Tracing Evolution of Auxin Transport and Polarity in Plants

Project Information

ETAP

Grant agreement ID: 742985

DOI

10.3030/742985

Project closed

EC signature date 18 August 2017

Start date 1 January 2018

End date 31 December 2022

Funded under

• EXCELLENT SCIENCE - European Research Council (ERC)

Total cost

€ 2 410 292,00

EU contribution

€ 2 410 292,00

Coordinated by

INSTITUTE OF SCIENCE AND TECHNOLOGY AUSTRIA
Austria

CORDIS provides links to public deliverables and publications of HORIZON projects.

Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Publications

Peer reviewed articles (43)

Endocytosis of BRASSINOSTEROID INSENSITIVE1 Is Partly Driven by a Canonical Tyr-Based Motif

Author(s): Derui Liu, Rahul Kumar, Lucas A.N. Claus, Alexander J. Johnson, Wei Siao, Isabelle Vanhoutte, Peng Wang, Kyle W. Bender, Klaas Yperman, Sara Martins, Xiuyang Zhao, Grégory Vert, Daniël Van Damme, Jiří Friml, Eugenia Russinova
Published in: The Plant Cell, Issue 32/11, 2020, Page(s) 3598-3612, ISSN 1040-4651
Publisher: American Society of Plant Biologists
DOI: 10.1105/tpc.20.00384

PIN-mediated polar auxin transport regulations in plant tropic responses.

Author(s): Huibin Han; Huibin Han; Maciek Adamowski; Linlin Qi; Saqer S. Alotaibi; Jiří Friml
Published in: New Phytologist, Issue 3, 2021, ISSN 0028-646x
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/nph.17617

Developmental roles of Auxin Binding Protein 1 in Arabidopsis thaliana

Author(s): Zuzana Gelová, Michelle Gallei, Markéta Pernisová, Géraldine Brunoud, Xixi Zhang, Matouš Glanc, Lanxin Li, Jaroslav Michalko, Zlata Pavlovičová, Inge Verstraeten, Huibin Han, Jakub Hajný, Robert Hauschild, Milada Čovanová, Marta Zwiewka, Lukas Hoermayer, Matyáš Fendrych, Tongda Xu, Teva Vernoux, Jiří Friml
Published in: Plant Science, Issue 303, 2021, Page(s) 110750, ISSN 0168-9452
Publisher: Elsevier BV
DOI: 10.1016/j.plantsci.2020.110750

ABP1-TMK auxin perception for global phosphorylation and auxin canalization

Author(s): 2. Friml J, Gallei M, Gelová Z, Johnson A, Mazur E, Monzer A, Rodriguez L, Roosjen M, Verstraeten I, Živanović BD, Zou M, Fiedler L, Giannini C, Grones P, Hrtyan M, Kaufmann WA, Kuhn A, Narasimhan M, Randuch M, Rýdza N, Takahashi K, Tan S, Teplova A, Kinoshita T, Weijers D, Rakusová H.
Published in: Nature, 2022, ISSN 0028-0836
Publisher: Nature Publishing Group
DOI: 10.1038/s41586-022-05187-x

Auxin analog-induced Ca2+ signaling is independent of inhibition of endosomal aggregation in Arabidopsis roots

Author(s): 3. Wang R, Himschoot E, Grenzi M, Chen J, Safi A, Krebs M, Schumacher K, Nowack MK, Moeder W, Yoshioka K, Van Damme D, De Smet I, Geelen D, Beeckman T, Friml J, Costa A, Vanneste S.
Published in: Journal of Experimental Botany, 2022, ISSN 0022-0957
Publisher: Oxford University Press
DOI: 10.1093/jxb/erac019

Pho-view of Auxin: Reversible Protein Phosphorylation in Auxin Biosynthesis, Transport and Signaling

Author(s): Shutang Tan, Christian Luschnig, Jiří Friml
Published in: Molecular Plant, Issue 14/1, 2021, Page(s) 151-165, ISSN 1674-2052
Publisher: Oxford University Press
DOI: 10.1016/j.molp.2020.11.004

