilo Costa, Alvaro Coutinho, Daniel Fernández-Galisteo, Carmen Jiménez, Vadim Kourdioumov, Marta Mattoso, Rafael Mayo-García, Thomas Miras, José A. Moríñigo, Jorge Navarro, Philippe O.A. Navaux, Daniel de Oliveira, Manuel Rodríguez-Pascual, Vítor Silva, Renan Souza. Patrick Valduriez
Publicado en: Communications in Computer and Information Science (CCIS). CARLA 2016. Latin American High Performance Computing Conference, 2016, ISSN 1865-0929
Editor: Springer

Edge-based parallel framework for the simulation of 3d CSEM surveys

Autores: Octavio Castillo Reyes, Josep De La Puente, Vladimir Puzyrev, Jose Cela
Publicado en: International Conference and Exhibition, Barcelona, Spain, 3-6 April 2016, 2016, Página(s) 81-81, ISSN 2159-6832
Editor: Society of Exploration Geophysicists and American Association of Petroleum Geologists
DOI: 10.1190/ice2016-6274394.1

Integrating Domain-data Steering with Code-profiling Tools to Debug Data-intensive Workflows

Autores: Silva, V., Neves, L., Souza, R., Coutinho, A., Oliveira, D. de, Mattoso, M.
Publicado en: Workflows in Support of Large-Scale Science, 2016
Editor: WORKS 2016: Workflows in Support of Large-Scale Science

Fostering Collaboration in Energy Research and Technological Developments Applying New Exascale HPC Techniques

Autores: Jose Maria Cela, Philippe O. A. Navaux, Alvaro L. G. A. Coutinho, Rafael Mayo-Garcia
Publicado en: 2016 16th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing (CCGrid), 2016, Página(s) 701-706, ISBN 978-1-5090-2453-7
Editor: IEEE
DOI: 10.1109/CCGrid.2016.51

Energy Consumption Estimation in Parallel Applications: an Analysis in Real and Theoretical Models

Autores: Silveira, D.S., Moro, G.B., da Cruz, E. H. M., Navaux, P.O.A., Mello Schnorr, L., Bampi, S.
Publicado en: XVII Simpósio em Sistemas Computacionais de Alto Desempenho (WSCAD 2016), 2016
Editor: Biblioteca Digital Brasileira de Computaçao

Eficiência Energética e Desempenho de E/S com Arquiteturas de Baixa Potência

Autores: Pavan, P.J., Lorenzoni, R.K., Bez, J.L., Padoin, E.L., Boito, F.Z., Navaux, P.O.A.
Publicado en: 2016
Editor: XVII Simpósio em Sistemas Computacionais de Alto Desempenho

Performance Evaluation of Multiple Cloud Data Centers Allocations for HPC

Autores: Roloff, E., Carreño, E. D., Valverde-Sanchez, J.K.M., Diener, M., da Silva Serpa, M., Houzeaux, G., Schnorr, L.M., Maillard, N., Paschoal Gaspary, L., Navaux P.O.A.
Publicado en: Latin American High Performance Computing Conference CARLA 2016, 2016
Editor: CARLA

Scientific Workflow Scheduling with Provenance Support in Multisite Cloud

Autores: Liu, J., Pacitti, E.,Valduriez, P.,Mattoso, M.
Publicado en: 12th International Meeting on High Performance Computing for Computational Science. VECPAR 2016, 2016
Editor: VECPAR

Study of the Wall Thermal Condition Effect in a Lean-Premixed Downscaled Can Combustor Using Large-Eddy Simulation

Autores: D. Mira, M. Vázquez, G. Houzeaux, S. Gövert, J. W. B. Kok, E. I. Mahiques, L. Panek
Publicado en: Volume 5B: Heat Transfer, 2016, Página(s) V05BT17A018, ISBN 978-0-7918-4979-8
Editor: ASME
DOI: 10.1115/GT2016-58016

Radiation-Induced Error Criticality in Modern HPC Parallel Accelerators

Autores: Olivera, D., Pilla, L., Hanzich, M., Fratin, V., Fernandes, F., Lunardi, Cl, Cela, J.M., Navaux, P.O.A., Carro, L., Rech, P.
Publicado en: 23rd IEEE Symposium on High Performance Computer Architecture (HPCA), 2017
Editor: IEEE

Towards Energy-Efficient Storage Servers

Autores: Machado, V., Braga, A., Rampon, N., Bez, J., Zanon Boito, F., Kassick, R., Padoin, E., Diaz, J., Méhaut, J-F., Navaux, P. O. A
Publicado en: 32nd ACM Symposium on Applied Computing (SAC 2017), 2017
Editor: -

TWINS: Server Access Coordination in the I/O Forwarding Layer

Autores: Bez, J.L., Zanon Boito, F., Mello Schnorr, L., Mehaut, J-F., Navaux, P.O.A.
Publicado en: 25th Euromicro International Conference on Parallel, Distributed, and Network-Based Processing (PDP 2017), 2017
Editor: -

A CFD framework for offshore and onshore wind farm simulation

Autores: Matias Avila, Abel Gargallo-Peiró, Arnau Folch
Publicado en: Journal of Physics: Conference Series, Edición 854, 2017, Página(s) 012002, ISSN 1742-6588
Editor: Institute of Physics
DOI: 10.1088/1742-6596/854/1/012002

Using Power Demand and Residual Load Imbalance in the Load Balancing to Save Energy of Parallel Systems

Autores: Edson Luiz Padoin, Víctor Martínez, Philippe O.A. Navaux, Jean-François Méhaut
Publicado en: Procedia Computer Science, Edición 108, 2017, Página(s) 695-704, ISSN 1877-0509
Editor: Elsevier
DOI: 10.1016/j.procs.2017.05.215

