Advancing the non-invasive assessment of brain communication in neurological disease

Joint Hierarchical Bayesian Learning of Sources and Noise for M/EEG Brain Source Imaging

Auteurs: Ali Hashemi, Chang Cai, Yijing Gao, Sanjay Ghosh, Klaus-Robert Müller, Srikantan S. Nagara- jan, Stefan Haufe
Publié dans: Abstracts of Neural Traces 2024 - Advanced M/EEG Methods and Clinical Applications Workshop, 2025
Éditeur: TU Berlin

A state-space model for inferring effective connectivity of latent neural dynamics from simultaneous EEG/fMRI

Auteurs: Tao Tu, John Paisley, Stefan Haufe, Paul Sajda
Publié dans: Advances in Neural Information Processing Systems, Numéro 32, 2019, Page(s) 4662-4671
Éditeur: Neural Information Processing Systems

Integrating subdural EEG-derived spectral and functional connectivity features of focal seizures to improve delineation of the epileptogenic zone

Auteurs: Margarita Sison, Kara Götz, Tin Jurhar, Martin Holtkamp, Bernd Vorderwülbecke, Stefan Haufe
Publié dans: Abstracts of Neural Traces 2024 - Advanced M/EEG Methods and Clinical Applications Workshop, 2025
Éditeur: TU Berlin

ROIconnect: An open-source EEGLAB plugin for linear and non-linear functional connectivity analysis between brain source regions of interest

Auteurs: Tien Dung Nguyen, Franziska Pellegrini, Zixuan Liu, Arnaud Delorme, Stefan Haufe
Publié dans: Abstracts of Neural Traces 2024 - Advanced M/EEG Methods and Clinical Applications Workshop, 2025
Éditeur: TU Berlin

The effect of whitening on explanation performance

Auteurs: Benedict Clark, Stoyan Karastoyanov, Rick Wilming, Stefan Haufe
Publié dans: IAI Workshop @ NeurIPS 2024, 2024
Éditeur: Neural Information Processing Systems Foundation

Distinguishing between- from within-site phase-amplitude coupling using antisymmetrized bispectra

Auteurs: Franziska Pellegrini, Tien Dung Nguyen, Taliana Herrera, Vadim Nikulin, Guido Nolte, Stefan Haufe
Publié dans: Abstracts of Neural Traces 2024 - Advanced M/EEG Methods and Clinical Applications Workshop, 2025
Éditeur: TU Berlin

Understanding brain function development and heterogeneity using normative modeling in a pediatric rs-EEG dataset

Auteurs: Nikita Agarwal, Tzvetan Popov, Marius Tröndle, Nicolas Langer, Stefan Haufe
Publié dans: Abstracts of Neural Traces 2024 - Advanced M/EEG Methods and Clinical Applications Workshop, 2025
Éditeur: TU Berlin

Evaluating the reconstruction of complex network measures of functional brain connectivity from M/EEG data

Auteurs: Veronika Shamova, Subhi Arafat, Stefan Haufe
Publié dans: Abstracts of Neural Traces 2024 - Advanced M/EEG Methods and Clinical Applications Workshop, 2025
Éditeur: TU Berlin

Robustly Estimating Transmission Time Delays under Mixed Noise Influence with Novel Cross- and Bispectrum Methods

Auteurs: Tin Jurhar, Franziska Pellegrini, Ana I. Nunes del Toro, Guido Nolte, Stefan Haufe
Publié dans: Abstracts of Neural Traces 2024 - Advanced M/EEG Methods and Clinical Applications Workshop, 2025
Éditeur: TU Berlin

Multivariate connectivity methods in the MNE-Python toolbox

Auteurs: Thomas S. Binns, Mohammad Orabe, Tien Dung Nguyen, Richard M. Köhler, Franziska Pellegrini, Stefan Haufe
Publié dans: Abstracts of Neural Traces 2024 - Advanced M/EEG Methods and Clinical Applications Workshop, 2025
Éditeur: TU Berlin

