Advanced MR methods for characterization of microstructural brain damage

Project Information

MICROBRADAM

Grant agreement ID: 691110

DOI 10.3030/691110

Project closed

EC signature date 11 November 2015

Start date 1 November 2015

End date 31 October 2019

Funded under

• EXCELLENT SCIENCE - Marie Skłodowska-Curie Actions

Total cost € 540 000,00

EU contribution € 540 000,00

Coordinated by

MUSEO STORICO DELLA FISICA E CENTRO STUDI E RICERCHE ENRICO FERMI
Italy

Deliverables

Other (4)

Scientific workshops

"Three workshops #1 and #2 at the International School on Magnetic Resonance and Brain Function #3 at the University of Eastern FInland"

“Doors open”

Public events, at least 2 events at Enrico Fermi Center

Human dataset complete, final report

Report and dataset.

Press conferences

"Four press conferences/releases: #1 on planned activity of the project #2 on MRI results #3 on knowledge sharing and secondments between partners #4 on final results "

Documents, reports (2)

Scientific publications on MRI development/application on animals

At least 2 Journal papers

Scientific publications on MRI development/application on humans

at least 2 Journal papers

Websites, patent fillings, videos etc. (1)

Web site released

Self explanatory. This is also a Milestone

Publications

Peer reviewed articles (18)

Task-Related Modulations of BOLD Low-Frequency Fluctuations within the Default Mode Network

Author(s): Silvia Tommasin, Daniele Mascali, Tommaso Gili, Ibrahim Eid Assan, Marta Moraschi, Michela Fratini, Richard G. Wise, Emiliano Macaluso, Silvia Mangia, Federico Giove
Published in: Frontiers in Physics, Issue 5, 2017, ISSN 2296-424X
Publisher: Frontiers
DOI: 10.3389/fphy.2017.00031

Orientation selective deep brain stimulation

Author(s): Lauri J Lehto, Julia P Slopsema, Matthew D Johnson, Artem Shatillo, Benjamin A Teplitzky, Lynn Utecht, Gregor Adriany, Silvia Mangia, Alejandra Sierra, Walter C Low, Olli Gröhn, Shalom Michaeli
Published in: Journal of Neural Engineering, Issue 14/1, 2017, Page(s) 016016, ISSN 1741-2560
Publisher: Institute of Physics Publishing
DOI: 10.1088/1741-2552/aa5238

Lysophosphatidyl Choline Induced Demyelination in Rat Probed by Relaxation along a Fictitious Field in High Rank Rotating Frame

Author(s): Lauri J. Lehto, Aloma A. Albors, Alejandra Sierra, Laura Tolppanen, Lynn E. Eberly, Silvia Mangia, Antti Nurmi, Shalom Michaeli, Olli Gröhn
Published in: Frontiers in Neuroscience, Issue 11, 2017, ISSN 1662-453X
Publisher: Frontiers
DOI: 10.3389/fnins.2017.00433

Multi-modal Brain MRI in Subjects with PD and iRBD

Author(s): Silvia Mangia, Alena Svatkova, Daniele Mascali, Mikko J. Nissi, Philip C. Burton, Petr Bednarik, Edward J. Auerbach, Federico Giove, Lynn E. Eberly, Michael J. Howell, Igor Nestrasil, Paul J. Tuite, Shalom Michaeli
Published in: Frontiers in Neuroscience, Issue 11, 2017, ISSN 1662-453X
Publisher: Frontiers
DOI: 10.3389/fnins.2017.00709

MB-SWIFT functional MRI during deep brain stimulation in rats

Author(s): Lauri J. Lehto, Djaudat Idiyatullin, Jinjin Zhang, Lynn Utecht, Gregor Adriany, Michael Garwood, Olli Gröhn, Shalom Michaeli, Silvia Mangia
Published in: NeuroImage, Issue 159, 2017, Page(s) 443-448, ISSN 1053-8119
Publisher: Academic Press
DOI: 10.1016/j.neuroimage.2017.08.012

Disruption of Semantic Network in Mild Alzheimer’s Disease Revealed by Resting-State fMRI

Author(s): Daniele Mascali, Mauro DiNuzzo, Laura Serra, Silvia Mangia, Bruno Maraviglia, Marco Bozzali, Federico Giove
Published in: Neuroscience, Issue 371, 2018, Page(s) 38-48, ISSN 0306-4522
Publisher: Elsevier BV
DOI: 10.1016/j.neuroscience.2017.11.030

White matter alterations in Parkinson’s disease with normal cognition precede grey matter atrophy

Author(s): Ivan Rektor, Alena Svátková, Lubomir Vojtíšek, Iva Zikmundová, Jirí Vaníček, András Király, Nikoletta Szabó
Published in: PLOS ONE, Issue 13/1, 2018, Page(s) e0187939, ISSN 1932-6203
Publisher: Public Library of Science
DOI: 10.1371/journal.pone.0187939

Assessment of the effects of different sample perfusion procedures on phase-contrast tomographic images of mouse spinal cord

Author(s): E. Stefanutti, A. Sierra, P. Miocchi, L. Massimi, F. Brun, L. Maugeri, I. Bukreeva, A. Nurmi, G. Begani Provinciali, G. Tromba, O. Gröhn, F. Giove, A. Cedola, M. Fratini
Published in: Journal of Instrumentation, Issue 13/03, 2018, Page(s) C03027-C03027, ISSN 1748-0221
Publisher: Institute of Physics
DOI: 10.1088/1748-0221/13/03/C03027

Scale-invariant rearrangement of resting state networks in the human brain under sustained stimulation

