Chromatin dynamics resolved by rapid protein labeling and bioorthogonal capture

Project Information

RAPID

Grant agreement ID: 715024

DOI 10.3030/715024

Project closed

EC signature date 7 December 2016

Start date 1 January 2017

End date 30 June 2022

Funded under

• EXCELLENT SCIENCE - European Research Council (ERC)

Total cost € 1 846 360,00

EU contribution € 1 846 360,00

Coordinated by

KAROLINSKA INSTITUTET
Sweden

CORDIS provides links to public deliverables and publications of HORIZON projects.

Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Publications

Peer reviewed articles (8)

Distinct transcription kinetics of pluripotent cell states

Author(s): Rui Shao; Banushree Kumar; Katja Lidschreiber; Michael Lidschreiber; Patrick Cramer; Simon J Elsässer
Published in: Molecular Systems Biology, Issue 2, 2022, ISSN 1744-4292
Publisher: Nature Publishing Group
DOI: 10.15252/msb.202110407

TET1 regulates gene expression and repression of endogenous retroviruses independent of DNA demethylation

Author(s): Paul Stolz; Angelo Salazar Mantero; Andrey Tvardovskiy; Enes Ugur; Lucas E Wange; Christopher B Mulholland; Yuying Cheng; Michael Wierer; Wolfgang Enard; Robert Schneider; Till Bartke; Heinrich Leonhardt; Simon J Elsässer; Sebastian Bultmann
Published in: Nucleic Acid Research, Issue 1, 2022, ISSN 0305-1048
Publisher: Oxford University Press
DOI: 10.1093/nar/gkac642

Evolution of epigenetic chromatin states

Author(s): Philip Yuk Kwong Yung, Simon J Elsässer
Published in: Current Opinion in Chemical Biology, Issue 41, 2017, Page(s) 36-42, ISSN 1367-5931
Publisher: Elsevier BV
DOI: 10.1016/j.cbpa.2017.10.001

Polycomb repressive complex 2 shields naïve human pluripotent cells from trophectoderm differentiation

Author(s): Banushree Kumar, Carmen Navarro, Nerges Winblad, John P. Schell, Cheng Zhao, Jere Weltner, Laura Baqué-Vidal, Angelo Salazar Mantero, Sophie Petropoulos, Fredrik Lanner & Simon J. Elsässer
Published in: Nature Cell Biology, 2022, ISSN 1465-7392
Publisher: Nature Publishing Group
DOI: 10.1038/s41556-022-00916-w

Engineered human induced pluripotent cells enable genetic code expansion in brain organoids

Author(s): Lea S. van Husen, Anna-Maria Katasori, Birthe Meineke, Lars O. Tjernberg, Sophia Schedin-Weiss, Simon J Elsässer
Published in: ChemBioChem, 2021, ISSN 1439-4227
Publisher: John Wiley & Sons Ltd.
DOI: 10.1002/cbic.202100399

Methanomethylophilus alvus Mx1201 Provides Basis for Mutual Orthogonal Pyrrolysyl tRNA/Aminoacyl-tRNA Synthetase Pairs in Mammalian Cells

Author(s): Birthe Meineke, Johannes Heimgärtner, Lorenzo Lafranchi, Simon J. Elsässer
Published in: ACS Chemical Biology, Issue 13/11, 2018, Page(s) 3087-3096, ISSN 1554-8929
Publisher: American Chemical Society
DOI: 10.1021/acschembio.8b00571

An embryonic stem cell-specific heterochromatin state promotes core histone exchange in the absence of DNA accessibility

Author(s): Carmen Navarro, Jing Lyu, Anna-Maria Katsori, Rozina Caridha, Simon J. Elsässer
Published in: Nature Communications, Issue 11/1, 2020, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-020-18863-1

Quantitative Multiplexed ChIP Reveals Global Alterations that Shape Promoter Bivalency in Ground State Embryonic Stem Cells

Author(s): Banushree Kumar, Simon J. Elsässer
Published in: Cell Reports, Issue 28/12, 2019, Page(s) 3274-3284.e5, ISSN 2211-1247
Publisher: Cell Press
DOI: 10.1016/j.celrep.2019.08.046

Other (1)

Polycomb Repressive Complex 2 shields naïve human pluripotent cells from trophectoderm differentiation

Author(s): Banushree Kumar, Carmen Navarro, Nerges Winblad, John P Schell, Cheng Zhao, Fredrik Lanner, Simon J Elsässer
Published in: bioRxiv preprint, 2021
Publisher: bioRxiv
DOI: 10.1101/2021.08.21.457215

Book chapters (1)

Generation of Stable Amber Suppression Cell Lines

Author(s): Simon J. Elsässer
Published in: Noncanonical Amino Acids, Issue 1728, 2018, Page(s) 237-245, ISBN 978-1-4939-7573-0
Publisher: Springer New York
DOI: 10.1007/978-1-4939-7574-7_15