Evolutionary genetics of guppy sex chromosomes

Project Information

GUPPYSEX

Grant agreement ID: 695225

DOI

10.3030/695225

Project closed

EC signature date 1 July 2016

Start date 1 August 2016

End date 31 July 2022

Funded under

• EXCELLENT SCIENCE - European Research Council (ERC)

Total cost

€ 1 550 235,00

EU contribution

€ 1 550 235,00

Coordinated by

THE UNIVERSITY OF EDINBURGH
United Kingdom

CORDIS provides links to public deliverables and publications of HORIZON projects.

Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Publications

Peer reviewed articles (17)

Improved Reference Genome Uncovers Novel Sex-Linked Regions in the Guppy (Poecilia reticulata)

Author(s): Bonnie A Fraser, James R Whiting, Josephine R Paris, Cameron J Weadick, Paul J Parsons, Deborah Charlesworth, Roberta Bergero, Felix Bemm, Margarete Hoffmann, Verena A Kottler, Chang Liu, Christine Dreyer, Detlef Weigel
Published in: Genome Biology and Evolution, Issue 12/10, 2020, Page(s) 1789-1805, ISSN 1759-6653
Publisher: Oxford University Press
DOI: 10.1093/gbe/evaa187

PromethION sequencing and assembly of the genome of Micropoecilia picta, a fish with a highly degenerated Y chromosome

Author(s): D Charlesworth, C. Graham, U. Trivedi, J. Gardner and R. Bergero
Published in: Genome Biology and Evolution, 2021, Page(s) evab171, ISSN 1759-6653
Publisher: Oxford University Press
DOI: 10.1093/gbe/evab171

When and how do sex-inked regions become sex chromosomes

Author(s): D. Charlesworth
Published in: Evolution, 2021, Page(s) 569-581, ISSN 0014-3820
Publisher: Society for the Study of Evolution
DOI: 10.1111/evo.14196

Young sex chromosomes in plants and animals.

Author(s): Charlesworth, Deborah
Published in: Charlesworth , D 2019 , ' Young sex chromosomes in plants and animals ' , New Phytologist , vol. 224 , no. 3 . https://doi.org/10.1111/nph.16002, Issue 1, 2019, ISSN 0028-646X
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/nph.16002

Exaggerated heterochiasmy in a fish with sex-linked male coloration polymorphisms

Author(s): Roberta Bergero, Jim Gardner, Beth Bader, Lengxob Yong, Deborah Charlesworth
Published in: Proceedings of the National Academy of Sciences, Issue 116/14, 2019, Page(s) 6924-6931, ISSN 0027-8424
Publisher: National Academy of Sciences
DOI: 10.1073/pnas.1818486116

Some thoughts about the words we use for thinking about sex chromosome evolution

Author(s): D. Charlesworth
Published in: Philosophical Transactions of the Royal Society B: Biological Sciences, 2022, Page(s) rstb.2021.0314, ISSN 0962-8436
Publisher: Royal Society of London
DOI: 10.1098/rstb.2021.0314

Evidences for a role of two Y-specific genes in sex determination in Populus deltoides

Author(s): Liangjiao Xue, Huaitong Wu, Yingnan Chen, Xiaoping Li, Jing Hou, Jing Lu, Suyun Wei, Xiaogang Dai, Matthew S. Olson, Jianquan Liu, Mingxiu Wang, Deborah Charlesworth, Tongming Yin
Published in: Nature Communications, Issue 11/1, 2020, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-020-19559-2

Chromosome‐scale assembly of the genome of Salix dunnii reveals a male‐heterogametic sex determination system on chromosome 7

Author(s): Li He, Kai‐Hua Jia, Ren‐Gang Zhang, Yuan Wang, Tian‐Le Shi, Zhi‐Chao Li, Si‐Wen Zeng, Xin‐Jie Cai, Natascha Dorothea Wagner, Elvira Hörandl, Aline Muyle, Ke Yang, Deborah Charlesworth, Jian‐Feng Mao
Published in: Molecular Ecology Resources, 2021, ISSN 1755-098X
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/1755-0998.13362

Local adaptation and the evolution of inversions on sex chromosomes and autosomes

Author(s): Tim Connallon, Colin Olito, Ludovic Dutoit, Homa Papoli, Filip Ruzicka, Lengxob Yong
Published in: Philosophical Transactions of the Royal Society B: Biological Sciences, Issue 373/1757, 2018, Page(s) 20170423, ISSN 0962-8436
Publisher: Royal Society of London
DOI: 10.1098/rstb.2017.0423

The Guppy Sex Chromosome System and the Sexually Antagonistic Polymorphism Hypothesis for Y Chromosome Recombination Suppression

Author(s): Deborah Charlesworth
Published in: Genes, Issue 9/5, 2018, Page(s) 264, ISSN 2073-4425
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/genes9050264

Locating the sex determining region of linkage group 12 of guppy (Poecilia reticulata)

Author(s): Chay Graham; Deborah Charlesworth; Roberta Bergero; Lengxob Yong; Jim Gardner
Published in: G3, Issue 3, 2020, ISSN 2160-1836
Publisher: Genetics Society of America
DOI: 10.1101/2020.04.30.063420

The timing of genetic degeneration of sex chromosomes

Author(s): D. Charlesworth
Published in: Philosophical Transactions B., 2021, Page(s) rstb.2020.0093, ISSN 0962-8436
Publisher: Royal Society of London
DOI: 10.1098/rstb.2020.0093

How did the guppy Y chromosome evolve?

Author(s): Charlesworth, D., R. Bergero, C. Graham, J. Gardner and K. Keegan
Published in: PLoS Genetics, 2021, Page(s) 1009704 Ithis journal doesn't have page numbers), ISSN 1553-7404
Publisher: Public library of science
DOI: 10.1371/journal.pgen.1009704

Reply to Wright et al.: How to explain the absence of extensive Y-specific regions in the guppy sex chromosomes

Author(s): Roberta Bergero, Deborah Charlesworth
Published in: Proceedings of the National Academy of Sciences, Issue 116/26, 2019, Page(s) 12609-12610, ISSN 0027-8424
Publisher: National Academy of Sciences
DOI: 10.1073/pnas.1906633116

Sensory-based quantification of male colour patterns in Trinidadian guppies reveals no support for parallel phenotypic evolution in multivariate trait space

Author(s): Yong, L., Croft, D. P., Troscianko, J., Ramnarine, I. W., & Wilson, A. J.
Published in: Molecular Ecology, 2022, ISSN 0962-1083
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/mec.16039

Partial sex linkage and linkage disequilibrium on the guppy sex chromosome

Author(s): Lengxob Yong, Alastair Wilson, Darren Croft, Chay Graham, Deborah Charlesworth
Published in: Molecular Ecology, 2022, Page(s) 5524-5537, ISSN 0962-1083
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/mec.16674

Using GC content to compare recombination patterns on the sex chromosomes and autosomes of the guppy, Poecilia reticulata, and its close outgroup species

Author(s): Roberta Bergero; Lengxob Yong; Deborah Charlesworth; Chay Graham; Jim Gardner; Yexin Zhang
Published in: Molecular Biology and Evolution, Issue 1, 2020, ISSN 0737-4038
Publisher: Oxford University Press
DOI: 10.1101/2020.05.22.110635