Paradigm for Novel Dynamic Oceanic Resource Assessments

Livrables

Management options and recommendations
New causal data and knowledge, including first trial of self-sampling programme and peer-reviewed, case-specific publications on seabream, rays, red mullet, rose shrimp, round goby and tuna

New causal data and knowledge including first trial of selfsampling programme and peerreviewed casespecific publications on seabream rays red mullet rose shrimp round goby and tuna

Estimate of welfare outcomes under pretty good yield policies, including article in peer-reviewed journal and research brief aimed at policy makers and industry policy makers and industry
Causal data and knowledge based on existing data
Improved assessment models for the different species in the case study regions including improved biological knowledge
Final report on PANDORA training courses conducted including participate feedback
Direct drivers for long-term profitability and employment of European fleets identified and quantified, including article in peer-reviewed journal and research brief aimed at policy makers and industry

Direct drivers for longterm profitability and employment of European fleets identified and quantified including article in peerreviewed journal and research brief aimed at policy makers and industry

Improved short term forecasts that make use of biological knowledge relevant for short-term development of the stock in the case studies
Improved management scenarios
Report on (second) self-sampling (trial) including valuation

Report on second selfsampling trial including valuation

Strategic projections in the case study regions for the different, specific types of projection methodology
Impacts of new management systems on market supply and food security identified and quantified, including article in peer-reviewed journal and research brief aimed at policy makers and industry

Impacts of new management systems on market supply and food security identified and quantified including article in peerreviewed journal and research brief aimed at policy makers and industry

Key management needs and scenarios
Documentation and final user guide of PANDORA Toolbox
Scoping of regional management needs
Review of available genetic information on population structuring in exploited species including pipeline for implementation of genetic data into the general framework for resource assessment

Data management report

Publications

Integrating reproductive ecology, early life dynamics and mesoscale oceanography to improve albacore tuna assessment in the Western Mediterranean

Auteurs: Diego Alvarez-Berastegui, Sámar Saber, G. Walter Ingram, Lara Díaz-Barroso, Patricia Reglero, David Macías, Salvador García-Barcelona, Josetxu Ortiz de Urbina, Joaquín Tintoré, Francisco Alemany
Publié dans: Fisheries Research, Numéro 208, 2018, Page(s) 329-338, ISSN 0165-7836
Éditeur: Elsevier BV
DOI: 10.1016/j.fishres.2018.08.014

Atlantic bluefin tuna spawn early to avoid metabolic meltdown in larvae

Auteurs: Øyvind Fiksen, Patricia Reglero
Publié dans: Ecology, Numéro 19399170, 2021, Page(s) e03568, ISSN 1939-9170
Éditeur: Wiley
DOI: 10.1002/ecy.3568

Using machine learning to link spatiotemporal information to biological processes in the ocean: a case study for North Sea cod recruitment

Auteurs: B Kühn, MH Taylor, A Kempf
Publié dans: Marine Ecology Progress Series, Numéro 664, 2021, Page(s) 1-22, ISSN 0171-8630
Éditeur: Inter-Research Science Publishing
DOI: 10.3354/meps13689

Small pelagic fish in the new millennium: A bottom-up view of global research effort

Auteurs: Myron A. Peck, Jürgen Alheit, Arnaud Bertrand, Ignacio A. Catalán, Susana Garrido, Marta Moyano, Ryan R. Rykaczewski, Akinori Takasuka, Carl D. van der Lingen
Publié dans: Progress in Oceanography, Numéro 191, 2021, Page(s) 102494, ISSN 0079-6611
Éditeur: Pergamon Press Ltd.
DOI: 10.1016/j.pocean.2020.102494

LeMaRns: A Length-based Multi-species analysis by numerical simulation in R

Auteurs: Michael A. Spence, Hayley J. Bannister, Johnathan E. Ball, Paul J. Dolder, Christopher A. Griffiths, Robert B. Thorpe
Publié dans: PLOS ONE, Numéro 15/2, 2020, Page(s) e0227767, ISSN 1932-6203
Éditeur: Public Library of Science
DOI: 10.1371/journal.pone.0227767

Close-kin mark–recapture abundance estimation: practical insights and lessons learned

Auteurs: Verena M Trenkel; Grégory Charrier; Pascal Lorance; Mark V Bravington
Publié dans: ICES Journal Of Marine Science, Numéro 79/2, 2022, Page(s) 413-422, ISSN 1054-3139
Éditeur: Oxford University Press
DOI: 10.1093/icesjms/fsac002

The Use of a Length-Structured Multispecies Model Fitted Directly to Data in Near-Real Time as a Viable Tool for Advice