INDITTO2 transposon conveys auxin-mediated DRO1 transcription for rice drought avoidance

Author(s): 8. Zhao Y, Wu L, Fu Q, Wang D, Li J, Yao B, Yu S, Jiang L, Qian J, Zhou X, Han L, Zhao S, Ma C, Zhang Y, Luo C, Dong Q, Li S, Zhang L, Jiang X, Li Y, Luo H, Li K, Yang J, Luo Q, Li L, Peng S, Huang H, Zuo Z, Liu C, Wang L, Li C, He X, Friml J, Du Y
Published in: Plant, Cell & Environment, 2021, ISSN 0140-7791
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/pce.14029

Adenylate cyclase activity of TIR1/AFB auxin receptors in plants

Author(s): 1. Qi L, Kwiatkowski M, Chen H, Hoermayer L, Sinclair S, Zou M, del Genio C, Kubeš M, Napier R, Jaworski K, Friml J
Published in: Nature, 2022, ISSN 0028-0836
Publisher: Nature Publishing Group
DOI: 10.1038/s41586-022-05369-7

AGC kinases and MAB4/MEL proteins maintain PIN polarity by limiting lateral diffusion in plant cells

Author(s): 7. Glanc M, Van Gelderen K, Hoermayer L, Tan S, Naramoto S, Zhang X, Domjan D, Včelařová L, Hauschild R, Johnson A, de Koning E, van Dop M, Rademacher E, Janson S, Wei X, Molnár G, Fendrych M, De Rybel B, Offringa R, Friml J
Published in: Current Biology, 2021, ISSN 0960-9822
Publisher: Cell Press
DOI: 10.1016/j.cub.2021.02.028

Cell surface and intracellular auxin signalling for H+ fluxes in root growth

Author(s): 4. Li L, Verstraeten I, Roosjen M, Takahashi K, Rodriguez L, Merrin J, Chen J, Shabala L, Smet W, Ren H, Vanneste S, Shabala S, De Rybel B, Weijers D, Kinoshita T, Gray WM, Friml J.
Published in: Nature, 2021, ISSN 0028-0836
Publisher: Nature Publishing Group
DOI: 10.1038/s41586-021-04037-6

Cell-surface receptors enable perception of extracellular cytokinins

Author(s): Ioanna Antoniadi, Ondřej Novák, Zuzana Gelová, Alexander Johnson, Ondřej Plíhal, Radim Simerský, Václav Mik, Thomas Vain, Eduardo Mateo-Bonmatí, Michal Karady, Markéta Pernisová, Lenka Plačková, Korawit Opassathian, Jan Hejátko, Stéphanie Robert, Jiří Friml, Karel Doležal, Karin Ljung, Colin Turnbull
Published in: Nature Communications, Issue 11/1, 2020, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-020-17700-9

Cellular requirements for PIN polar cargo clustering in Arabidopsis thaliana

Author(s): Hongjiang Li, Daniel Wangenheim, Xixi Zhang, Shutang Tan, Nasser Darwish‐Miranda, Satoshi Naramoto, Krzysztof Wabnik, Riet De Rycke, Walter A. Kaufmann, Daniel Gütl, Ricardo Tejos, Peter Grones, Meiyu Ke, Xu Chen, Jan Dettmer, Jiří Friml
Published in: New Phytologist, Issue 229/1, 2021, Page(s) 351-369, ISSN 0028-646X
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/nph.16887

Relative Contribution of PIN-Containing Secretory Vesicles and Plasma Membrane PINs to the Directed Auxin Transport: Theoretical Estimation

Author(s): Sander Hille, Maria Akhmanova, Matouš Glanc, Alexander Johnson, Jiří Friml
Published in: International Journal of Molecular Sciences, Issue 19/11, 2018, Page(s) 3566, ISSN 1422-0067
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ijms19113566