A wrapper around parallel MUMPS solver to reduce its memory usage and execution time for finite element method computations

Autores: Maciej Paszyński, Antônio Tadeu Azevedo Gomes
Publicado en: Procedia Computer Science, Edición 108, 2017, Página(s) 838-847, ISSN 1877-0509
Editor: Elsevier
DOI: 10.1016/j.procs.2017.05.096

In situ visualization and data analysis for turbidity currents simulation

Autores: Jose J. Camata, Vítor Silva, Patrick Valduriez, Marta Mattoso, Alvaro L.G.A. Coutinho
Publicado en: Computers & Geosciences, Edición 110, 2018, Página(s) 23-31, ISSN 0098-3004
Editor: Pergamon Press Ltd.
DOI: 10.1016/j.cageo.2017.09.013

Performance Improvement of Stencil Computations for Multi-core Architectures based on Machine Learning

Autores: Víctor Martínez, Fabrice Dupros, Márcio Castro, Philippe Navaux
Publicado en: Procedia Computer Science, Edición 108, 2017, Página(s) 305-314, ISSN 1877-0509
Editor: Elsevier
DOI: 10.1016/j.procs.2017.05.164

Quality Control of Surface Wind Observations in Northeastern North America. Part II: Measurement Errors

Autores: Etor E. Lucio-Eceiza, J. Fidel González-Rouco, Jorge Navarro, Hugo Beltrami, Jorge Conte
Publicado en: Journal of Atmospheric and Oceanic Technology, Edición 35/1, 2018, Página(s) 183-205, ISSN 0739-0572
Editor: American Meteorological Society
DOI: 10.1175/jtech-d-16-0205.1

Effects of stoichiometry on premixed flames propagating in narrow channels: symmetry-breaking bifurcations

Autores: Daniel Fernández-Galisteo, Carmen Jiménez, Mario Sánchez-Sanz, Vadim N. Kurdyumov
Publicado en: Combustion Theory and Modelling, Edición 21/6, 2017, Página(s) 1050-1065, ISSN 1364-7830
Editor: Institute of Physics Publishing
DOI: 10.1080/13647830.2017.1333157

Acceleration strategies for elastic full waveform inversion workflows in 2D and 3D

Autores: Jean Kormann, Juan E. Rodríguez, Miguel Ferrer, Albert Farrés, Natalia Gutiérrez, Josep de la Puente, Mauricio Hanzich, José M. Cela
Publicado en: Computational Geosciences, 2016, ISSN 1420-0597
Editor: Kluwer Academic Publishers
DOI: 10.1007/s10596-016-9593-0

Seismic wave propagation simulations on low-power and performance-centric manycores

Autores: Márcio Castro, Emilio Francesquini, Fabrice Dupros, Hideo Aochi, Philippe O.A. Navaux, Jean-François Méhaut
Publicado en: Parallel Computing, Edición 54, 2016, Página(s) 108-120, ISSN 0167-8191
Editor: Elsevier BV
DOI: 10.1016/j.parco.2016.01.011

Toward an automatic full-wave inversion: Synthetic study cases

Autores: Jean Kormann, Juan Esteban Rodríguez, Natalia Gutierrez, Miguel Ferrer, Otilio Rojas, Josep de la Puente, Mauricio Hanzich, José María Cela
Publicado en: The Leading Edge, Edición 35/12, 2016, Página(s) 1047-1052, ISSN 1070-485X
Editor: Society of Exploration Geophysicists
DOI: 10.1190/tle35121047.1

Hardware-Assisted Thread and Data Mapping in Hierarchical Multicore Architectures

Autores: Eduardo H. M. Cruz, Matthias Diener, Laércio L. Pilla, Philippe O. A. Navaux
Publicado en: ACM Transactions on Architecture and Code Optimization, Edición 13/3, 2016, Página(s) 1-28, ISSN 1544-3566
Editor: Association for Computing Machinary, Inc.
DOI: 10.1145/2975587

Wavefield compression for adjoint methods in full-waveform inversion

Autores: Christian Boehm, Mauricio Hanzich, Josep de la Puente, Andreas Fichtner
Publicado en: GEOPHYSICS, Edición 81/6, 2016, Página(s) R385-R397, ISSN 0016-8033
Editor: Society of Exploration Geophysicists
DOI: 10.1190/geo2015-0653.1

Elastic Full Waveform Inversion (FWI) of Reflection Data with a Phase Misfit Function

Autores: Jean Kormann, Juan Esteban Rodríguez, Miguel Ferrer, Natalia Gutiérrez, Josep de la Puente, Mauricio Hanzich, José María Cela
Publicado en: High Performance Computer Applications, 2016, Página(s) 277-284, ISBN 978-3-319-32243-8
Editor: Springer International Publishing
DOI: 10.1007/978-3-319-32243-8_19

A Sharing-Aware Memory Management Unit for Online Mapping in Multi-core Architectures

Autores: Eduardo H. M. Cruz, Matthias Diener, Laércio L. Pilla, Philippe O. A. Navaux
Publicado en: Euro-Par 2016: Parallel Processing, 2016, Página(s) 490-501, ISBN 978-3-319-43659-3
Editor: Springer International Publishing
DOI: 10.1007/978-3-319-43659-3_36

Modelling and advanced simulation of wave propagation phenomena in 3D geophysical media.

Autores: Diaz, Julien
Publicado en: Analysis of PDEs [math.AP]. Université de Pau et des Pays de l'Adour, 2016, 2016
Editor: Université de Pau et des Pays de l'Adour

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