Theoretical Behavior of XAI Methods in the Presence of Suppressor Variables

Auteurs: Wilming, Rick; Kieslich, Leo; Clark, Benedict; Haufe, Stefan
Publié dans: Proceedings of the 40th International Conference on Machine Learning, PMLR, Numéro 202, 2023, Page(s) 37091-37107
Éditeur: PMLR
DOI: 10.48550/arxiv.2306.01464

Investigating the effect of noise-level misspecification in M/EEG inverse solutions

Auteurs: Anuja Negi, Stefan Haufe, Alexandre Gramfort, Ali Hashemi
Publié dans: Abstracts of Neural Traces 2024 - Advanced M/EEG Methods and Clinical Applications Workshop, 2025
Éditeur: TU Berlin

The normal ranges of robust MEG functional connectomes as functions of age and gender

Auteurs: Veronika Shamova, Elena Cesnaite, Vadim Nikulin, Stefan Haufe
Publié dans: Abstracts of Neural Traces 2024 - Advanced M/EEG Methods and Clinical Applications Workshop, 2025
Éditeur: TU Berlin

Position: XAI needs formal notions of explanation correctness

Auteurs: Stefan Haufe, Rick Wilming, Benedict Clark, Rustam Zhumagambetov, Danny Panknin, Ahcène Boubekki
Publié dans: IAI Workshop @ NeurIPS 2024, 2024
Éditeur: Neural Information Processing Systems Foundation

Efficient hierarchical Bayesian inference for spatio-temporal regression models in neuroimaging

Auteurs: Ali Hashemi, Yijing Gao, Chang Cai, Sanjay Ghosh, Klaus Robert Muller, Srikantan Nagarajan, Stefan Haufe
Publié dans: Advances in Neural Information Processing Systems, Numéro 34, 2021
Éditeur: Neural Information Processing Systems

PyBispectra: an open-source toolbox for advanced electrophysiological signal processing using the bispectrum

Auteurs: Thomas S. Binns, Franziska Pellegrini, Tin Jurhar, Stefan Haufe
Publié dans: Abstracts of Neural Traces 2024 - Advanced M/EEG Methods and Clinical Applications Workshop, 2025
Éditeur: TU Berlin

Enhancing Brain Source Reconstruction Through Pseudo-Inverse Initialization and 3D Neural Networks

Auteurs: Marco Morik, Ali Hashemi, Klaus-Robert Müller, Stefan Haufe, Shinichi Nakajima
Publié dans: Abstracts of Neural Traces 2024 - Advanced M/EEG Methods and Clinical Applications Workshop, 2025
Éditeur: TU Berlin

Correlated Components Analysis - Extracting Reliable Dimensions in Multivariate Data

Auteurs: Lucas C. Parra, Stefan Haufe, Jacek P. Dmochowski
Publié dans: Neurons, Behavior, Data analysis, and Theory, Numéro 2, 2024, ISSN 2690-2664
Éditeur: NBDT
DOI: 10.51628/001c.7125

Identifying good practices for detecting inter-regional linear functional connectivity from EEG

Auteurs: Franziska Pellegrini; Arnaud Delorme; Vadim Nikulin; Stefan Haufe
Publié dans: NeuroImage, Numéro 277, 2023, Page(s) 120218, ISSN 1095-9572
Éditeur: 1053-8119
DOI: 10.1101/2022.10.05.510753

Machine learning models predict the emergence of depression in Argentinean college students during periods of COVID-19 quarantine

Auteurs: Lorena Cecilia López Steinmetz, Margarita Sison, Rustam Zhumagambetov, Juan Carlos Godoy, Stefan Haufe
Publié dans: Frontiers in Psychiatry, Numéro 15, 2024, ISSN 1664-0640
Éditeur: Frontiers Research Foundation
DOI: 10.3389/fpsyt.2024.1376784