PID/WAG-mediated phosphorylation of the Arabidopsis PIN3 auxin transporter mediates polarity switches during gravitropism

Author(s): Peter Grones, Melinda Abas, Jakub Hajný, Angharad Jones, Sascha Waidmann, Jürgen Kleine-Vehn, Jiří Friml
Published in: Scientific Reports, Issue 8/1, 2018, ISSN 2045-2322
Publisher: Nature Publishing Group
DOI: 10.1038/s41598-018-28188-1

Re-activation of Stem Cell Pathways for Pattern Restoration in Plant Wound Healing

Author(s): Petra Marhava, Lukas Hoermayer, Saiko Yoshida, Peter Marhavý, Eva Benková, Jiří Friml
Published in: Cell, Issue 177/4, 2019, Page(s) 957-969.e13, ISSN 0092-8674
Publisher: Cell Press
DOI: 10.1016/j.cell.2019.04.015

PIN2 Polarity Establishment in Arabidopsis in the Absence of an Intact Cytoskeleton

Author(s): Matouš Glanc, Matyáš Fendrych, Jiří Friml
Published in: Biomolecules, Issue 9/6, 2019, Page(s) 222, ISSN 2218-273X
Publisher: Multidisciplinary Digital Publishing Institute
DOI: 10.3390/biom9060222

Pinstatic Acid Promotes Auxin Transport by Inhibiting PIN Internalization

Author(s): Akihiro Oochi, Jakub Hajny, Kosuke Fukui, Yukio Nakao, Michelle Gallei, Mussa Quareshy, Koji Takahashi, Toshinori Kinoshita, Sigurd Ramans Harborough, Stefan Kepinski, Hiroyuki Kasahara, Richard Napier, Jiří Friml, Ken-ichiro Hayashi
Published in: Plant Physiology, Issue 180/2, 2019, Page(s) 1152-1165, ISSN 0032-0889
Publisher: American Society of Plant Biologists
DOI: 10.1104/pp.19.00201

Mechanistic framework for cell-intrinsic re-establishment of PIN2 polarity after cell division

Author(s): Matouš Glanc, Matyáš Fendrych, Jiří Friml
Published in: Nature Plants, Issue 4/12, 2018, Page(s) 1082-1088, ISSN 2055-0278
Publisher: Nature Publishing Group
DOI: 10.1038/s41477-018-0318-3

TMK1-mediated auxin signalling regulates differential growth of the apical hook

Author(s): Min Cao, Rong Chen, Pan Li, Yongqiang Yu, Rui Zheng, Danfeng Ge, Wei Zheng, Xuhui Wang, Yangtao Gu, Zuzana Gelová, Jiří Friml, Heng Zhang, Renyi Liu, Jun He, Tongda Xu
Published in: Nature, Issue 568/7751, 2019, Page(s) 240-243, ISSN 0028-0836
Publisher: Nature Publishing Group
DOI: 10.1038/s41586-019-1069-7

The Inhibitor Endosidin 4 Targets SEC7 Domain-Type ARF GTPase Exchange Factors and Interferes with Subcellular Trafficking in Eukaryotes

Author(s): Urszula Kania, Tomasz Nodzyński, Qing Lu, Glenn R. Hicks, Wim Nerinckx, Kiril Mishev, François Peurois, Jacqueline Cherfils, Riet De Rycke, Peter Grones, Stéphanie Robert, Eugenia Russinova, Jiří Friml
Published in: The Plant Cell, Issue 30/10, 2018, Page(s) 2553-2572, ISSN 1040-4651
Publisher: American Society of Plant Biologists
DOI: 10.1105/tpc.18.00127

The Chara Genome: Secondary Complexity and Implications for Plant Terrestrialization

