Structure-activity relationships of an emerging family of fungal lytic polysaccharide monooxygenases

Project Information

ARTFUL

Grant agreement ID: 748758

DOI

10.3030/748758

Project closed

EC signature date 6 March 2017

Start date 1 April 2017

End date 31 March 2019

Funded under

• EXCELLENT SCIENCE - Marie Skłodowska-Curie Actions

Total cost

€ 173 076,00

EU contribution

€ 173 076,00

Coordinated by

UNIVERSITE D'AIX MARSEILLE
France

Periodic Reporting for period 1 - ARTFUL (Structure-activity relationships of an emerging family of fungal lytic polysaccharide monooxygenases)

Reporting period: 2017-04-01 to 2019-03-31

Summary of the context and overall objectives of the project

Sustainable production of fuels and chemicals from biomass (e.g. wood, straw…) is essential considering the societal and political demands for alternatives to petrochemical commodities. The main steps to obtain fuel from biomass include degrading biomass into simple molecules, and this achieved by enzymatic degradation. This step is however one of the major bottlenecks to achieve economically viable processes. Indeed, the very complex structure and heterogeneous composition of wood and other plants makes it difficult to degrade by available enzyme cocktails. In nature, filamentous fungi are among the most effective degraders of lignocellulosic biomass highlighting their potential as a source of novel and highly efficient carbohydrate-active enzymes. In this context, the Artful project main objective was to identify new enzymes with high potential of unlocking the conversion of biomass.

Work performed from the beginning of the project to the end of the period covered by the report and main results achieved so far

To uncover enzyme candidates, the approach consisted in the exploration of the enzyme composition of secretomes produced when fungi are cultured on lignocellulosic substrates. The exploration comprised genomic, transcriptomic and proteomic data analyses. One of the major results of Artful is the identification of new families of proteins of which nothing was known before the project. They were identified in the enzyme cocktails produced by cellulolytic fungi. Following their discovery, several proteins of these new families were cloned and produced to evaluate their exact activity. The biochemical characterization that was performed revealed an oxidative mode of action, which is copper-dependent and confirmed the activity of these enzymes, classified thereby as Lytic Polysaccharide MonoOxygenases (LPMOs). Also, the Artful project enabled to extend the study of these enzymes to their biological role, the first of its kind in the LPMO field. The benefits of the exploitation of R&D results are patented (n° EP18306418). Also, The Artful project enable me to attend several Scientific Conferences:
- GRC on Carbohydrate-active Enzymes for Glycan Conversions, Andover (USA), July 2019. Invited speaker.
- 13th Carbohydrate Bioengineering Meeting, Toulouse (France), May 2019. Poster
- 2nd LPMO Symposium, Marseille (France), November 2018. Oral presentation
- 14th European Conference on Fungal Genetics (ECFG14) Haifa (Israël), February 2018. Oral presentation

Progress beyond the state of the art and expected potential impact (including the socio-economic impact and the wider societal implications of the project so far)

Overall, the Artful project combined to genetics studies driven by Dennis Thiele (Duke University School of Medicine, Durham, USA) shift the landscape of the LPMO field from a purely lignocellulolytic context, where they are used as enzymatic tools, to a better understanding of their biological role in vivo, especially, their involvement in copper homeostasis and virulence. Thus, it impacts a wide range of areas of expertise (plant pathogens, plant/fungal symbiosis, fungal human pathogens…).

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