Auteurs: Michael A. Spence, Paul J. Dolder, Richard Nash and Robert B. Thorpe
Publié dans: Frontiers in Marine Science, Numéro 8, 2021, Page(s) 700534, ISSN 2296-7745
Éditeur: Frontiers
DOI: 10.3389/fmars.2021.700534

Alternative seafood marketing systems foster transformative processes in Mediterranean fisheries

Auteurs: Sílvia Gómez, Francesc Maynou
Publié dans: Marine Policy, Numéro 127, 2021, Page(s) 104432, ISSN 0308-597X
Éditeur: Pergamon Press Ltd.
DOI: 10.1016/j.marpol.2021.104432

Effects of temperature on physiological performance and behavioral thermoregulation in an invasive fish, the round goby

Auteurs: Emil A. F. Christensen, Tommy Norin, Iren Tabak, Mikael van Deurs, Jane W. Behrens
Publié dans: Journal of Experimental Biology, Numéro 224(1), 2021, ISSN 0022-0949
Éditeur: The Company of Biologists Ltd.
DOI: 10.1242/jeb.237669

Small fish eat smaller fish: A model of interaction strength in early life stages of two tuna species

Auteurs: Daniel Ottmann, Patricia Reglero, Francisco Alemany, Diego Alvarez-Berastegui, Melissa Martín, Øyvind Fiksen
Publié dans: Limnology and Oceanography Letters, Numéro 7/3, 2022, Page(s) 227-234, ISSN 2378-2242
Éditeur: Wiley
DOI: 10.1002/lol2.10241

Synthesizing Empirical and Modelling Studies to Predict Past and Future Primary Production in the North Sea

Auteurs: Michael A. Spence, Christopher P. Lynam, Robert B. Thorpe, Ryan F. Heneghan, Paul J. Dolder
Publié dans: Frontiers in Marine Science, Numéro 9, 2022, Page(s) 828623, ISSN 2296-7745
Éditeur: Frontiers
DOI: 10.3389/fmars.2022.828623

Sale price flexibilities of Mediterranean hake and red shrimp

Auteurs: F. Maynou
Publié dans: Marine Policy, Numéro 136, 2022, Page(s) 104904, ISSN 0308-597X
Éditeur: Pergamon Press Ltd.
DOI: 10.1016/j.marpol.2021.104904

The impacts of climate change on the biomechanics of animals

Auteurs: Paolo Domenici, Frank Seebacher
Publié dans: Conservation Physiology, Numéro 8/1, 2020, ISSN 2051-1434
Éditeur: Oxford University Press
DOI: 10.1093/conphys/coz102

Diet and feeding behaviour of albacore Thunnus alalunga in the western Mediterranean Sea during the spawning period

Auteurs: Maria Valls, Sámar Saber, María José Gómez, Patricia Reglero, Salvatore Mele
Publié dans: Fish Biology, Numéro 10958649, 2022, Page(s) 203-217, ISSN 1095-8649
Éditeur: John Wiley & Son
DOI: 10.1111/jfb.14935

Economic, sociocultural and ecological dimensions of fishing capacity in NW Mediterranean fisheries

Auteurs: Sílvia Gómez, Francesc Maynou
Publié dans: Ocean & Coastal Management, Numéro 197, 2020, Page(s) 105323, ISSN 0964-5691
Éditeur: Pergamon Press Ltd.
DOI: 10.1016/j.ocecoaman.2020.105323

Stakeholder engagement vs. social distancing—how does the Covid-19 pandemic affect participatory research in EU marine science projects?

Auteurs: Vera Köpsel, Gabriel de Moura Kiipper, Myron A. Peck
Publié dans: Maritime Studies, 2021, ISSN 1872-7859
Éditeur: Centre for Maritime Research, MARE
DOI: 10.1007/s40152-021-00223-4

Challenges to fisheries advice and management due to stock recovery

Auteurs: Rob van Gemert, Ken H Andersen
Publié dans: ICES Journal of Marine Science, Numéro 75/6, 2018, Page(s) 1864–1870, ISSN 1054-3139
Éditeur: Oxford University Press
DOI: 10.1093/icesjms/fsy084

Size-based theory for fisheries advice

Auteurs: Ken H Andersen
Publié dans: ICES Journal of Marine Science, Numéro 77/7-8, 2020, Page(s) 2445–2455, ISSN 1054-3139
Éditeur: Oxford University Press
DOI: 10.1093/icesjms/fsaa157

Evolution of fishing capacity in a Mediterranean fishery in the first two decades of the 21st c.