Author(s): Tomoaki Nishiyama, Hidetoshi Sakayama, Jan de Vries, Henrik Buschmann, Denis Saint-Marcoux, Kristian K. Ullrich, Fabian B. Haas, Lisa Vanderstraeten, Dirk Becker, Daniel Lang, Stanislav Vosolsobě, Stephane Rombauts, Per K.I. Wilhelmsson, Philipp Janitza, Ramona Kern, Alexander Heyl, Florian Rümpler, Luz Irina A. Calderón Villalobos, John M. Clay, Roman Skokan, Atsushi Toyoda, Yutaka Suzuki, Hir
Published in: Cell, Issue 174/2, 2018, Page(s) 448-464.e24, ISSN 0092-8674
Publisher: Cell Press
DOI: 10.1016/j.cell.2018.06.033

Evolution of fast root gravitropism in seed plants

Author(s): Yuzhou Zhang, Guanghui Xiao, Xiaojuan Wang, Xixi Zhang, Jiří Friml
Published in: Nature Communications, Issue 10/1, 2019, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-019-11471-8

Targeted cell ablation-based insights into wound healing and restorative patterning

Author(s): Lukas Hoermayer, Jiří Friml
Published in: Current Opinion in Plant Biology, Issue 52, 2019, Page(s) 124-130, ISSN 1369-5266
Publisher: Elsevier BV
DOI: 10.1016/j.pbi.2019.08.006

Clathrin-mediated trafficking and PIN trafficking are required for auxin canalization and vascular tissue formation in Arabidopsis

Author(s): Ewa Mazur, Michelle Gallei, Maciek Adamowski, Huibin Han, Hélène S. Robert, Jiří Friml
Published in: Plant Science, Issue 293, 2020, Page(s) 110414, ISSN 0168-9452
Publisher: Elsevier BV
DOI: 10.1016/j.plantsci.2020.110414

Auxin signalling in growth: Schrödinger’s cat out of the bag

Author(s): Michelle Gallei, Christian Luschnig, Jiří Friml
Published in: Current Opinion in Plant Biology, Issue 53, 2020, Page(s) 43-49, ISSN 1369-5266
Publisher: Elsevier BV
DOI: 10.1016/j.pbi.2019.10.003

Salicylic Acid Targets Protein Phosphatase 2A to Attenuate Growth in Plants

Author(s): Shutang Tan, Melinda Abas, Inge Verstraeten, Matouš Glanc, Gergely Molnár, Jakub Hajný, Pavel Lasák, Ivan Petřík, Eugenia Russinova, Jan Petrášek, Ondřej Novák, Jiří Pospíšil, Jiří Friml
Published in: Current Biology, Issue 30/3, 2020, Page(s) 381-395.e8, ISSN 0960-9822
Publisher: Cell Press
DOI: 10.1016/j.cub.2019.11.058

Auxin guides roots to avoid obstacles during gravitropic growth

Author(s): Yuzhou Zhang, Jiří Friml
Published in: New Phytologist, Issue 225/3, 2020, Page(s) 1049-1052, ISSN 0028-646X
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/nph.16203

PIN-driven auxin transport emerged early in streptophyte evolution

Author(s): Roman Skokan, Eva Medvecká, Tom Viaene, Stanislav Vosolsobě, Marta Zwiewka, Karel Müller, Petr Skůpa, Michal Karady, Yuzhou Zhang, Dorina P. Janacek, Ulrich Z. Hammes, Karin Ljung, Tomasz Nodzyński, Jan Petrášek, Jiří Friml
Published in: Nature Plants, Issue 5/11, 2019, Page(s) 1114-1119, ISSN 2055-0278
Publisher: Nature Research
DOI: 10.1038/s41477-019-0542-5

Evolutionarily unique mechanistic framework of clathrin-mediated endocytosis in plants

Author(s): Madhumitha Narasimhan, Alexander Johnson, Roshan Prizak, Walter Anton Kaufmann, Shutang Tan, Barbara Casillas-Pérez, Jiří Friml
Published in: eLife, Issue 9, 2020, ISSN 2050-084X
Publisher: eLife Sciences Publications
DOI: 10.7554/elife.52067

Auxin canalization and vascular tissue formation by TIR1/AFB‐mediated auxin signaling in Arabidopsis

