Molecular Identification of Plants

Deliverables

Websites, patent fillings, videos etc. (1)

Website online

Website online, www.plantid.uio.no

Documents, reports (10)

Translation of molecular data into quantitative consumer information

Translation of molecular data into quantitative consumer information ESR 6 7 deliverables 64 74

50+ Publications in peer-reviewed journals

50 Publications in peerreviewed journals From experience we can say that several of these might be published later than M48

Protocol for biological, chemical and pharmacological assessment of TCMs

Protocol for biological chemical and pharmacological assessment of TCMs ESR 5 deliverable 53

Customized high-throughput sequencing protocol for unidentified tree species

Customized highthroughput sequencing protocol for unidentified tree species ESR 12 deliverable 123

Red-list assessment of selected species completed

Redlist assessment of selected species completed ESR 3 deliverable 32

Protocol for Bar-HRM protocol for plant based products

Protocol for BarHRM protocol for plant based products ESR 13 deliverable 134

Research brief on molecular identification of plants

Textbook on Molecular Identification of Plants

Protocol for diet analysis using shotgun metabarcoding

Protocol for diet analysis using shotgun metabarcoding ESR 4 deliverable 44

Recommendation to EMA and EFSA on authentication of herbal TCMs

Recommendation to EMA and EFSA on authentication of herbal TCMs ESR 5 deliverable 54

Other (12)

6 Supervisory Board Meetings

45+ Outreach actions

45 Outreach actions

Supervisory Board of the network

Reference database for accurate molecular identification

Reference database for accurate molecular identification ESR 3 12 deliverables 33 124

Final dissemination conference

Kick-off Meeting

7 Network-wide training activities

7 Networkwide training activities

15 Recruitments completed

45+ Oral & poster presentation at conferences

45 Oral poster presentation at conferences

15 PhDs awarded

15 PhDs awarded The duration of PhD programs varies per beneficiary but we expect the first PhDs to be awarded from M43 onwards

15 Open positions announced

DNA barcodes reference sequences available

DNA barcodes reference sequences available. ESR 4, 6, 7, 15 deliverables 4.2, 6.1, 7.1, 15.1

Open Research Data Pilot (1)

Data Management Plan

Publications

Peer reviewed articles (11)

DNAqua‐Net conference unites participants from around the world with the quest to standardize and implement DNA‐based aquatic biomonitoring

Author(s): Kristine Bohmann, Physilia Chua, Luke E. Holman, Christina Lynggaard
Published in: Environmental DNA, 2021, ISSN 2637-4943
Publisher: John Wiley and Sons
DOI: 10.1002/edn3.207

Neural networks for increased accuracy of allergenic pollen monitoring

Author(s): Marcel Polling, Chen Li, Lu Cao, Fons Verbeek, Letty A. de Weger, Jordina Belmonte, Concepción De Linares, Joost Willemse, Hugo de Boer, Barbara Gravendeel
Published in: Scientific Reports, 11/1, 2021, ISSN 2045-2322
Publisher: Nature Publishing Group
DOI: 10.1038/s41598-021-90433-x

Description and evolution of wood anatomical characters in the ebony wood genus Diospyros and its close relatives (Ebenaceae): a first step towards combatting illegal logging

Author(s): Mehrdad Jahanbanifard, Vicky Beckers, Gerald Koch, Hans Beeckman, Barbara Gravendeel, Fons Verbeek, Pieter Baas, Carlijn Priester, Frederic Lens
Published in: IAWA Journal, 1, 2020, Page(s) 1-43, ISSN 0928-1541
Publisher: International Association of Wood Anatomists
DOI: 10.1163/22941932-bja10040

Hidden Rice Diversity in the Guianas

Author(s): Tinde van Andel; Tinde van Andel; Margaretha A. Veltman; Alice Bertin; Harro Maat; Thomas Polime; Derk Hille Ris Lambers; Jerry Tjoe Awie; Hugo J. de Boer; Hugo J. de Boer; Vincent Manzanilla
Published in: Frontiers in Plant Science, Vol 10 (2019), 3, 2019, ISSN 1664-462X
Publisher: Frontiers Media S. A.
DOI: 10.1101/562769