Auteurs: Francesc Maynou
Publié dans: Ocean & Coastal Management, Numéro 192, 2020, Page(s) 105190, ISSN 0964-5691
Éditeur: Pergamon Press Ltd.
DOI: 10.1016/j.ocecoaman.2020.105190

The Response of North Sea Ecosystem Functional Groups to Warming and Changes in Fishing

Auteurs: Robert B. Thorpe, Nina L. Arroyo, Georges Safi, Nathalie Niquil, Izaskun Preciado, Michael Heath, Matthew C. Pace, Christopher P. Lynam
Publié dans: Frontiers in Marine Science, Numéro 9, 2022, Page(s) 841909, ISSN 2296-7745
Éditeur: Frontiers
DOI: 10.3389/fmars.2022.841909

Integrated Social-Economic-Ecological Modeling for Fisheries: The ECOST Model

Auteurs: Pierre Failler, Haoran Pan, Negar Akbari
Publié dans: Frontiers in Marine Science, Numéro 8, 2022, Page(s) 704371, ISSN 2296-7745
Éditeur: Frontiers Media S.A.
DOI: 10.3389/fmars.2021.704371

Parasite load of Atlantic cod Gadus morhua in the Baltic Sea assessed by the liver category method, and associations with infection density and critical condition

Auteurs: Marie Plambech Ryberg, Bastian Huwer, Anders Nielsen, Jan Dierking, Kurt Buchmann, Maria Sokolova, Uwe Krumme, Jane W. Behrens
Publié dans: Fisheries Management and Ecology, Numéro 13652400, 2021, Page(s) 88-99, ISSN 1365-2400
Éditeur: Wiley
DOI: 10.1111/fme.12516

Co‐viability of a Mediterranean demersal fishery affected by the discard ban under alternative management scenarios

Auteurs: Francesc Maynou
Publié dans: Fisheries Management and Ecology, Numéro 26/4, 2019, Page(s) 345-353, ISSN 0969-997X
Éditeur: Blackwell Publishing Inc.
DOI: 10.1111/fme.12365

Ecological-economic sustainability of the Baltic cod fisheries under ocean warming and acidification

Auteurs: Rudi Voss, Martin F. Quaas, Martina H. Stiasny, Martin Hänsel, Guilherme A. Stecher Justiniano Pinto, Andreas Lehmann, Thorsten B.H. Reusch, Jörn O. Schmidt
Publié dans: Journal of Environmental Management, Numéro 238, 2019, Page(s) 110-118, ISSN 0301-4797
Éditeur: Academic Press
DOI: 10.1016/j.jenvman.2019.02.105

Accounting for ocean connectivity and hydroclimate in fish recruitment fluctuations within transboundary metapopulations

Auteurs: Manuel Hidalgo, Vincent Rossi, Pedro Monroy, Enrico Ser‐Giacomi, Emilio Hernández‐García, Beatriz Guijarro, Enric Massutí, Francisco Alemany, Angelique Jadaud, José Luis Perez, Patricia Reglero
Publié dans: Ecological Applications, Numéro 29/5, 2019, ISSN 1051-0761
Éditeur: Ecological Society of America
DOI: 10.1002/eap.1913

Spatiotemporal dynamics of predators and survival of marine fish early life stages: Atlantic cod (Gadus morhua) in the North Sea

Auteurs: Anna Akimova, Marc Hufnagl, Myron A. Peck
Publié dans: Progress in Oceanography, Numéro 176, 2019, Page(s) 102121, ISSN 0079-6611
Éditeur: Pergamon Press Ltd.
DOI: 10.1016/j.pocean.2019.102121

Spatially resolved past and projected changes of the suitable thermal habitat of North Sea cod (Gadus morhua) under climate change

Auteurs: Ismael Núñez-Riboni, Marc H Taylor, Alexander Kempf, Miriam Püts, Moritz Mathis
Publié dans: ICES Journal of Marine Science, 2019, ISSN 1054-3139
Éditeur: Oxford University Press
DOI: 10.1093/icesjms/fsz132

Comparing conceptual frameworks for a fish community MSY (FCMSY) using management strategy evaluation—an example from the North Sea

Auteurs: Robert B Thorpe, José A A De Oliveira
Publié dans: ICES Journal of Marine Science, Numéro 76/4, 2019, Page(s) 813-823, ISSN 1054-3139
Éditeur: Oxford University Press
DOI: 10.1093/icesjms/fsz015

Spatial patterns in infection of cod Gadus morhua with the seal-associated liver worm Contracaecum osculatum from the Skagerrak to the central Baltic Sea

Auteurs: M Sokolova, K Buchmann, B Huwer, PW Kania, U Krumme, A Galatius, J Hemmer-Hansen, JW Behrens
Publié dans: Marine Ecology Progress Series, Numéro 606, 2018, Page(s) 105-118, ISSN 0171-8630
Éditeur: Inter-Research Science Publishing
DOI: 10.3354/meps12773

