MicroRNA functions in single cells

Project Information

miRCell

Grant agreement ID: 758397

DOI

10.3030/758397

Project closed

EC signature date 15 November 2017

Start date 1 March 2018

End date 28 February 2023

Funded under

• EXCELLENT SCIENCE - European Research Council (ERC)

Total cost

€ 1 497 650,02

EU contribution

€ 1 497 650,02

Coordinated by

STOCKHOLMS UNIVERSITET
Sweden

CORDIS provides links to public deliverables and publications of HORIZON projects.

Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Publications

Other (1)

agoTRIBE detects miRNA-target interactions transcriptome-wide in single cells

Author(s): Vaishnovi Sekar, Emilio Mármol-Sánchez, Panagiotis Kalogeropoulos, Laura Stanicek, Eduardo A. Sagredo, Evangelos Doukoumopoulos, Franziska Bonath, Inna Biryukova, Marc R. Friedländer
Published in: bioRxiv, 2022
Publisher: bioRxiv
DOI: 10.1101/2022.08.10.503472

Peer reviewed articles (6)

MirGeneDB 2.1: toward a complete sampling of all major animal phyla.

Author(s): "Fromm, Bastian; Hø ye, Eirik; Domanska, Diana; Zhong, Xiangfu; Aparicio-Puerta, Ernesto; Ovchinnikov, Vladimir; Umu, Sinan U; Chabot, Peter J; Kang, Wenjing; Aslanzadeh, Morteza; Tarbier, Marcel; Má rmol-Sá nchez, Emilio; Urgese, Gianvito; Johansen, Morten; Hovig, Eivind; Hackenberg, Michael; Friedlä nder, Marc R; Peterson, Kevin J"
Published in: Nucleic Acids Research, Issue 13624962, 2022, ISSN 1362-4962
Publisher: Oxford academic
DOI: 10.1093/nar/gkab1101

Nuclear gene proximity and protein interactions shape transcript covariations in mammalian single cells

Author(s): Marcel Tarbier, Sebastian D. Mackowiak, João Frade, Silvina Catuara-Solarz, Inna Biryukova, Eleni Gelali, Diego Bárcena Menéndez, Luis Zapata, Stephan Ossowski, Magda Bienko, Caroline J. Gallant, Marc R. Friedländer
Published in: Nature Communications, Issue 11/1, 2020, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-020-19011-5

MapToCleave: high-throughput profiling of microRNA biogenesis in living cells

Author(s): Wenjing Kang; Bastian Fromm; Anna J.S. Houben; Eirik Høye; Daniela Bezdan; Carme Arnan; Kim Thrane; Michaela Asp; Rory Johnson; Inna Biryukova; Marc R. Friedländer
Published in: Cell Reports, 2021, ISSN 2211-1247
Publisher: Cell Press
DOI: 10.48350/162005

The SWI/SNF subunit BRG1 affects alternative splicing by changing RNA binding factor interactions with nascent RNA

Author(s): Antoni Gañez-Zapater; Sebastian D. Mackowiak; Yuan Guo; Marcel Tarbier; Antonio Jordán-Pla; Marc R. Friedländer; Neus Visa; Ann-Kristin Östlund Farrants
Published in: Molecular Genetics and Genomics, 2022, ISSN 1617-4615
Publisher: Springer Verlag
DOI: 10.1007/s00438-022-01863-9

Combined mRNA and protein single cell analysis in a dynamic cellular system using SPARC

Author(s): Johan Reimegård; Marcus Danielsson; Marcel Tarbier; Jens Schuster; Sathishkumar Baskaran; Styliani Panagiotou; Niklas Dahl; Marc R. Friedländer; Caroline J. Gallant
Published in: Nature Communications Biology, 2021, ISSN 2399-3642
Publisher: NPG
DOI: 10.1038/s42003-021-02142-w

Cytoplasmic protein misfolding titrates Hsp70 to activate nuclear Hsf1

Author(s): Anna E Masser; Wenjing Kang; Joydeep Roy; Jayasankar Mohanakrishnan Kaimal; Jany Quintana-Cordero; Marc R Friedländer; Claes Andréasson
Published in: eLife, 2019, ISSN 2050-084X
Publisher: eLife Sciences Publications
DOI: 10.7554/elife.47791