Metagenomics: A viable tool for reconstructing herbivore diet

Author(s): Physilia Y. S. Chua, Alex Crampton‐Platt, Youri Lammers, Inger G. Alsos, Sanne Boessenkool, Kristine Bohmann
Published in: Molecular Ecology Resources, 2021, ISSN 1755-098X
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/1755-0998.13425

Metabarcoding reveals low fidelity and presence of toxic species in short chain-of-commercialization of herbal products

Author(s): Bastien Anthoons, Ioanna Karamichali, Audun Schrøder-Nielsen, Andreas D. Drouzas, Hugo de Boer, Panagiotis Madesis
Published in: Journal of Food Composition and Analysis, 97, 2021, Page(s) 103767, ISSN 0889-1575
Publisher: Academic Press
DOI: 10.1016/j.jfca.2020.103767

Molecular dietary analyses of western capercaillies ( Tetrao urogallus ) reveal a diverse diet

Author(s): Physilia Ying Shi Chua, Youri Lammers, Emmanuel Menoni, Torbjørn Ekrem, Kristine Bohmann, Sanne Boessenkool, Inger Greve Alsos
Published in: Environmental DNA, 2021, ISSN 2637-4943
Publisher: Wiley and Sons Ltd
DOI: 10.1002/edn3.237

Historical chemical annotations of Cinchona bark collections are comparable to results from current day high-pressure liquid chromatography technologies

Author(s): Nataly Allasi Canales, Tobias Nikolaj Gress Hansen, Claus Cornett, Kim Walker, Felix Driver, Alexandre Antonelli, Carla Maldonado, Mark Nesbitt, Christopher J. Barnes, Nina Rønsted
Published in: Journal of Ethnopharmacology, 249, 2019, Page(s) 112375, ISSN 0378-8741
Publisher: Elsevier BV
DOI: 10.1016/j.jep.2019.112375

A large-scale species level dated angiosperm phylogeny for evolutionary and ecological analyses

Author(s): Steven Janssens, Thomas L.P. Couvreur, Arne Mertens, Gilles Dauby, Leo-Paul Dagallier, Samuel Vanden Abeele, Filip Vandelook, Maurizio Mascarello, Hans Beeckman, Marc Sosef, Vincent Droissart, Michelle van der Bank, Olivier Maurin, William Hawthorne, Cicely Marshall, Maxime Réjou-Méchain, Denis Beina, Fidele Baya, Vincent Merckx, Brecht Verstraete, Olivier Hardy
Published in: Biodiversity Data Journal, 8, 2020, ISSN 1314-2828
Publisher: Pensoft
DOI: 10.3897/bdj.8.e39677

A Customised Target Capture Sequencing Tool for Molecular Identification of Aloe Vera and Relatives

Author(s): Yannick Woudstra; Juan Viruel; Martin Fritzsche; Thomas Bleazard; Ryan Mate; Caroline Howard; Nina Rønsted; Olwen M. Grace
Published in: Scientific Reports, 1, 2021, ISSN 2045-2322
Publisher: Nature Publishing Group
DOI: 10.21203/rs.3.rs-537180/v1

Multiproxy analysis of permafrost preserved faeces provides an unprecedented insight into the diets and habitats of extinct and extant megafauna

Author(s): Marcel Polling, Anneke T.M. ter Schure, Bas van Geel, Tom van Bokhoven, Sanne Boessenkool, Glen MacKay, Bram W. Langeveld, María Ariza, Hans van der Plicht, Albert V. Protopopov, Alexei Tikhonov, Hugo de Boer, Barbara Gravendeel
Published in: Quaternary Science Reviews, 267, 2021, Page(s) 107084, ISSN 0277-3791
Publisher: Pergamon Press Ltd.
DOI: 10.1016/j.quascirev.2021.107084