What is multispecies MSY? A worked example from the North Sea

Auteurs: Robert B. Thorpe
Publié dans: Journal of Fish Biology, 2019, ISSN 0022-1112
Éditeur: Blackwell Publishing Inc.
DOI: 10.1111/jfb.13967

Determining long‐term changes in a skate assemblage with aggregated landings and limited species data

Auteurs: Florianne Marandel, Pascal Lorance, Verena M. Trenkel
Publié dans: Fisheries Management and Ecology, Numéro 26/4, 2019, Page(s) 365-373, ISSN 0969-997X
Éditeur: Blackwell Publishing Inc.
DOI: 10.1111/fme.12367

Estimating effective population size of large marine populations, is it feasible?

Auteurs: Florianne Marandel, Pascal Lorance, Olivier Berthelé, Verena M. Trenkel, Robin S. Waples, Jean-Baptiste Lamy
Publié dans: Fish and Fisheries, Numéro 20/1, 2019, Page(s) 189-198, ISSN 1467-2960
Éditeur: Blackwell Publishing Inc.
DOI: 10.1111/faf.12338

First estimates of metabolic rate in Atlantic bluefin tuna larvae

Auteurs: Edurne Blanco, Patricia Reglero, Aurelio Ortega, Arild Folkvord, Fernando Gándara, Alma Hernández de Rojas, Marta Moyano
Publié dans: Journal of Fish Biology, Numéro 97/5, 2020, Page(s) 1296-1305, ISSN 0022-1112
Éditeur: Blackwell Publishing Inc.
DOI: 10.1111/jfb.14473

Spawning site distribution of a bluefin tuna reduces jellyfish predation on early life stages

Auteurs: Daniel Ottmann; Øyvind Fiksen; Melissa Martín; Francisco Alemany; Laura Prieto; Diego Alvarez-Berastegui; Patricia Reglero
Publié dans: Limnology and Oceanography, Numéro 66/10, 2021, Page(s) 3669-3681, ISSN 1939-5590
Éditeur: John Wiley & Sons, Inc.
DOI: 10.1002/lno.11908

Commentary: Combining Ecosystem and Single-Species Modeling to Provide Ecosystem-Based Fisheries Management Advice Within Current Management Systems

Auteurs: Robert B. Thorpe, Michael A. Spence, Paul J. Dolder and Richard D. M. Nash
Publié dans: Frontiers in Marine Science, Numéro 8, 2021, Page(s) 707841, ISSN 2296-7745
Éditeur: Frontiers
DOI: 10.3389/fmars.2021.707841

Trade-offs between employment and profitability in a MediterraneanSea mixed bottom trawl fishery

Auteurs: F. Maynou
Publié dans: Regional Studies in Marine Science, Numéro 48, 2021, Page(s) 102020, ISSN 2352-4855
Éditeur: Elsevier
DOI: 10.1016/j.rsma.2021.102020

Disentangling the components of coastal fish biodiversity in southern Brittany by applying an environmental DNA approach

Auteurs: Rozanski Romane, Trenkel Verena, Lorance Pascal, Valentini Alice, Dejean Tony, Pellissier Loïc, Eme David, Albouy Camille
Publié dans: Environmental DNA, Numéro Early View, 2022, ISSN 2637-4943
Éditeur: John Wiley & Sons Ltd
DOI: 10.1002/edn3.305

Estimating effective population size using RADseq: Effects of SNP selection and sample size

Auteurs: Florianne Marandel, Grégory Charrier, Jean‐Baptiste Lamy, Sabrina Le Cam, Pascal Lorance, Verena M. Trenkel
Publié dans: Ecology and Evolution, Numéro 10/4, 2020, Page(s) 1929-1937, ISSN 2045-7758
Éditeur: John Wiley and Sons Ltd
DOI: 10.1002/ece3.6016

Methods for identifying and interpreting sex‐linked SNP markers and carrying out sex assignment: application to thornback ray ( Raja clavata )

Auteurs: Verena M. Trenkel, Pierre Boudry, Véronique Verrez‐Bagnis, Pascal Lorance
Publié dans: Molecular Ecology Resources, Numéro 20/6, 2020, Page(s) 1610-1619, ISSN 1755-098X
Éditeur: Blackwell Publishing Inc.
DOI: 10.1111/1755-0998.13225

Balancing ecology, economy and culture in fisheries policy: Participatory research in the Western Mediterranean demersal fisheries management plan

Auteurs: Sílvia Gómez, Francesc Maynou
Publié dans: Journal of Environmental Management, Numéro 291, 2021, Page(s) 112728, ISSN 0301-4797
Éditeur: Academic Press
DOI: 10.1016/j.jenvman.2021.112728

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