Author(s): Silvia Tommasin, Daniele Mascali, Marta Moraschi, Tommaso Gili, Ibrahim Eid Hassan, Michela Fratini, Mauro DiNuzzo, Richard G. Wise, Silvia Mangia, Emiliano Macaluso, Federico Giove
Published in: NeuroImage, Issue 179, 2018, Page(s) 570-581, ISSN 1053-8119
Publisher: Academic Press
DOI: 10.1016/j.neuroimage.2018.06.006

Corrigendum: Multi-modal Brain MRI in Subjects with PD and iRBD

Author(s): Silvia Mangia, Alena Svatkova, Daniele Mascali, Mikko J. Nissi, Philip C. Burton, Petr Bednarik, Edward J. Auerbach, Federico Giove, Lynn E. Eberly, Michael J. Howell, Igor Nestrasil, Paul J. Tuite, Shalom Michaeli
Published in: Frontiers in Neuroscience, Issue 12, 2018, ISSN 1662-453X
Publisher: Frontiers in
DOI: 10.3389/fnins.2018.00446

Capturing exchange using periodic radiofrequency irradiation

Author(s): Timo Liimatainen, Hanne Laakso, Djaudat Idiyatullin, Silvia Mangia, Shalom Michaeli
Published in: Journal of Magnetic Resonance, Issue 296, 2018, Page(s) 79-84, ISSN 1090-7807
Publisher: Academic Press
DOI: 10.1016/j.jmr.2018.09.001

Temporal Information Entropy of the Blood-Oxygenation Level-Dependent Signals Increases in the Activated Human Primary Visual Cortex

Author(s): Mauro DiNuzzo, Daniele Mascali, Marta Moraschi, Giorgia Bussu, Bruno Maraviglia, Silvia Mangia, Federico Giove
Published in: Frontiers in Physics, Issue 5, 2017, ISSN 2296-424X
Publisher: Frontiers
DOI: 10.3389/fphy.2017.00007

Tuning Neuromodulation Effects by Orientation Selective Deep Brain Stimulation in the Rat Medial Frontal Cortex

Author(s): Lauri J. Lehto, Pavel Filip, Hanne Laakso, Alejandra Sierra, Julia P. Slopsema, Matthew D. Johnson, Lynn E. Eberly, Walter C. Low, Olli Gröhn, Heikki Tanila, Silvia Mangia, Shalom Michaeli
Published in: Frontiers in Neuroscience, Issue 12, 2018, Page(s) 899, ISSN 1662-453X
Publisher: Frontiers
DOI: 10.3389/fnins.2018.00899

Clinical deep brain stimulation strategies for orientation-selective pathway activation

Author(s): Julia P Slopsema, Edgar Peña, Remi Patriat, Lauri J Lehto, Olli Gröhn, Silvia Mangia, Noam Harel, Shalom Michaeli, Matthew D Johnson
Published in: Journal of Neural Engineering, Issue 15/5, 2018, Page(s) 056029, ISSN 1741-2560
Publisher: Institute of Physics Publishing
DOI: 10.1088/1741-2552/aad978

Consensus paper: Decoding the Contributions of the Cerebellum as a Time Machine. From Neurons to Clinical Applications

Author(s): Martin Bareš, Richard Apps, Laura Avanzino, Assaf Breska, Egidio D’Angelo, Pavel Filip, Marcus Gerwig, Richard B. Ivry, Charlotte L. Lawrenson, Elan D. Louis, Nicholas A. Lusk, Mario Manto, Warren H. Meck, Hiroshi Mitoma, Elijah A. Petter
Published in: The Cerebellum, Issue 18/2, 2019, Page(s) 266-286, ISSN 1473-4222
Publisher: Springer New York
DOI: 10.1007/s12311-018-0979-5

Multiscale Imaging Approach for Studying the Central Nervous System: Methodology and Perspective

Author(s): Michela Fratini, Ali Abdollahzadeh, Mauro DiNuzzo, Raimo A. Salo, Laura Maugeri, Alessia Cedola, Federico Giove, Olli Gröhn, Jussi Tohka, Alejandra Sierra
Published in: Frontiers in Neuroscience, Issue 14, 2020, Page(s) 72, ISSN 1662-453X
Publisher: Frontiers
DOI: 10.3389/fnins.2020.00072

Disruption of Multiple Distinctive Neural Networks Associated With Impulse Control Disorder in Parkinson's Disease

Author(s): Pavel Filip, Pavla Linhartová, Pavlína Hlavatá, Rastislav Šumec, Marek Baláž, Martin Bareš, Tomáš Kašpárek
Published in: Frontiers in Human Neuroscience, Issue 12, 2018, ISSN 1662-5161
Publisher: Frontiers Research Foundation
DOI: 10.3389/fnhum.2018.00462

Behavioral and Neuroanatomical Account of Impulsivity in Parkinson's Disease

Author(s): Pavlína Hlavatá, Pavla Linhartová, Rastislav Šumec, Pavel Filip, Miroslav Světlák, Marek Baláž, Tomáš Kašpárek, Martin Bareš
Published in: Frontiers in Neurology, Issue 10, 2020, ISSN 1664-2295
Publisher: Frontiers Research Foundation
DOI: 10.3389/fneur.2019.01338

Book chapters (1)

Automatic Rodent Brain MRI Lesion Segmentation with Fully Convolutional Networks

Author(s): Juan Miguel Valverde, Artem Shatillo, Riccardo De Feo, Olli Gröhn, Alejandra Sierra, Jussi Tohka
Published in: Machine Learning in Medical Imaging - 10th International Workshop, MLMI 2019, Held in Conjunction with MICCAI 2019, Shenzhen, China, October 13, 2019, Proceedings, Issue 11861, 2019, Page(s) 195-202, ISBN 978-3-030-32691-3
Publisher: Springer International Publishing
DOI: 10.1007/978-3-030-32692-0_23