Author(s): Ewa Mazur, Ivan Kulik, Jakub Hajný, Jiří Friml
Published in: New Phytologist, Issue 226/5, 2020, Page(s) 1375-1383, ISSN 0028-646X
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/nph.16446

The lipid code-dependent phosphoswitch PDK1–D6PK activates PIN-mediated auxin efflux in Arabidopsis

Author(s): Shutang Tan, Xixi Zhang, Wei Kong, Xiao-Li Yang, Gergely Molnár, Zuzana Vondráková, Roberta Filepová, Jan Petrášek, Jiří Friml, Hong-Wei Xue
Published in: Nature Plants, Issue 6/5, 2020, Page(s) 556-569, ISSN 2055-0278
Publisher: Nature Research
DOI: 10.1038/s41477-020-0648-9

Arabidopsis Flippases Cooperate with ARF GTPase Exchange Factors to Regulate the Trafficking and Polarity of PIN Auxin Transporters

Author(s): Xixi Zhang, Maciek Adamowski, Petra Marhava, Shutang Tan, Yuzhou Zhang, Lesia Rodriguez, Marta Zwiewka, Vendula Pukyšová, Adrià Sans Sánchez, Vivek Kumar Raxwal, Christian S. Hardtke, Tomasz Nodzyński, Jiří Friml
Published in: The Plant Cell, Issue 32/5, 2020, Page(s) 1644-1664, ISSN 1040-4651
Publisher: American Society of Plant Biologists
DOI: 10.1105/tpc.19.00869

Directional auxin fluxes in plants by intramolecular domain–domain coevolution of PIN auxin transporters

Author(s): Yuzhou Zhang, Corinna Hartinger, Xiaojuan Wang, Jiří Friml
Published in: New Phytologist, Issue 227/5, 2020, Page(s) 1406-1416, ISSN 0028-646X
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/nph.16629

SCF TIR1 /AFB Auxin Signaling for Bending Termination during Shoot Gravitropism

Author(s): Huibin Han, Hana Rakusová, Inge Verstraeten, Yuzhou Zhang, Jiří Friml
Published in: Plant Physiology, Issue 183/1, 2020, Page(s) 37-40, ISSN 0032-0889
Publisher: American Society of Plant Biologists
DOI: 10.1104/pp.20.00212

Wounding-induced changes in cellular pressure and localized auxin signalling spatially coordinate restorative divisions in roots

Author(s): Lukas Hoermayer, Juan Carlos Montesinos, Petra Marhava, Eva Benková, Saiko Yoshida, Jiří Friml
Published in: Proceedings of the National Academy of Sciences, Issue 117/26, 2020, Page(s) 15322-15331, ISSN 0027-8424
Publisher: National Academy of Sciences
DOI: 10.1073/pnas.2003346117

Receptor kinase module targets PIN-dependent auxin transport during canalization

Author(s): Jakub Hajný; Jakub Hajný; Tomáš Prát; Nikola Rydza; Lesia Rodriguez; Shutang Tan; Inge Verstraeten; David Domjan; Ewa Mazur; Ewa Mazur; Elwira Smakowska-Luzan; Elwira Smakowska-Luzan; Wouter Smet; Eliana Mor; Jonah Nolf; Bao-Jun Yang; Wim Grunewald; Gergely Molnár; Gergely Molnár; Youssef Belkhadir; Bert De Rybel; Jiří Friml
Published in: Science, Issue 4, 2020, ISSN 0036-8075
Publisher: American Association for the Advancement of Science
DOI: 10.1126/science.aba3178

Functional innovations of PIN auxin transporters mark crucial evolutionary transitions during rise of flowering plants

Author(s): Yuzhou Zhang, Lesia Rodriguez, Lanxin Li, Xixi Zhang, Jiří Friml
Published in: Science Advances, Issue 6/50, 2020, Page(s) eabc8895, ISSN 2375-2548
Publisher: American Association for the Advancement of Science
DOI: 10.1126/sciadv.abc8895