Performance reserves in brain-imaging-based phenotype prediction

Auteurs: Marc-Andre Schulz; Danilo Bzdok; Stefan Haufe; John-Dylan Haynes; Kerstin Ritter
Publié dans: Cell Reports, Numéro 43(1), 2024, Page(s) 113597, ISSN 2639-1856
Éditeur: Cell Press
DOI: 10.1016/j.celrep.2023.113597

Benchmarking the influence of pre-training on explanation performance in MR image classification

Auteurs: Marta Oliveira; Rick Wilming; Benedict Clark; Céline Budding; Fabian Eitel; Kerstin Ritter; Stefan Haufe; Stefan Haufe; Stefan Haufe
Publié dans: Frontiers in Artificial Intelligence, Numéro 7, 2024, Page(s) 1330919, ISSN 2624-8212
Éditeur: FrontiersIn
DOI: 10.3389/frai.2024.1330919

XAI-TRIS: non-linear image benchmarks to quantify false positive post-hoc attribution of feature importance

Auteurs: Benedict Clark, Rick Wilming, Stefan Haufe
Publié dans: Machine Learning, Numéro 113, 2024, Page(s) 6871-6910, ISSN 0885-6125
Éditeur: Kluwer Academic Publishers
DOI: 10.1007/s10994-024-06574-3

Shared pathway-specific network mechanisms of dopamine and deep brain stimulation for the treatment of parkinson\textquoterights disease

Auteurs: T. S. Binns, R. M. Köhler, J. Vanhoecke, M. Chikermane, M. Gerster, T. Merk, F. Pellegrini, J. L. Busch, J. G. V. Habets, A. Cavallo, J.-C. Beyer, B. Al-Fatly, N. Li, A. Horn, P. Krause, K. Faust, G.-H. Schneider, S. Haufe, A. A. Kühn, and W.-J. Neumann
Publié dans: Nature Communications, 2025, ISSN 2041-1723
Éditeur: Nature Publishing Group

Unification of sparse Bayesian learning algorithms for electromagnetic brain imaging with the majorization minimization framework

Auteurs: Ali Hashemi, Chang Cai, Gitta Kutyniok, Klaus-Robert Müller, Srikantan S. Nagarajan, Stefan Haufe
Publié dans: NeuroImage, Numéro 239, 2021, Page(s) 118309, ISSN 1053-8119
Éditeur: Academic Press
DOI: 10.1016/j.neuroimage.2021.118309

Scrutinizing XAI using linear ground-truth data with suppressor variables

Auteurs: Rick Wilming, Céline Budding, Klaus-Robert Müller, Stefan Haufe
Publié dans: Machine Learning, Numéro 111, 2022, Page(s) 1903-1923, ISSN 1573-0565
Éditeur: Springer
DOI: 10.1007/s10994-022-06167-y

Cortical networks of parkinsonian gait: a metabolic and functional connectivity study

Auteurs: Franziska Pellegrini, Nicoló G. Pozzi, Chiara Palmisano, Giorgio Marotta, Andreas Buck, Stefan Haufe, Ioannis U. Isaias
Publié dans: Annals of Clinical and Translational Neurology, Numéro 11 (10), 2024, Page(s) 2597 – 2608, ISSN 2328-9503
Éditeur: Wiley
DOI: 10.1101/2023.10.09.23296653

Dopamine and deep brain stimulation accelerate the neural dynamics of volitional action in Parkinson's disease

Auteurs: Richard M Köhler, Thomas S Binns, Timon Merk, Guanyu Zhu, Zixiao Yin, Baotian Zhao, Meera Chikermane, Jojo Vanhoecke, Johannes L Busch, Jeroen G V Habets, Katharina Faust, Gerd-Helge Schneider, Alessia Cavallo, Stefan Haufe, Jianguo Zhang, Andrea A Kühn, John-Dylan Haynes, Wolf-Julian Neumann
Publié dans: Brain, Numéro 147, 2024, Page(s) 3358-3369, ISSN 0006-8950
Éditeur: Oxford University Press
DOI: 10.1093/brain/awae219

Pallidal Recordings in Chronically Implanted Dystonic Patients: Mitigation of Tremor-Related Artifacts

Auteurs: Jasmin Del Vecchio Del Vecchio; Ibrahem Hanafi; Nicoló Gabriele Pozzi; Philipp Capetian; Ioannis U. Isaias; Stefan Haufe; Chiara Palmisano
Publié dans: Bioengineering, Numéro 10(2), 2023, Page(s) 476, ISSN 2306-5354
Éditeur: MDPI
DOI: 10.3390/bioengineering10040476

Robust estimation of noise for electromagnetic brain imaging with the champagne algorithm

Auteurs: Chang Cai, Ali Hashemi, Mithun Diwakar, Stefan Haufe, Kensuke Sekihara, Srikantan S. Nagarajan
Publié dans: NeuroImage, Numéro 225, 2021, Page(s) 117411, ISSN 1053-8119
Éditeur: Academic Press
DOI: 10.1016/j.neuroimage.2020.117411

Joint Learning of Full-Structure Noise in Hierarchical Bayesian Regression Models

Auteurs: Ali Hashemi; Chang Cai; Yijing Gao; Sanjay Ghosh; Klaus-Robert Müller; Srikantan S. Nagarajan; Stefan Haufe
Publié dans: IEEE Transactions on Medical Imaging, Numéro 43(2), 2022, Page(s) 610 - 624, ISSN 0278-0062
Éditeur: Institute of Electrical and Electronics Engineers
DOI: 10.1109/tmi.2022.3224085

EXACT: Towards a platform for empirically benchmarking machine learning model explanation methods

Auteurs: Benedict Clark, Rick Wilming, Artur Dox, Paul Eschenbach, Sami Hached, Daniel Jin Wodke, Michias Taye Zewdie, Uladzislau Bruila, Marta Oliveira, Hjalmar Schulz, Luca Matteo Cornils, Danny Panknin, Ahcène Boubekki, Stefan Haufe
Publié dans: Measurement: Sensors, 2025, Page(s) 101794, ISSN 2665-9174
Éditeur: Elsevier
DOI: 10.1016/j.measen.2024.101794

Quantifying the Effect of Demixing Approaches on Directed Connectivity Estimated Between Reconstructed EEG Sources

Auteurs: Alessandra Anzolin, Paolo Presti, Frederik Van De Steen, Laura Astolfi, Stefan Haufe, Daniele Marinazzo
Publié dans: Brain Topography, Numéro 32/4, 2019, Page(s) 655-674, ISSN 0896-0267
Éditeur: Kluwer Academic/Plenum Publishers
DOI: 10.1007/s10548-019-00705-z

Gait Event Prediction Using Surface Electromyography in Parkinsonian Patients

Auteurs: Stefan Haufe; Ioannis U. Isaias; Franziska Pellegrini; Chiara Palmisano
Publié dans: Bioengineering, Numéro 10(2), 2023, Page(s) 212, ISSN 2306-5354
Éditeur: MDPI
DOI: 10.3390/bioengineering10020212

Relationship between regional white matter hyperintensities and alpha oscillations in older adults

Auteurs: Deniz Kumral, Elena Cesnaite, FraukeBeyer, Simon M. Hofmann, Tilman Hensch, Christian Sander, Ulrich Hegerl, Stefan Haufe, Arno Villringer, A. Veronica Witte, Vadim V. Nikulin
Publié dans: Neurobiology of Aging, Numéro 01974580, 2022, Page(s) 1-11, ISSN 0197-4580
Éditeur: Elsevier BV
DOI: 10.1016/j.neurobiolaging.2021.10.006

Empirical Bayesian localization of event-related time-frequency neural activity dynamics

Auteurs: Chang Cai, Leighton Hinkley, Yijing Gao, Ali Hashemi, Stefan Haufe, Kensuke Sekihara, Srikantan S. Nagarajan
Publié dans: NeuroImage, Numéro 258, 2024, Page(s) 119369, ISSN 1053-8119
Éditeur: Academic Press
DOI: 10.1016/j.neuroimage.2022.119369