Auxin-mediated statolith production for root gravitropism

Author(s): 31. Zhang Y, He P, Ma X, Yang Z, Pang C, Yu J, Wang G, Friml J, Xiao G.
Published in: New Phytologist, 2019, ISSN 0028-646x
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/nph.15932

Systematic analysis of specific and nonspecific auxin effects on endocytosis and trafficking

Author(s): 6. Narasimhan M, Gallei M, Tan S, Johnson A, Verstraeten I, Li L, Rodriguez L, Han H, Himschoot E, Wang R, Vanneste S, Sánchez-Simarro J, Aniento F, Adamowski M, Friml J
Published in: Plant Physiology, 2021, ISSN 0032-0889
Publisher: American Society of Plant Biologists
DOI: 10.1093/plphys/kiab134

Synaptotagmins at the endoplasmic reticulum-plasma membrane contact sites maintain diacylglycerol homeostasis during abiotic stress

Author(s): 5. Ruiz-Lopez N, Pérez-Sancho J, Esteban Del Valle A, Haslam RP, Vanneste S, Catalá R, Perea-Resa C, Van Damme D, García-Hernández S, Albert A, Vallarino J, Lin J, Friml J, Macho AP, Salinas J, Rosado A, Napier JA, Amorim-Silva V, Botella MA.
Published in: Plant Cell, 2021, ISSN 1040-4651
Publisher: American Society of Plant Biologists
DOI: 10.1093/plcell/koab122

Naphthylphthalamic acid associates with and inhibits PIN auxin transporters

Author(s): Lindy Abas, Martina Kolb, Johannes Stadlmann, Dorina P. Janacek, Kristina Lukic, Claus Schwechheimer, Leonid A. Sazanov, Lukas Mach, Jiří Friml, Ulrich Z. Hammes
Published in: Proceedings of the National Academy of Sciences, Issue 118/1, 2020, Page(s) e2020857118, ISSN 0027-8424
Publisher: National Academy of Sciences
DOI: 10.1073/pnas.2020857118

Strigolactones inhibit auxin feedback on PIN-dependent auxin transport canalization.

Author(s): Jing Zhang; Ewa Mazur; Ewa Mazur; Jozef Balla; Jozef Balla; Michelle Gallei; Petr Kalousek; Zuzana Medveďová; Yang Li; Yaping Wang; Tomáš Prát; Mina Vasileva; Vilém Reinöhl; Stanislav Procházka; Rostislav Halouzka; Petr Tarkowski; Christian Luschnig; Philip B. Brewer; Jiří Friml
Published in: Nature Communications, Issue 1, 2020, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-020-17252-y

Non-steroidal Anti-inflammatory Drugs Target TWISTED DWARF1-Regulated Actin Dynamics and Auxin Transport-Mediated Plant Development

Author(s): Shutang Tan, Martin Di Donato, Matouš Glanc, Xixi Zhang, Petr Klíma, Jie Liu, Aurélien Bailly, Noel Ferro, Jan Petrášek, Markus Geisler, Jiří Friml
Published in: Cell Reports, Issue 33/9, 2020, Page(s) 108463, ISSN 2211-1247
Publisher: Cell Press
DOI: 10.1016/j.celrep.2020.108463

Book chapters (1)

Evaluation of gravitropism in non-seed plants

Author(s): 41. Zhang Y, Li L, Friml J.
Published in: 2021, ISBN 978-1-0716-1676-5
Publisher: Springer Nature
DOI: 10.1007/978-1-0716-1677-2_2

Other (1)

Rapid and reversible root growth inhibition by TIR1 auxin signalling

Author(s): 40. Fendrych M, Akhmanova M, Merrin J, Glanc M, Hagihara S, Takahashi K, Uchida N, Torii KU, Friml J.
Published in: Nature Plants, 2018
Publisher: Springer Nature
DOI: 10.1038/s41477-018-0190-1