Sensorimotor Functional Connectivity: A Neurophysiological Factor Related to BCI Performance

Auteurs: Carmen Vidaurre, Stefan Haufe, Tania Jorajuría, Klaus-Robert Müller, Vadim V. Nikulin
Publié dans: Frontiers in Neuroscience, Numéro 14, 2020, ISSN 1662-453X
Éditeur: Frontiers
DOI: 10.3389/fnins.2020.575081

Test–retest reliability of resting‐state EEG in young and older adults

Auteurs: Popov, Tzvetan; Tröndle, Marius; Barańczuk-Turska, Zofia; Pfeiffer, Christian; Haufe, Stefan; Langer, Nicolas
Publié dans: Psychophysiology, Numéro 60, 2023, Page(s) e14268, ISSN 0048-5772
Éditeur: Blackwell Publishing Inc.
DOI: 10.1111/psyp.14268

A benchmark for prediction of psychiatric multimorbidity from resting EEG data in a large pediatric sample

Auteurs: Langer, Nicolas; Plomecka, Martyna Beata; Tröndle, Marius; Negi, Anuja; Popov, Tzvetan; Milham, Michael; Haufe, Stefan
Publié dans: NeuroImage, Numéro 258, 2022, Page(s) 119348, ISSN 1053-8119
Éditeur: Academic Press
DOI: 10.1016/j.neuroimage.2022.119348

Temporal Signatures of Criticality in Human Cortical Excitability as Probed by Early Somatosensory Responses

Auteurs: Tilman Stephani, Gunnar Waterstraat, Stefan Haufe, Gabriel Curio, Arno Villringer, Vadim V. Nikulin
Publié dans: The Journal of Neuroscience, Numéro 40/34, 2020, Page(s) 6572-6583, ISSN 0270-6474
Éditeur: Society for Neuroscience
DOI: 10.1523/jneurosci.0241-20.2020

Abstracts of Neural Traces 2024 - Advanced M/EEG Methods and Clinical Applications Workshop

Auteurs: Stefan Haufe, Laura Marzetti, Nikita Agarwal, Margarita Sison, Tien Dung Nguyen, (Editors)
Publié dans: 2025
Éditeur: TU Berlin
DOI: 10.14279/depositonce-21073

Advances in hierarchical Bayesian learning with applications to neuroimaging

Auteurs: Ali Hashemi
Publié dans: 2023
Éditeur: TU Berlin
DOI: 10.14279/depositonce-18490

Validated novel pipelines to study linear and non-linear be-tween-site functional brain interaction with application in Parkin-sonian gait

Auteurs: Franziska Pellegrini
Publié dans: 2025
Éditeur: FU Berlin

Estimating Time Delays between Signals under Mixed Noise Influence with Novel Cross- and Bispectral Methods

Auteurs: Tin Jurhar, Franziska Pellegrini, Ana I. Nuñes del Toro, Tilman Stephani, Guido Nolte, Stefan Haufe
Publié dans: ArXiv preprint server, 2025
Éditeur: ArXiv preprint server

Effect of MRI Defacing on EEG Forward and Inverse Modeling

Auteurs: Angela Mitrovska, Stefan Haufe
Publié dans: biorXiv preprint server, 2025
Éditeur: Cold Spring Harbor Laboratory
DOI: 10.1101/2025.03.11.642561

How forgiving are M/EEG inverse solutions to noise level misspecification? An excursion into the BSI-Zoo

Auteurs: Anuja Negi, Stefan Haufe, Alexandre Gramfort, Ali Hashemi
Publié dans: biorXiv preprint server, 2025
Éditeur: Cold Spring Harbor Laboratory
DOI: 10.1101/2025.03.12.642831

Publications

Partager cette page Partager cette page sur les réseaux sociaux

Télécharger Télécharger le contenu de la page